Cheilinus undulatus (humphead wrasse): 121516164
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Entry
121516164 CDS
T07473
Symbol
polr2b
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
cud
Cheilinus undulatus (humphead wrasse)
Pathway
cud03020
RNA polymerase
cud03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cud00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
121516164 (polr2b)
09124 Replication and repair
03420 Nucleotide excision repair
121516164 (polr2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cud03021
]
121516164 (polr2b)
03400 DNA repair and recombination proteins [BR:
cud03400
]
121516164 (polr2b)
Enzymes [BR:
cud01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
121516164 (polr2b)
Transcription machinery [BR:
cud03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
121516164 (polr2b)
DNA repair and recombination proteins [BR:
cud03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
121516164 (polr2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
DUF5817
Motif
Other DBs
NCBI-GeneID:
121516164
NCBI-ProteinID:
XP_041653191
LinkDB
All DBs
Position
10:47409665..47426741
Genome browser
AA seq
1138 aa
AA seq
DB search
MYDQDEDNQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVE
DAPPIDLQAEAQHTSGEVEDPPRYLLKFEQIYLSKPTHWERDGAPSPMMPNEARLRNLTY
SAPLYVDITKTITKEGEDQLQTQHQKTFIGKIPIMLRSTYCLLSGLTDRDLCELNECPLD
PGGYFIINGSEKVLIAQEKMATNTVYVFAKKDSKYAYTGECRSCLENSSRPTSTIWVSMM
ARGGQGVKKSAIGQRIVSTLPYIRQEVPIIIVFRALGFVSDRDILEHIIYDFDDPEMMEM
KYAKEVLQKEMLPHVGVSDFCETKKAYFSGYMVHRLLLAALGRRELDDRDHYGNKRLDLA
GPLLAFLFRGMFKNLLKEIRIYAQKFIDRGKDFNLELAIKTRIISDGLKYSLATGNWGDV
KKAHQARAGVSQVLNRLTFASTLSHLRRVNSPIGRDGKLAKPRQLHNTLWGMVCPAETPE
GHAVGLVKNLALMAYISVGSQPSPILEFLEEWSMENLEEISPAAIADATKIFVNGCWVGI
HKDPEQLMNTLRKLRRQMDIIVSEVSMIRDIREREIRIYTDAGRICRPLLIVEKQKLLLK
RRHIDQLKEREYNNYSWQDLVASGVVEYIDTLEEETVMLAMTPDDLQEKGVAYCSTYTHC
EIHPSMILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPQK
PLVTTRSMEYLRFRELPAGINSIVAIASYTGYNQEDSVIMNRSAVDRGFFRSVFYRSYKE
QESKKGFDQEEIFEKPTRETCSGMRHAIYDKLDDDGLIAPGVRVSGEDVIIGKTVTLPEN
DDELDSTNRRYTKRDCSTFLRTSETGIVDQVMVTLNQEGYKFCKIRVRSVRIPQIGDKFA
SRHGQKGTCGIQYRQEDMPFTCEGITPDIIINPHAIPSRMTVGHLIECLQGKVSANKGEI
GDATPFNDAVNVQKVSNLLSEYGYHLRGNEVLYNGFTGRKLTSQIFIGPTYYQRLKHMVD
DKIHSRARGPVQILNRQPMEGRSRDGGLRFGEMERDCQIAHGAAQFLRERLFEASDPYQV
HVCNLCGLMAIANTRTHTYECRGCRNKTQISLVRMPYACKLLFQELMSMSIAPRMMTS
NT seq
3417 nt
NT seq
+upstream
nt +downstream
nt
atgtacgaccaggacgaagataaccagtacgatgaggatgatgatgaaatcactccagat
ctgtggcaggaagcgtgctggatcgtcatcagctcttattttgacgagaagggtctggtc
cggcagcagctggactcatttgatgagttcatccagatgtctgtccagaggatcgtggag
gacgccccacccatagacctgcaggctgaagctcagcacacgtctggagaggtggaggat
ccgcctcgttacctcctcaagtttgagcagatctacctgtccaagcccacgcactgggaa
cgggatggagcaccgtcccccatgatgcccaatgaggcccgactacgaaacctcacgtac
tcagcaccgttgtatgtcgacatcacaaagacgatcacaaaggagggcgaggaccagctc
cagacccagcatcagaagactttcatcgggaaaattcccatcatgcttcgctccacctac
tgtctgctgagcgggctgacagacagagacctgtgtgagctgaacgagtgtccgctggac
cctggagggtacttcattatcaatggctcagagaaggtcctcattgctcaggaaaaaatg
gccactaacacagtctatgtgttcgccaagaaggactccaagtacgcctacacgggagag
tgccgctcctgtttggagaactcttctcgtcccaccagcaccatctgggtcagcatgatg
gcccgtggaggacagggcgtgaagaagagtgccattggtcagaggatcgtctcaacgctg
ccatacatcagacaggaagttcccattattatcgtgttcagagcgctgggcttcgtgtct
gacagagacatcctggaacacatcatctacgactttgacgaccctgagatgatggagatg
aaatacgccaaagaagttttacagaaagaaatgctgcctcacgttggagtgagcgacttc
tgtgagaccaagaaggcatacttctcagggtacatggtgcacaggttgctgcttgccgcc
ctcggcagacgggagctcgacgacagagatcactacggcaacaagagacttgacctggca
gggccactgttggccttcctgtttagggggatgttcaagaaccttctgaaggagatcagg
atttacgctcagaagttcattgaccgggggaaggacttcaacctggagcttgccatcaaa
acacgaatcatctccgatggactcaaatactcactcgccacggggaactggggcgacgtc
aaaaaggcccaccaggcccgagcaggcgtgtcccaggtgttgaaccgtctcacctttgcc
tccacgctgtctcaccttcgtcgagtcaactctcctatcggcagagatggaaaactggcc
aagcctcggcagctacataacacgctgtgggggatggtgtgcccagccgagacgcctgag
ggtcacgctgtgggtctggtgaagaacctggccctcatggcctacatctctgtaggctct
cagccgtcccccatcctggagtttttggaagagtggagcatggagaacctggaggagatc
tcaccggccgccatcgcagatgccactaagattttcgtgaatggctgctgggtgggaatc
cacaaagatcctgagcagctcatgaacactctgaggaaactccgcagacagatggacatc
atcgtgtccgaggtgtcaatgatccgagacatcagagagcgagagattagaatctacacg
gacgctggccgaatctgtagaccgctgctgattgtggagaaacaaaaactactgctgaag
aggaggcacatcgaccagctgaaggagcgcgagtacaacaactacagctggcaggacctg
gtggcgagtggtgtggtcgagtacattgacactctggaggaggaaacagtgatgctcgcc
atgactcctgatgacctgcaggagaagggcgtcgcctactgctctacctacacccattgt
gagatccacccatcaatgatcctcggagtgtgtgcgtcaatcatccccttccctgaccac
aaccagtctcccaggaacacgtaccagtctgccatgggcaaacaggccatgggggtctac
atcacaaacttccacgttcggatggacaccctggcccacgtgttgtactaccctcagaaa
ccgctcgtcaccacccgatcaatggagtacctgcgctttagagagctgccagcaggtatc
aactccattgtcgccatcgcctcgtacaccggctacaaccaggaggactctgtgattatg
aaccgctcagcggtggatcgaggattcttcaggtccgtgttttatcggtcatacaaagag
caagaatccaagaaaggattcgatcaggaggaaatctttgagaagccaactcgggaaacc
tgttcaggtatgagacatgcgatctatgacaagctggatgatgacgggctaatcgcacct
ggcgtaagagtctcaggtgaggacgtgatcatcgggaagacggtgacactgcccgagaac
gacgatgagcttgacagcaccaaccgccgttacaccaagagagactgcagcacctttctt
agaaccagcgagactggaatcgtggaccaggtgatggtgactctgaaccaggagggctac
aagttctgcaagatccgggtacgttctgtccggatccctcagattggagataaatttgcc
agccgacacggacagaaaggaacctgtggaatacagtatagacaggaggatatgccgttt
acctgtgagggaatcacacctgacattatcatcaaccctcacgccatcccatcaagaatg
acggttggccatcttatcgagtgcctgcagggcaaggtttcggctaacaaaggtgagatc
ggtgacgccacaccgtttaacgacgccgtcaatgtgcagaaagtgtcgaacctgctgtcc
gagtacggataccacctgagaggaaatgaggtgttgtataacggcttcacggggaggaaa
ctgacgtctcagatcttcatcggaccaacatattatcagcgcctgaagcacatggtggat
gacaagatccactccagggcccggggccccgtccagatcctcaacagacagcctatggag
ggccgatcccgtgatggcgggctgcgttttggggagatggagcgtgattgtcagattgct
cacggagccgctcagttcctcagagagcgtctgtttgaggcgtctgacccctaccaggtt
cacgtgtgcaacctgtgcggcctcatggccatcgccaacacacggacccacacctacgag
tgtcgaggctgccgcaacaaaacccagatctcgctcgtcaggatgccgtacgcctgtaag
cttcttttccaggagttgatgtcaatgagcattgcccctcgaatgatgacatcatag
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integrated database retrieval system
