Cheilinus undulatus (humphead wrasse): 121516223
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Entry
121516223 CDS
T07473
Symbol
abca1b
Name
(RefSeq) phospholipid-transporting ATPase ABCA1b
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
cud
Cheilinus undulatus (humphead wrasse)
Pathway
cud02010
ABC transporters
cud04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
cud00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
121516223 (abca1b)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
121516223 (abca1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cud02000
]
121516223 (abca1b)
Transporters [BR:
cud02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
121516223 (abca1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
Motif
Other DBs
NCBI-GeneID:
121516223
NCBI-ProteinID:
XP_041653310
LinkDB
All DBs
Position
10:47618959..47672286
Genome browser
AA seq
2295 aa
AA seq
DB search
MSVRTQLGLLLWKNLTYRRRQTLQLLVEIVWPLFIFFILIAVRLNYPPYEQHECHFPNKA
MPSAGTLPWIQGILCNANNPCFRNPTPGESPGVVGNFNDSIISRLFSDAKKILLYSQNDK
NLEGFKELSQALQVMQKSQSGFKLKHFLRDDETLSTFLRRNASLSEQDVKQITNADVNLE
KVLLKGFGIHLRNMCPRRGSGRSLQDFVNISDPHVSTLVQEILCQAPPTWLNQAEELFMS
NLDFLKPIQRDVTSDPEAVQQVAKATNNLLDSLGSLAVELAGMKSWIDLRNEIVFLTRNA
TSSPSTMYQAVSRIVCGHPEGGGLQIKSLNWYEDSNYKALFGNHNSSEDEPAALYDNSTT
PFCNSLVRSMDSNPMSRMIWTAVKPLLLGKILYTPHTPATAKVIHEVNRTFQELGVFRDL
GGMWEEMRPKVWDFMENSEQMDLIRTLLKNNVTAGFFHAQLSGTDYTVADISNFLTKKAE
DRRPEGGAVTWREVFNETDQAIMSISRFMECVNLDKLEPVSTEERLINQSMLLLDDRKFW
AGIVFPDVDPNATELPAKLNYKIRMDIDNVERTNKIKDAYWDPGPRADPFEDMRYIWGGF
TYLQDVIEQGIIRAVTGTKEKTGVYIQQMPYPCYVDDIFLRVMSRSMPLFMTLAWMYSVA
IILKSVVYEKEARLKETMRIMGLNNGILWFSWFISSLIPLLISAGLLVLLLKQGNLLPYS
DPGVVFLFLGSFAVVTIMQCFLLSTAFARANLAAACGGIIYFTLYLPYVLCVAWQDYIGF
GAKVFASFLSPVAFGFGCEYFALFEEQGVGIQWKNLVSSPLEEDDFSLRSAIIMMYVDSF
LYGVLTWYLEAVFPGQYGIPRPWFFPFTMSYWFGEKDGKSTKVPLSRRGNVGAVCMEEEP
AHLEPGVYIENLVKVYRHGKKLAVDGLTLGFYEGQITSFLGHNGAGKTTTMSILTGLFPP
TSGTAYILGRDIRSELSAIRQSLGVCPQHNVLFSMLTVEEHIWFYGRLKGLSEEQVKGEI
EQILQDTGLPHKRRSRTSALSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYARRGIWD
LLLQYRQGRTIILSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKNQLGTGYYLTLVKK
EPEPSVSSCRNSSSTVSINKEEECGSVSSSDAGLGSEHESEAATIENGPAASVCDVPLVP
PDVSLVSNVILSHVPAARLVEDLGHELTYVLPYSAAKDGAFVELFKDLDLKLPDLGISSY
GVSDTTLEEIFLKVAEDNGVDTDVPSDGTLPVRRRRRTHAFGGGDHQSCLRPLTEDDNNE
CNESDGDPDCRETDWLKVTEGKGSYQVKGWSLRRQQFVALMWKRFLYARRSRKGFFAQIV
LPAVFVCIALVFSLIVPPFGKYPSLELQPWMYEDQVTFISDDAPTDANMQRLLSALLDPP
GFGTRCMEGHPIPEAPCTMGDEDWIFPEVPESVQQLFSSTNWTMDNPSPACFCSCEGKKK
MLPECPAGAGGLPPPEMKMSASDTLQNLTGRNISDYLVKTYAQIIGKSLKNKVWVNEFRY
GGLSLGARSTQVLPPAKEIDDAIARVRKIFELKKGAAADRFLDNLSGFINGLDTKNNVKI
WFNNKGWHSIGAFVNVMNNAILRANLPPGKDPSSYGISAFNHPLNLTKEQLSQVALVTTS
VDVLVSICVIFAMSFVPASFVVFLIQERVSKTKHMHFISGVQPLLYWTASFIWDMCNYIV
PATLVILIFICFQQKAYVSSTNLPALALLLLLYGWSITPLMYPASFFFTIPSTAYVVLTS
VNILIGINGSISTFVMELFGNNEIGGINDILKNVLLIFPHFCLGRGLIDMVKNQAMADAL
ERFGENRLRSPLEWDMVGKNLFAMAVEGVVFFIITLLIQYRFCIKPRPVSKLTKLPPLGE
EDEDVARERQRIVHGLGHGDILELRQLTKVFKRKQKPAVDRLCVGIPPGECFGLLGVNGA
GKTTTFKMLTGDTLVTSGEAFLSGKSILREIDEVHQNMGYCPQFDSINDLLTGREHLELY
AILRGVPEKEVCDVAEWGIRKLGLVKYADKKAGSYSGGNLRKLSTAMALIGAPPVVFLDE
PTTGMDPKARRALWNCIHSVIKEGRSVVLTSHSMEECEALCTRMAIMVNGRFRCLGSVQH
LKNRFGDGYTIILRVAGPDPDLLPVMKFIESELSGSTLKEKHRNMLQYQLPSSLTSLTHI
FSILAKNKEMLRIEDYSVTQTTLDQVFVNFAKDQSDDYHSKDASVRRKDISINIPTLSSS
PGAAEGRSSLRESVM
NT seq
6888 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtgaggactcagctgggcctgctgctgtggaagaacctgacctacagacgccgg
cagaccctccagctgctggtggagatcgtctggccgctcttcatcttcttcatcctcatc
gctgtcagactgaactatcctccatatgagcagcatgaatgtcacttccctaacaaagcc
atgccatcagcaggcacgttaccatggatacaggggatcctctgtaacgccaacaacccg
tgtttcaggaacccaacaccaggagagtcgccgggtgtcgtcggcaacttcaacgactcc
ataatttcccgcctgttttcagatgctaagaagattcttctgtacagtcagaatgataaa
aacctggaggggttcaaggagctttctcaggccctacaggtgatgcagaaaagccaatca
gggtttaagctgaagcacttcctgcgtgatgatgagactctgtcaacgttcctacgcagg
aacgcctcactctctgagcaagatgtgaagcagatcacaaacgccgacgtcaacctggag
aaggtgctcctcaaaggttttggcattcatctgaggaacatgtgtcccaggagagggagt
gggcggagcttacaggactttgttaatatctcagaccctcacgtgtccacgctggtacag
gaaatcctctgtcaggccccgcccacctggttaaaccaggccgaggagctgttcatgagc
aacctggacttcctgaaacccatccagagggacgtgacgtctgaccctgaggccgtgcaa
caggtcgccaaggcaacaaacaacctcctggacagtctgggttcactggctgtggagttg
gcgggaatgaagagctggattgacctgaggaacgagatcgtgttcctgacccggaatgcc
acgtcatcccccagcaccatgtaccaggctgtgtctaggatcgtgtgcggtcacccggag
gggggcggtctgcagatcaagtctctaaactggtacgaggacagcaactacaaggctctg
tttggaaaccacaacagcagcgaggacgagccagcggcgctctacgacaactctaccact
ccgttctgtaacagcctggtcaggagcatggactctaaccccatgtctcggatgatctgg
actgctgtcaagcctctgctgctggggaagatcctgtacacgccgcacacacccgccacc
gccaaggttatacacgaggtgaatcggacattccaggagcttggtgtgttcagggacctt
ggtgggatgtgggaggagatgagaccaaaagtctgggacttcatggagaacagcgagcag
atggatctgatccggactctcctcaagaacaacgtcaccgcagggttctttcacgctcag
ctgtccggcactgactacaccgtcgctgacatttccaacttcctgactaagaaggcagag
gatcgccggccagagggcggtgccgtcacctggagggaagtgttcaacgagacagaccag
gccatcatgagcatctcccgcttcatggagtgtgtaaacctggacaaacttgagcctgtc
tccactgaggagcgtctcatcaatcagtccatgctgctgctggatgacaggaagttctgg
gcggggatcgtcttccccgacgtcgatccgaatgccaccgagctccccgccaaactcaac
tacaagatccgcatggacatcgacaacgtggagcggaccaacaaaatcaaagacgcgtac
tgggaccccggtcctcgggccgacccctttgaggacatgcggtacatctggggcgggttc
acgtacctgcaggacgtcattgagcagggcatcatccgggcagtgacgggcaccaaggag
aagacaggggtgtacatccagcagatgccgtacccgtgctacgtggacgacatattcctg
cgagttatgagccgctccatgccgctcttcatgactctggcgtggatgtactcggtggcg
attatcctgaagagcgtggtgtacgagaaggaggctcgtctgaaggagacgatgaggatc
atgggtttgaataacggcatcctgtggttcagttggttcatcagcagcctcatccctctg
ctgatcagcgccgggctgctggtgctgctgctcaagcaagggaaccttctgccctacagt
gaccctggcgtggtcttcctcttcctcggttccttcgctgtggtcaccatcatgcagtgt
ttcctgctcagtacagcgtttgctcgtgctaacctagcagcggcatgcggcggtatcatc
tacttcacgctgtatctaccctacgttctgtgtgtggcgtggcaggactacatcggcttt
ggtgccaaagttttcgctagcttcctgtctcccgtggcgttcgggttcggctgtgagtac
tttgctctgtttgaggaacagggtgtgggtatccagtggaagaacctggtgtccagtcct
ctggaggaggatgacttcagccttcgcagtgccattatcatgatgtacgtcgactccttc
ctctacggcgtgctcacctggtacctggaggccgtgtttccaggtcagtacggtatcccc
cggccctggtttttccccttcactatgtcgtactggttcggagagaaggatgggaagtcc
actaaagtccctctgagccgcagaggaaatgttggagcggtgtgtatggaggaggaaccg
gctcacctggagcccggcgtttacatcgagaacctggtaaaggtttaccgacacgggaag
aagctggcggtggacggactgacgcttggattctatgagggacagatcacgtcttttctg
ggacacaacggcgccgggaagaccacaaccatgtcgatcctcaccggtctgttcccgccc
acctcaggtaccgcctacatcctgggcagagacatccggtcagagctgagcgccatcaga
cagagtctgggagtttgtcctcaacacaacgtcctcttcagcatgctgacagtggaggag
catatctggttctacggccgtctcaaaggtctatcagaggagcaggtcaaaggtgagatc
gagcagatccttcaggacaccgggctgccgcacaaacgccggtccaggacgagcgctctg
tcaggggggatgcagaggaagctgtcagtggctctagccttcgttggagggtctaaggtc
gtcattctggatgagccaacggccggcgtggacccgtacgcccgcagggggatctgggat
cttctactccaatacagacaaggccgcaccatcatcctgtccacacaccacatggacgag
gccgacatcttaggagaccgcattgccatcatctctcatgggaaactgtgctgcgtaggc
tcctccctcttcctgaagaaccagctggggacagggtactacctgaccctcgttaagaaa
gaaccggaaccctctgttagctcctgcaggaactcatccagcacagtgtccatcaacaag
gaagaagagtgtgggtctgttagcagcagcgacgccggccttggtagtgaacacgagagt
gaggcagcgaccatcgagaacggccctgcagcttccgtctgtgacgtccctcttgtaccc
cctgatgtgtccctggtctctaatgtgatcctgagtcacgtccccgccgcccgcttggtt
gaggacctgggacatgagctgacctatgtgctgccatacagcgctgccaaagatggtgcc
ttcgttgaactgtttaaagacctggacctgaagctgcctgacctcggcatctccagctac
ggcgtttccgacaccacacttgaggagattttcctgaaagttgccgaggataacggcgtg
gacactgacgttccctcagatggtacacttcctgtgcggaggcggaggaggactcacgcc
ttcgggggcggagaccatcagagctgcctgagaccgttaacggaggacgacaacaacgag
tgcaacgagtctgacggagaccccgactgcagggagacggactggctgaaggtgactgaa
ggcaaaggctcgtaccaggtgaaggggtggagcctgaggaggcagcagtttgtggctctg
atgtggaaacgcttcctgtacgcccgccgctccaggaagggcttcttcgcccagatcgtt
ctgcctgccgtgtttgtgtgcatcgctcttgtcttcagtctcatcgtccccccatttgga
aaatacccgagtctggagctgcagccctggatgtatgaggaccaggtcaccttcatcagt
gacgacgcccccacagatgctaacatgcagagactgttgagcgctctcctcgaccctcca
ggctttggcactcgctgcatggaaggacaccctatcccagaggccccctgtaccatgggt
gatgaggactggatctttccggaggttcctgaaagtgtccagcagctgttcagctccaca
aactggaccatggacaacccgtctccggcgtgtttctgcagttgtgagggaaaaaagaag
atgctgccagagtgccccgccggcgccggaggactgccgccaccggagatgaagatgagc
gcctcagacacgctacagaacctgacaggtagaaacatttcagactacctggtgaaaacg
tacgctcagatcatcggcaagagtctgaagaataaagtctgggtgaacgagttcaggtat
ggaggcttgtcattgggtgcccgtagcactcaggtcctcccaccggccaaagagattgac
gacgccatcgcaagagtgaggaagatcttcgagctcaaaaagggagcagctgctgatcgg
ttccttgataatctctcaggttttatcaacggtttggacacgaagaacaacgtgaagatc
tggttcaataacaaaggctggcacagcatcggcgcgttcgtcaatgtcatgaacaacgcc
atcctcagagctaacctgcctccaggtaaagacccgagcagctacgggatctcggccttc
aaccacccgctgaacttgaccaaggagcagctgtcgcaggtcgccctggtaactacctcc
gtggacgtcctggtgtcaatctgtgtgatcttcgccatgtcattcgtccccgccagcttc
gtggtcttcctgatccaggagcgtgtcagtaagaccaaacacatgcacttcatcagcggg
gtacaaccactgctctactggactgctagcttcatctgggacatgtgtaactacatcgtc
ccggcaacactggttatcctcatcttcatctgtttccaacaaaaagcctatgtgtcctcc
accaacctgccagcgctcgccctgctgctgctgctctatggctggtcgatcacccctctg
atgtaccccgcctcctttttcttcaccatcccgagcacggcatacgtggtcctcaccagc
gtcaacattctcatcggcatcaacggcagcatctctaccttcgtcatggagctgtttggg
aacaacgagatcggcgggatcaatgacatcctgaagaatgtcctgctcatcttccctcac
ttctgtctgggccgaggtctcatcgacatggtgaagaaccaggcaatggcagatgccctt
gagagattcggtgagaacaggttacgctcaccgctggagtgggacatggtgggaaagaac
ctgtttgccatggcggtggagggcgtggtcttcttcatcatcacactcctcatccagtac
cgcttctgcatcaaacccaggccggtcagcaaactcaccaaacttcctcctctgggagaa
gaagacgaggacgtcgccagagagaggcagaggattgtccacgggctcggacatggagac
atcctggagctccgacagctcaccaaggtgtttaagaggaagcagaaacctgccgtggat
cgactgtgtgtggggatcccacctggagagtgtttcgggctgctcggtgtgaacggggca
gggaagacaaccacctttaagatgctgacgggtgacacgctggtgacgagcggcgaggca
ttcctgtcggggaaaagcatcctgagagagatcgacgaggttcaccagaacatgggctac
tgtcctcagtttgactccatcaatgacctgctgaccggtagagaacacctggagctgtac
gccatactgagaggagtccctgagaaggaagtgtgtgacgtggctgagtgggggatcagg
aagttgggtctggtgaagtacgccgataagaaagcaggaagttacagtggcggaaacctc
aggaagctttctacagccatggctctgattggagcgcccccggtcgtcttcctggacgag
cccactacaggaatggaccccaaagctcgccgcgccctctggaactgcatccacagcgtc
atcaaggagggacgctccgtcgtgctcacctcacacagcatggaggaatgtgaggctctg
tgcaccaggatggccatcatggtgaacggcaggttcaggtgtctgggcagcgtccaacac
ctgaagaacaggtttggtgatgggtacaccatcatcctgagggtagcagggcctgaccct
gacctgctccccgtcatgaagttcattgagagcgagctgagcggcagcactctgaaggag
aaacaccgtaacatgctacagtaccagctgccgtcctccctcacctcgctcacccacatc
ttctccatcctcgccaagaacaaggagatgctccgcatcgaggactactcggtcactcag
accacactggaccaggtgtttgtaaactttgccaaggaccagagcgatgactaccactcc
aaagatgcctcggtcagaaggaaggacatctcaatcaatatccccacgctgagctcctct
cctggagcggcagaggggcggagctctctgagggaaagcgtcatgtga
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integrated database retrieval system
