Cheilinus undulatus (humphead wrasse): 121517160
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Entry
121517160 CDS
T07473
Name
(RefSeq) collagen alpha-5(IV) chain-like
KO
K06237
collagen type IV alpha
Organism
cud
Cheilinus undulatus (humphead wrasse)
Pathway
cud04382
Cornified envelope formation
cud04510
Focal adhesion
cud04512
ECM-receptor interaction
cud04518
Integrin signaling
cud04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cud00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
121517160
04518 Integrin signaling
121517160
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
121517160
09142 Cell motility
04820 Cytoskeleton in muscle cells
121517160
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
121517160
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cud04147
]
121517160
00536 Glycosaminoglycan binding proteins [BR:
cud00536
]
121517160
Exosome [BR:
cud04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
121517160
Glycosaminoglycan binding proteins [BR:
cud00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
121517160
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
121517160
NCBI-ProteinID:
XP_041654659
LinkDB
All DBs
AA seq
1334 aa
AA seq
DB search
MIAGVPGKLGFKGVKGERGDPGTLGKPGKDGLYGELGLPGDPGDRGYLGLPGIDGVRGEK
GEPGIPGLPGEVVFVDSFLKGQSGTPGPQGPPGFPGPQGIIGFPGMQGDQGVAIPGPPGP
QGPPGFSGPKGDKGEPGPVYVGPTGDDGIPGSPGIDGEPGEPGIPGDSLPPAYFLSGPVG
PPGAKGQKGLRGFPGLRGKGGEPGEKGEPCFSCPFPLSIPAQPGLPGEPGEDGQPGLAGF
PGLKGDSGVKGIRGPPGSEGPFGFPGTPGVPGPPGDPGIMRRMGLKGEVGDPGEPGAPGL
VGFDGTPGATGPKGVLGPKGNPGPPGVKGERGLYGETGPRGPIGQVGPPGPPGIGAPGPP
GPKGNIGVQGPRGDPGGPGEKGSQGEVRTYPGDLGLKGEKGLPGNPGPEGPPGRPGSVGP
NGEKGDGGFSLQGPPGFPGVKGQETRVFQELQVYQDLVLRAGPGHQALQGCQARRGTGDL
AFQVSRVPQAPREKMALQAHKETLDSKGQLELQELQDKMDFQDLKVIEVQMVLLVLLVLL
EYVSLENLVLMESLDRGESLDSQATEETQDPQESPVNQERMGNQEMMALKDRKVSSNNCE
LGVDGTKGPQGPAGLQGDRGATGPKGIPTSVPVYGEPGDPGNPGVIGLTGLKGERATIGP
QGSDGSNGRSGNPGPPGPRGDSGSTGLTGTPGPCGVIGDRGLMGKPGCRGEKGIPGPCGA
PGFNGKPGPGGPKGPKGEPSLPGPGAKGFPGEKGDAGYPGLQGLKGTPGNFGNPGPPGEC
GPCGPKGEGGPSGCRGPPGTSGEKGCDGPPGTNGLPGPTGLTGNKGPPGDPGQAGLRGNQ
GQDGIPGPPGEKGAMGAPGIGPRGPDGKKGPSGCAGEPGPLGPCGPPGPRGLEGDSGCAG
PPGPPGPPGCPGKDGVCIDGVKGEKGFPGLRGLKGAKGCQGPPGPPGPGFKGEKGNKGPP
GNTGPLGFRGEPGQEGKPGEDGPPGPPGPKGLMGYIGVPGPMGPKGVDGLPGNFGSRGPP
GPPGRRGQRGEDATVDVELVPGDPGLPGLPGLPGQRGPPGPRGRSGGPGFKGIKGRAGRR
GFAGRPGLKGEQGEPGFPGLKGIPGLRGPVGAKGSRGWPGPMGDVPEHDGFLFTRHSQEL
FIPECPAGSNQVYNGYSLLFINGNNRAHGQDLGTLGSCLPRFTTMPFLFCSTDSTCRYAS
RNDYSYWLSTDKELPGSMPFISGDPLKNYISRCTVCEARANVIAIHSQTRETGVGAEGSG
QPLASPGSCLENFRKIPFIECHGRGTCNYYTDSYSYWLAALNPNDMFSKPKPQTDTGAFP
GSLISRCRVCMKQL
NT seq
4005 nt
NT seq
+upstream
nt +downstream
nt
atgattgctggtgtgccaggaaaactggggtttaaaggagtgaagggcgagcgaggagat
ccagggacacttggtaaaccggggaaggacggactctatggagagctgggattgccggga
gaccctggggatcgtgggtatctgggtcttccaggtatcgatggagtcaggggggagaag
ggcgagcctggcatccccggtcttccaggagaggtagtcttcgttgatagcttcctgaag
ggccagagtgggactccagggcctcagggacccccaggattcccaggacctcaaggaatc
attgggtttcctggaatgcagggcgatcaaggtgtggctatccctggtcccccaggccca
caggggccccctggcttctctggacctaaaggagataaaggagagccagggccggtctac
gttggtccaacaggagatgatggaattccgggaagtcctggcattgatggtgaaccagga
gaacctggaataccaggtgatagtctgcctcctgcatatttcctatcaggacctgttggt
cctccaggagcgaaaggtcaaaaggggctgaggggatttcctggactcagagggaaggga
ggggagccaggtgagaagggggagccgtgctttagctgcccttttcctctcagcattcca
gcacaaccaggtttacctggagagccaggtgaagacgggcagccaggtttggctgggttt
cctggactcaaaggtgacagtggtgtcaaaggtatcagaggaccgccggggtcagagggt
ccattcggtttccccggcaccccaggggttccaggacctcctggtgaccctggcatcatg
cggagaatggggctgaagggagaggttggggaccccggggagccaggagcaccaggtttg
gtggggtttgatggaactccaggtgcaacgggaccaaaaggcgtcctgggaccaaaggga
aaccctgggcctccaggggtaaaaggtgaacggggcctttatggtgaaactggtcctaga
ggaccaataggacaggtggggcctccaggaccacctggaatcggggctccaggacctcct
ggacctaaaggcaatattggagtccagggaccacgaggagatcctggagggccaggagaa
aaaggttctcaaggggaagttagaacttatccaggagacctgggactgaaaggagagaaa
ggtctaccaggaaaccccggccctgagggacctccaggtcgtccaggatctgtcggtcca
aatggagaaaaaggggatggaggattttcactccagggtcctccaggcttcccaggggtc
aaaggtcaggaaacaagggtgttccaggagctccaggtttaccaggatttggtattaagg
gccgggccgggccatcaggccctccagggatgccaggctcgaagggggacaggggatttg
gctttccaggtcagcagggtccctcaggcccccagggagaagatggctttgcaggcccac
aaggagaccctggattccaagggtcaactggagctccaggagctccaggacaagatggac
ttccaggacctaaaggtaatagaggtccagatggtcctcctggtcctcctggtccttttg
gaatatgtatccctggaaaacctggtcctgatggagagcctggaccgaggggagtcattg
gattcacaggcaacagaggaaacgcaggacccccaggagtccccggtaaaccaggagagg
atgggaaatcaggagatgatggccttaaaggacagaaaggtttcatccaacaactgtgag
ctgggcgtggatggaacaaagggtcctcaggggcctgcaggacttcaaggagaccgtgga
gcaacaggacccaaaggaatcccaacgtctgtgccggtgtacggagaacccggggacccg
gggaaccctggggtcataggtctgactggtttaaaaggagagagggccaccataggcccc
cagggctcagatggaagcaatggtcgatctggaaatcctggaccaccaggcccccgtgga
gactctggcagtactggactgactggcactcctggtccctgtggagtcatcggtgaccgt
ggattgatggggaagccaggctgtagaggtgagaaaggaattccagggccttgtggagca
cctggttttaatggaaaaccaggaccaggaggaccaaaaggccctaaaggagaaccaagc
ctacctggaccaggagccaagggatttccaggagagaagggggatgcagggtatccagga
cttcagggcttaaaggggacaccagggaactttggaaaccctggtcctccaggagaatgt
ggcccctgtggtcctaaaggagaaggtggaccctcaggatgcagaggacctccagggact
tcaggtgaaaagggatgtgatggtcctcctggtacaaatggcctcccggggcccacgggc
ctcacaggaaacaagggccctcctggagatcctggtcaagctggactgagagggaaccag
ggccaggatgggatacccggccctccaggagagaaaggagccatgggagcccctgggatt
ggcccccgaggcccagatgggaagaaaggtccatctgggtgtgctggagagcctggtcca
cttggtccctgtgggcctcctggtccccggggtcttgaaggagactctggttgtgctggt
cctcctggaccccctggtcctcctggttgtcctggcaaggatggagtttgcattgatgga
gttaaaggggagaagggattcccaggactacgaggactcaaaggtgcaaagggttgccag
ggtcctccgggtcctccaggtcctggttttaaaggagagaagggaaataaaggaccacca
ggtaacacaggaccacttggtttccgtggtgaaccaggacaagaaggcaagccgggtgaa
gatggaccaccaggcccacctggaccaaaaggcctgatgggatacatcggtgtaccagga
cccatgggtccaaagggcgtggatggactgccagggaactttggctcacgaggacctcca
ggaccacctgggagaagaggtcagagaggggaggacgcaactgtggacgtggagcttgtg
ccaggagacccaggcttacctggattaccaggactgccaggacaaagaggaccaccaggg
cccagagggaggtctggaggtccagggtttaagggaatcaaagggagggcggggagacga
ggatttgctggtcgacctggactgaaaggggagcaaggagaaccagggtttcccggactg
aaaggtattcctggtcttcgtggtccggttggtgctaaaggttctcgagggtggcctgga
cccatgggagatgtcccagagcatgacggcttcttgttcaccagacacagccaggagctc
tttatcccagaatgccctgcaggatcaaatcaagtttacaatggatactcgctgctgttt
atcaacgggaacaaccgagcgcacgggcaagacctgggtacactaggaagctgtctgcct
cgttttaccaccatgcctttcctgttctgtagcactgacagcacctgccgctacgcctca
cgcaacgactactcctattggctgtccacggacaaagaactgcccggcagcatgccgttc
atatctggagacccactgaagaattacatcagccggtgtactgtttgcgaggccagagcc
aatgtgatcgccatccacagtcagaccagagaaactggggtcggggcggagggatctggt
cagcctcttgcttctcctggatcatgcctggaaaactttcggaagattcccttcattgag
tgtcatggcagaggaacttgcaactactacactgactcatacagctactggctggctgct
ctcaaccccaacgacatgttcagtaaaccgaagcctcagacggacacgggagcgtttcca
ggcagtctgatcagccgctgtcgagtgtgtatgaagcagctgtga
DBGET
integrated database retrieval system