KEGG   Cheilinus undulatus (humphead wrasse): 121517651
Entry
121517651         CDS       T07473                                 
Symbol
polr2d
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB4
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
cud  Cheilinus undulatus (humphead wrasse)
Pathway
cud03020  RNA polymerase
cud03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cud00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    121517651 (polr2d)
  09124 Replication and repair
   03420 Nucleotide excision repair
    121517651 (polr2d)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cud03021]
    121517651 (polr2d)
   03400 DNA repair and recombination proteins [BR:cud03400]
    121517651 (polr2d)
Transcription machinery [BR:cud03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     121517651 (polr2d)
DNA repair and recombination proteins [BR:cud03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      121517651 (polr2d)
SSDB
Motif
Pfam: RNA_pol_Rpb4 Tfb4
Other DBs
NCBI-GeneID: 121517651
NCBI-ProteinID: XP_041655543
LinkDB
Position
2:54949254..54953133
AA seq 144 aa
MAAGSGAAPTHVGDVEEDASQLLFPKEFENAETLLNSEVHMLLEHRKQQNESAEDEQELS
EVFMKTLNYTARFSRFKNRETITAVRSLLLQKKLHKFELASLANLCPEAAEEAKALIPSL
EGRFEDEELQQILDDIQTKRSFQY
NT seq 435 nt   +upstreamnt  +downstreamnt
atggcggcaggaagcggcgcagctccaacacacgtcggtgatgttgaagaagatgcttca
cagttgctgtttcctaaagagtttgagaatgcagagactttgttgaactcggaggttcac
atgttgttggagcacaggaagcagcagaacgagagcgccgaggatgagcaggaactgtct
gaggtctttatgaagaccctgaactacacggctcgcttcagccggttcaagaaccgtgag
accatcacggccgtacgcagcctccttctgcagaagaagctccataagttcgagttagcc
agtttagctaacctgtgtcctgaagctgctgaggaggccaaagccctgatcccaagtctg
gagggtcggtttgaagacgaagagctgcagcagatcctcgacgacatccagaccaagagg
agcttccagtactga

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