Cheilinus undulatus (humphead wrasse): 121518210
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Entry
121518210 CDS
T07473
Symbol
ddx20
Name
(RefSeq) probable ATP-dependent RNA helicase DDX20
KO
K13131
ATP-dependent RNA helicase DDX20 [EC:
5.6.2.7
]
Organism
cud
Cheilinus undulatus (humphead wrasse)
Brite
KEGG Orthology (KO) [BR:
cud00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cud03041
]
121518210 (ddx20)
Enzymes [BR:
cud01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
121518210 (ddx20)
Spliceosome [BR:
cud03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
121518210 (ddx20)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
AAA_30
Motif
Other DBs
NCBI-GeneID:
121518210
NCBI-ProteinID:
XP_041656401
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Position
11:complement(28339202..28350234)
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AA seq
773 aa
AA seq
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MATSVRKAAHDIETRKRTDDVLLSEGINFSSLLLSQAVLDGLSAAGFQKPSPIQLKAIPL
GRCGLDLIVQAKSGTGKTCVFCTIALDSLVLENPATQVLVLAPTREIAVQIHSVVMAIGC
AMEGLECHVFIGGRPVSQDKLHLKKCHIAVGSPGRIKQLIELGMLSTASVRLFVLDEADK
LLEEGSFQEQINWIFSSLPANKQMLALSATYPESLAQHLTRYMSEPTFVRLNPSDMGLKG
LKQYYKLVQSHPLPHKVFEEKVQHLLELFSKIPFNQALVFSNLHTRAQHLADILSSKGLP
AVCISGGLSQDQRLEAMSKLKQYQCRVLISTDLTSRGIDADKVNLVINLDVPQDWETYMH
RIGRAGRFGTQGLAVTYCCHGEEENKMMAIAQKCSLSLSLLPSTLEPGLMDEPCDWDVCT
EASAPDTLSHFSSRTVKKKQRAKLVTNQEQEQSIQRKPEKCYPLPRSVAQREENPGKVST
APTRKELQDALPKIPPLSSFKTNRPRFMTFEKAKQDFESFMTTGLGRSVEVIREFRGRED
GGTDDLNRHRETVMLHADEAQGFKPNGTQRKSDFLHPRSASSSSSSESDDDDTRETTSNE
KKEPVIPWNNTKATPTTSEPQLETTQTDIFTPSPPEIYSQTSSASDCTAFSNSSETYKSA
SAVQSSRGSTQAALSHTNTNRSKKEKRGKNISEDKDRRRKKEREDKEHDDGEEEEEELSA
EDYWRSCYRAWNDYYSSMYPFQEQGYQNYYSVAHNWMAAYRMNSVYMEELQKY
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atggcgacctcggtgaggaaagcagcccacgacatcgaaacgcgcaaacgcaccgatgat
gtgcttctgtcagaggggatcaacttcagctccttgctgctctctcaggccgtgctggac
gggctgtccgccgcaggcttccagaaaccttccccgatccagctcaaagccatcccgcta
ggccgctgcggactcgatttgattgttcaggccaaatccggaacggggaagacatgtgtg
ttctgcaccatcgctctggactctctggtgctggagaatcctgcaactcaggttcttgtt
cttgctcccacacgtgagatagcggtgcagatccactccgtagtgatggccataggctgt
gccatggagggcctggagtgccatgttttcattggtgggcggcccgtgagtcaggacaaa
ctccacctgaagaagtgccacatagctgtaggctcacctgggcgtattaagcagcttatc
gagctgggcatgctgtccacggccagcgtccgcctgtttgttctggatgaggctgacaag
cttctggaggagggcagcttccaggaacagatcaactggatcttctcctctttgcctgca
aacaaacagatgcttgctctctctgccacctacccagaatcccttgctcaacatcttacc
cgctacatgagcgaacccacatttgtccgactaaaccccagtgacatgggccttaaaggt
ctgaaacagtattacaagctggtgcagtcccatcctctacctcacaaggtgtttgaggag
aaggtgcagcacctgctggagcttttcagcaaaatcccattcaaccaggcactggtgttc
tccaacctccatacaagggctcagcatctggcagacatcctgtcctccaaaggcctacct
gctgtttgtatctcagggggtctgagccaggaccagagactggaggcaatgtccaaactg
aagcagtaccagtgcagagtgctcatctctactgatctgacgtccagaggcatagatgca
gacaaagtgaacttggtgataaacctggatgtgcctcaggactgggagacctacatgcac
cgaattggaagagctggccgcttcggcactcaggggcttgctgtgacctattgttgccat
ggcgaggaggaaaacaagatgatggccatcgctcagaagtgcagcctgagtctgtctctg
ttaccatccaccctagagcctgggttgatggatgagccatgtgactgggatgtctgcacc
gaggcctccgctccagacactttatcacacttctcatccaggacagtgaagaagaagcag
cgggccaagttggtcacaaatcaagaacaagagcagagtattcaaagaaagccagagaag
tgctatcctctaccccgatcagtagcacaacgtgaagaaaatcctggaaaagtatctaca
gccccgactcgaaaagagctgcaagacgctctgccaaagatcccccctctcagctcgttc
aagacaaacaggccgaggtttatgacctttgagaaggctaagcaggactttgagagcttc
atgaccacagggttggggagatcagtggaggtcatcagggagtttagaggtcgagaggac
ggtggcactgatgatctaaacaggcacagagagactgtcatgctgcatgctgacgaagct
caaggctttaagccaaatggaacccaaagaaaatctgactttttacatccgagatcagcc
tcttcttcctcaagctcagaatcagacgatgatgacacaagggaaaccacaagtaatgaa
aagaaggagcctgttatcccttggaataacactaaagcaactcccactacatccgaacca
cagcttgagacaacacaaactgacatttttacaccatctccaccagaaatctacagccag
acaagctctgcatcagactgcacagctttttctaactcctctgaaacctataaatctgca
tcagctgttcaatctagcaggggatctactcaggcggctctatcacacaccaacacaaac
agatcaaaaaaggaaaaaagaggcaaaaacatttcagaggataaagacagacggcgaaag
aaagaaagggaggataaagagcatgatgatggagaggaggaagaggaggagttgagtgca
gaagattactggagatcatgctacagagcctggaatgactactactcctctatgtatcct
tttcaggagcaagggtaccaaaactactacagcgtggcccacaactggatggcagcttat
cgtatgaactcagtttacatggaagaactccaaaaatactaa
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