KEGG   Cheilinus undulatus (humphead wrasse): 121518210
Entry
121518210         CDS       T07473                                 
Symbol
ddx20
Name
(RefSeq) probable ATP-dependent RNA helicase DDX20
  KO
K13131  ATP-dependent RNA helicase DDX20 [EC:5.6.2.7]
Organism
cud  Cheilinus undulatus (humphead wrasse)
Brite
KEGG Orthology (KO) [BR:cud00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cud03041]
    121518210 (ddx20)
Enzymes [BR:cud01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     121518210 (ddx20)
Spliceosome [BR:cud03041]
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   SMN complex factors
    121518210 (ddx20)
SSDB
Motif
Pfam: DEAD Helicase_C ResIII CMS1 AAA_30
Other DBs
NCBI-GeneID: 121518210
NCBI-ProteinID: XP_041656401
LinkDB
Position
11:complement(28339202..28350234)
AA seq 773 aa
MATSVRKAAHDIETRKRTDDVLLSEGINFSSLLLSQAVLDGLSAAGFQKPSPIQLKAIPL
GRCGLDLIVQAKSGTGKTCVFCTIALDSLVLENPATQVLVLAPTREIAVQIHSVVMAIGC
AMEGLECHVFIGGRPVSQDKLHLKKCHIAVGSPGRIKQLIELGMLSTASVRLFVLDEADK
LLEEGSFQEQINWIFSSLPANKQMLALSATYPESLAQHLTRYMSEPTFVRLNPSDMGLKG
LKQYYKLVQSHPLPHKVFEEKVQHLLELFSKIPFNQALVFSNLHTRAQHLADILSSKGLP
AVCISGGLSQDQRLEAMSKLKQYQCRVLISTDLTSRGIDADKVNLVINLDVPQDWETYMH
RIGRAGRFGTQGLAVTYCCHGEEENKMMAIAQKCSLSLSLLPSTLEPGLMDEPCDWDVCT
EASAPDTLSHFSSRTVKKKQRAKLVTNQEQEQSIQRKPEKCYPLPRSVAQREENPGKVST
APTRKELQDALPKIPPLSSFKTNRPRFMTFEKAKQDFESFMTTGLGRSVEVIREFRGRED
GGTDDLNRHRETVMLHADEAQGFKPNGTQRKSDFLHPRSASSSSSSESDDDDTRETTSNE
KKEPVIPWNNTKATPTTSEPQLETTQTDIFTPSPPEIYSQTSSASDCTAFSNSSETYKSA
SAVQSSRGSTQAALSHTNTNRSKKEKRGKNISEDKDRRRKKEREDKEHDDGEEEEEELSA
EDYWRSCYRAWNDYYSSMYPFQEQGYQNYYSVAHNWMAAYRMNSVYMEELQKY
NT seq 2322 nt   +upstreamnt  +downstreamnt
atggcgacctcggtgaggaaagcagcccacgacatcgaaacgcgcaaacgcaccgatgat
gtgcttctgtcagaggggatcaacttcagctccttgctgctctctcaggccgtgctggac
gggctgtccgccgcaggcttccagaaaccttccccgatccagctcaaagccatcccgcta
ggccgctgcggactcgatttgattgttcaggccaaatccggaacggggaagacatgtgtg
ttctgcaccatcgctctggactctctggtgctggagaatcctgcaactcaggttcttgtt
cttgctcccacacgtgagatagcggtgcagatccactccgtagtgatggccataggctgt
gccatggagggcctggagtgccatgttttcattggtgggcggcccgtgagtcaggacaaa
ctccacctgaagaagtgccacatagctgtaggctcacctgggcgtattaagcagcttatc
gagctgggcatgctgtccacggccagcgtccgcctgtttgttctggatgaggctgacaag
cttctggaggagggcagcttccaggaacagatcaactggatcttctcctctttgcctgca
aacaaacagatgcttgctctctctgccacctacccagaatcccttgctcaacatcttacc
cgctacatgagcgaacccacatttgtccgactaaaccccagtgacatgggccttaaaggt
ctgaaacagtattacaagctggtgcagtcccatcctctacctcacaaggtgtttgaggag
aaggtgcagcacctgctggagcttttcagcaaaatcccattcaaccaggcactggtgttc
tccaacctccatacaagggctcagcatctggcagacatcctgtcctccaaaggcctacct
gctgtttgtatctcagggggtctgagccaggaccagagactggaggcaatgtccaaactg
aagcagtaccagtgcagagtgctcatctctactgatctgacgtccagaggcatagatgca
gacaaagtgaacttggtgataaacctggatgtgcctcaggactgggagacctacatgcac
cgaattggaagagctggccgcttcggcactcaggggcttgctgtgacctattgttgccat
ggcgaggaggaaaacaagatgatggccatcgctcagaagtgcagcctgagtctgtctctg
ttaccatccaccctagagcctgggttgatggatgagccatgtgactgggatgtctgcacc
gaggcctccgctccagacactttatcacacttctcatccaggacagtgaagaagaagcag
cgggccaagttggtcacaaatcaagaacaagagcagagtattcaaagaaagccagagaag
tgctatcctctaccccgatcagtagcacaacgtgaagaaaatcctggaaaagtatctaca
gccccgactcgaaaagagctgcaagacgctctgccaaagatcccccctctcagctcgttc
aagacaaacaggccgaggtttatgacctttgagaaggctaagcaggactttgagagcttc
atgaccacagggttggggagatcagtggaggtcatcagggagtttagaggtcgagaggac
ggtggcactgatgatctaaacaggcacagagagactgtcatgctgcatgctgacgaagct
caaggctttaagccaaatggaacccaaagaaaatctgactttttacatccgagatcagcc
tcttcttcctcaagctcagaatcagacgatgatgacacaagggaaaccacaagtaatgaa
aagaaggagcctgttatcccttggaataacactaaagcaactcccactacatccgaacca
cagcttgagacaacacaaactgacatttttacaccatctccaccagaaatctacagccag
acaagctctgcatcagactgcacagctttttctaactcctctgaaacctataaatctgca
tcagctgttcaatctagcaggggatctactcaggcggctctatcacacaccaacacaaac
agatcaaaaaaggaaaaaagaggcaaaaacatttcagaggataaagacagacggcgaaag
aaagaaagggaggataaagagcatgatgatggagaggaggaagaggaggagttgagtgca
gaagattactggagatcatgctacagagcctggaatgactactactcctctatgtatcct
tttcaggagcaagggtaccaaaactactacagcgtggcccacaactggatggcagcttat
cgtatgaactcagtttacatggaagaactccaaaaatactaa

DBGET integrated database retrieval system