Cheilinus undulatus (humphead wrasse): 121518482
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Entry
121518482 CDS
T07473
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit-like
KO
K07466
replication factor A1
Organism
cud
Cheilinus undulatus (humphead wrasse)
Pathway
cud03030
DNA replication
cud03420
Nucleotide excision repair
cud03430
Mismatch repair
cud03440
Homologous recombination
cud03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cud00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
121518482
03420 Nucleotide excision repair
121518482
03430 Mismatch repair
121518482
03440 Homologous recombination
121518482
03460 Fanconi anemia pathway
121518482
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cud03000
]
121518482
03032 DNA replication proteins [BR:
cud03032
]
121518482
03400 DNA repair and recombination proteins [BR:
cud03400
]
121518482
Transcription factors [BR:
cud03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
121518482
DNA replication proteins [BR:
cud03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
121518482
DNA repair and recombination proteins [BR:
cud03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
121518482
MMR (mismatch excision repair)
121518482
DSBR (double strand breaks repair)
HR (homologous recombination)
121518482
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
RADX
C1_2
Motif
Other DBs
NCBI-GeneID:
121518482
NCBI-ProteinID:
XP_041656748
LinkDB
All DBs
Position
12:complement(29472173..29540952)
Genome browser
AA seq
662 aa
AA seq
DB search
MSVRLTPGAIQALIRGIDVKNPVLQVLKMRMVPNSSGPPRFRLMMSDSRHTYASFLLATQ
LNYLIEENLLEPHCVCKVKRTIPNKLADGRLVVVVMEMEILQSAMEAGGMIGEPTPYNAD
GKTPSQQDPDSSTSMPASPPPAAVPGPSFSNNNSSRGGRAGISMMKVPPLSTSPMTTSPM
KTSPMKTSPMKTSPMKTSPMKTSPMKASPFKASPGKFSPMKATSSSPGSSTKVIPISQLN
PYQSKWTIRARVTNKSNIRNWSNSKGEGKLFSFEIVDESGEIRITAFNKEVDKFYSLVEQ
GKVYYITKATLKVANKQYCTLNNDYEMTLHANSSIVPCDDSQGVPALHCDFVSIAELENR
DNNDIVDVIGVCKSAEDVSRITTKSSREVSKRALSLIDTTGKVVTATLWGEEAEKFDGSG
QPVVAIKGARLSDFGGRSLSVLFSSTVMVNPDIPEAFRLRGWFDQEGHKLNSQSLTETRS
SGSGAKINWKSLSDIKDEHMGHGEKADYFSCVATVVYIRKENCLYQACPSDGCNKKVIDQ
QNGFYHCEKCNREFPNFKYRLLLSANLADFGDNQWVTCFQETAEVLLGHSAEMLGQLRDT
DEAAFDEVFQKANYTTHVFKNKVKLETYNDEVRLKVTVLEVQPIAHREYSRRLISNIHKL
AG
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtcagacttactccaggggcaattcaggccctgattagaggcattgatgtgaaa
aatcccgtcctacaggtgctgaaaatgcgtatggtccctaatagctccggtccacctcgg
tttcggctgatgatgagtgacagccgacacacgtatgcttctttcctgctagccacacag
ttaaactatttgattgaggagaacctcctggaaccacactgtgtgtgcaaggtgaagagg
actattcccaacaagctggcagatggcagactcgtggtggttgtaatggagatggagata
ctgcagtctgcaatggaagcaggagggatgattggagaacccactccatataatgcagat
ggtaagactccatctcagcaggatccagactctagtacctctatgccagcttcccctcca
cctgcagcagtaccagggccctccttcagcaacaacaacagtagcagaggaggtcgtgct
ggaatctcaatgatgaaagttccccccttgagtacttcacccatgacaacttcacctatg
aaaacttcacctatgaaaacttcacccatgaaaacttcacccatgaaaacttcacccatg
aaaacttctcccatgaaagcttcacccttcaaagcttctcctgggaaattttcacccatg
aaggctacaagctcatctcctggttcttcaacaaaagtgattcctatttctcaactgaac
ccatatcaaagcaagtggaccatcagagccagagtcaccaacaaatcaaacatccgcaac
tggagtaactccaagggagagggcaagctcttttcatttgagatagtggatgagagtgga
gaaatcagaatcacagcctttaataaggaagtggacaagttttactctctagtggagcaa
ggcaaggtgtactacatcaccaaggcaactctaaaggtggccaacaaacagtactgcaca
ctgaataacgactatgagatgaccctccatgccaactcatccattgtgccatgtgatgac
agtcagggcgtccctgcattgcactgtgactttgtgtccattgcagagctggagaacaga
gataacaacgacattgttgatgtgattggagtgtgcaagagtgcggaggatgtgtcccgt
atcaccactaagagcagcagagaagtctccaagagggccctcagcttaatagacacaact
ggcaaagtggtgacagccacattgtggggagaggaggctgagaagtttgacggctcgggg
cagccagtggtcgcaatcaaaggagctcgcttgtctgattttggaggcagatctctctct
gttttgttcagttccacagtcatggtcaacccagacatacccgaggcctttagactgagg
ggctggtttgaccaagaaggccataagctcaacagccaatccctgacagagaccaggtca
tcaggcagtggagcaaagataaactggaaatcactgagtgacattaaagatgagcacatg
ggacatggagagaaggcggattatttcagctgcgtggcgacggtggtgtacattcgtaag
gagaactgtctgtaccaggcctgtccatctgatggctgcaacaagaaggtcatagaccag
cagaacggattttaccactgcgaaaagtgtaacagagagttccccaacttcaaatacaga
ctcctcctttctgccaacttggcagacttcggggataaccagtgggtgacatgcttccag
gagacagctgaggtcctgttaggtcacagcgcagaaatgctgggacagcttagagacaca
gacgaggctgcctttgatgaagtctttcagaaagccaactacacaactcacgtcttcaaa
aacaaagtcaagttggagacgtacaacgatgaggttcgattgaaggtaactgtactggaa
gtccaacccattgcccaccgggaatacagcaggagactcatcagcaacatccacaagctg
gccggataa
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