Cheilinus undulatus (humphead wrasse): 121518900
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Entry
121518900 CDS
T07473
Symbol
supt5h
Name
(RefSeq) transcription elongation factor SPT5 isoform X1
KO
K15172
transcription elongation factor SPT5
Organism
cud
Cheilinus undulatus (humphead wrasse)
Pathway
cud03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
cud00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
121518900 (supt5h)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cud03021
]
121518900 (supt5h)
03019 Messenger RNA biogenesis [BR:
cud03019
]
121518900 (supt5h)
Transcription machinery [BR:
cud03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
121518900 (supt5h)
RNA polymerase I system
121518900 (supt5h)
Messenger RNA biogenesis [BR:
cud03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
121518900 (supt5h)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KOW4_SPT5
KOW
KOW2_Spt5
KOW5_SPT5
KOW7_SPT5
Spt5-NGN
KOW6_SPT5
KOWx_SPT5
Spt5_N
KOW1_SPT5
GPKOW_C
DUF150_C
DUF3912
Ribonuc_P_40
Motif
Other DBs
NCBI-GeneID:
121518900
NCBI-ProteinID:
XP_041657522
LinkDB
All DBs
Position
2:53340904..53383549
Genome browser
AA seq
1084 aa
AA seq
DB search
MSDSDDSDFSDNQSERSSDGEAEEVEENEEEAASPVGSDKVADEEGEDLEDEEEYDEEEE
EDDDERPKKKPRHGGFILDEADVDDEYEDEEDQWEEGAEDILEKVNEEAEVSNIDHVVLD
EDHSGSRRLQNLWRDSREEALGEYYMRKYAKSSGGEHYSGGSEELSDDITQQQLLPGVKD
PNLWTVKCKIGEERATAIALMRKFIAYQFTDTPLQIKSVVAPDHVKGYIYVESYKQTHVK
SAIEGIGNLRMGLWNQQMVPIKEMTDVLKVVKEVTNLKPKSWVRLKRGLYKDDIAQVDYV
EPSQNTISLKMIPRIDLDRIKAKMSLKDWFAKRKKFKRPAQRLFDAEKIRSLGGEVSHDG
DFMIFEGNRYSRKGFLFKSFAMSAVITDGVKPTLSELEKFEDQPEGIDLEVVTESGSKER
EHNLQAGDNVEVCEGELINLQGKILSVDGNKITIMPKHEDLKDPLEFPAHELKKYFRMGD
HVKVIAGRYEGDTGLIVRVEENFVILFSDLTMHELKVLPRDLQLCSETASGVDAGGQHEW
GELVQLDPQTVGVIVRLERETFQVLNMHGKVLTVRHQAVNRRKDNRFAVALDSEQNNIHV
KDIVKVIDGPHSGREGEIRHLYRGYAFLHCKKLVENGGMFVCKTRHLVLAGGSKPRDVTN
FTVGGFAPMSPRISSPMHHGGGGAQQRGGGGGGMGRGRGRRDNELIGQTVRISQGPYKGY
IGVVKDATESTARVELHSTCQTISVDRQRLTTMGAKRHSGMTSTHGRTPSYGSQTPMYGT
GSRTPMYGSQTPLHDGSRTPHYGSQTPLHDGSRTPGQSGAWDPSNPNTPSRNDEEYDFGY
DDEPSPSPQGYGGTPNPQTPGYPEVPSPQVNPQYNPQTPGTPAMYNTEQYSPYAAPSPQG
SYQPSPSPQSYHQVAPSPVGYQNTHSPASYHPTPSPMAYQASPSPSPVGYSPMTPGAPSP
GGYNPHTPGSNIEQGSSDWVTTDILVRVKDSFMDLMGQTGVIRSVTGGMCSVFMQESEKV
VSISSDHLEPITPTKNNKVKVILGEDREATGILLSIDGDDGIVRMELDDQLKILNLRFLG
RLEH
NT seq
3255 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacagcgatgacagcgacttctctgacaaccagagtgagcgaagcagcgacgga
gaggccgaggaggtggaggaaaatgaggaggaggcagccagccctgtaggcagcgacaag
gtggcagacgaggagggagaggacctggaggatgaggaggaatatgacgaagaggaggaa
gaggatgatgatgaacgtcccaagaagaagccgagacatggaggctttatcctggatgag
gccgatgtggacgatgagtatgaagatgaggaagatcagtgggaggaaggtgctgaagac
atcctggagaaagttaacgaagaggctgaagtgtctaacatcgaccatgtggtcctggat
gaagaccactctggatccaggaggctgcagaacctctggagagactccagagaggaggcg
ctgggagaatactacatgaggaagtatgccaagtcttcaggaggggagcattactcagga
gggtctgaggagctctctgatgacattactcagcagcagctacttcctggagtcaaggat
cccaacctgtggacggtgaagtgtaagatcggagaggagagggcgacggccatcgcattg
atgaggaaattcatcgcttaccagttcacagacacgcctctgcagatcaagtccgttgtc
gctccggatcacgtcaaaggttacatatacgtggaatcgtacaagcagacgcacgtcaag
tcggccatcgaaggcatcgggaacctgaggatgggtctgtggaaccagcagatggttccc
atcaaagaaatgacagacgtcctcaaggtggtcaaagaggtcacgaatctgaagccaaag
tcctgggtccggctgaagagaggcctgtacaaggacgacatcgctcaggtggactacgtg
gagccgagtcagaacaccatctccctgaagatgatcccccgtatagacctggaccgaatc
aaagccaagatgagcctgaaagattggtttgctaagaggaagaagttcaagagacctgct
cagaggctgtttgatgctgaaaagatcaggtcccttggcggggaggttagccatgatgga
gacttcatgatctttgaggggaaccgatacagccgcaaaggattcctgtttaagagcttc
gccatgtcggctgtgatcacggacggagtgaagcccactttgtcggagctggagaagttt
gaagaccagcctgaaggaatcgacctggaggtggtgactgagtcaggtagtaaagagcgt
gaacacaacctgcaggcaggagacaacgtggaggtgtgtgagggagagttgatcaacctg
cagggaaaaatcctcagtgtggacggaaacaagatcaccatcatgcccaaacacgaagat
ctgaaggatcctcttgagttccccgctcacgagttgaaaaaatatttccgtatgggcgac
cacgtgaaggtgatcgccgggcgttatgaaggagacacgggtctcatcgtcagagtggag
gagaactttgtcatcctgttctccgacctcaccatgcacgagttgaaagtgttgcccaga
gatctgcagctctgctcggagacggcatccggcgttgacgcaggagggcagcatgagtgg
ggggagctggtccagctggacccccagactgttggagtcatcgtcaggctggagagagag
acgttccaggtgttgaacatgcacgggaaggttctgacagttcgccaccaggctgtaaac
cgcaggaaggacaaccgctttgctgtggctctggactcggagcagaacaacatccatgtt
aaagacatcgtcaaagtcatcgacgggccgcactctggccgtgaaggtgagatccgtcac
ctgtacagaggctacgccttcctccactgtaagaagctggtggagaatggcggcatgttc
gtctgtaagaccagacacctggtgttagccggagggtccaagccccgggacgtgacgaac
ttcaccgtgggaggatttgcaccgatgagtcctcgaatcagcagtcccatgcatcatggt
ggaggaggcgctcagcaaagaggaggcggcggaggaggaatggggcggggcagaggaagg
agagacaacgagctgattggccagacggtccgtatctcccagggtccttacaaaggttac
attggtgtggtgaaggacgccacggagtctacagcccgagtagagctgcactccacctgc
cagaccatctctgtagacagacagcgcttaaccaccatgggagcaaagagacacagtggg
atgacctccacccacggccgtacgcccagttatggctcccagactcccatgtatggtact
ggatccagaacacccatgtacgggtctcagacgccactgcatgatggaagccgcacgcct
cactatggatctcaaaccccactgcatgatgggagcaggacaccaggtcagagtggagct
tgggaccccagcaatcccaatacaccttccaggaatgatgaggagtacgactttggctat
gacgacgagccctccccgtcccctcagggttatggtgggacccccaacccccagacccca
ggttacccagaagtcccgtctccacaggtcaaccctcagtacaaccctcagacgcctggc
acgcctgctatgtataacacagagcagtactccccctatgctgccccgtcacctcagggc
tcctaccagcccagccccagtcctcagagctaccatcaggtagcgccctcgccagtcggc
taccagaacacacactctccagccagctaccacccaactccctcccccatggcttaccag
gccagtcctagtcccagtccggtaggctacagtcccatgactcctggagcgccctctcct
ggaggttacaaccctcacaccccaggctccaacatcgagcagggcagcagcgactgggtg
accaccgacatcctcgtccgggtcaaggactccttcatggatctgatgggacagaccggg
gtcatcaggagcgtcacgggagggatgtgttcagtgttcatgcaggagtcggagaaggtg
gtcagtatcagcagcgatcacctggagcccatcaccccgaccaagaacaacaaggtgaag
gtgattcttggagaagaccgcgaggcgacggggatcctgctgagcatcgatggggacgac
ggcatcgtccgcatggagctggacgaccaactgaagatcctcaacctgcggttcctggga
cgcctggagcactga
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