KEGG   Cheilinus undulatus (humphead wrasse): 121518925
Entry
121518925         CDS       T07473                                 
Symbol
rabgef1
Name
(RefSeq) rab5 GDP/GTP exchange factor
  KO
K20131  Rab5 GDP/GTP exchange factor
Organism
cud  Cheilinus undulatus (humphead wrasse)
Pathway
cud04137  Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:cud00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04137 Mitophagy - animal
    121518925 (rabgef1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cud04131]
    121518925 (rabgef1)
Membrane trafficking [BR:cud04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab associated proteins
    121518925 (rabgef1)
 Protein recycling
   Other Rab GTPase associated proteins
    121518925 (rabgef1)
SSDB
Motif
Pfam: VPS9 DUF5601 zf-A20 RecG_N Sulfotransfer_3
Other DBs
NCBI-GeneID: 121518925
NCBI-ProteinID: XP_041657557
LinkDB
Position
12:44280756..44296656
AA seq 513 aa
MSQRTERRGIHVDQSDLLCKKGCGYYGNAAWQGLCSKCWREEYQRVRQKQIQDDWALAEK
LQREEEAAYASSHGAQTQSHSQSAAPAPQPHPGHASLGPFSKFEEKKTNEKTRKVTTVKK
FFSPSSRTAPKKETQESRTTSPSLSRHASFESDQVSKDFVEFLKNLQKPGREIHKQSRAF
IMNMSSKKDLSADELSECVQDFYQNMADRLMSHFKGSSESVEQVMDQVEKYIMTRLYKSV
FCPETTDDEKKDLATQKRIRALHWVTIQMLCVSMDEEIPEVSENVVKAITDIIEMDSKRV
PRDKLGCITRCSKHIFSAIRITKNEPASADDFLPALIYIVLKANPPRLQSNIQYITRFCN
PSRLMTGEDGYYFTNLCCAAAFIEKLDAQSLNLSPEEFERYMSGQASPRINSSEGEWPGP
GPADVATNPVLAQLNHNLELLSSLSSRQESVMEAAQSLQADLLSWPELVKREVQDILEKY
PLEILPRKVNAIDANNMDNDNLPPPLTPQVFAG
NT seq 1542 nt   +upstreamnt  +downstreamnt
atgagtcagcggactgagcgacgggggatacatgtggaccaatcagacctgctgtgcaaa
aagggatgcggttactatggcaacgcagcatggcagggcctgtgctccaagtgctggagg
gaggagtaccagcgggtacggcagaaacagatccaggacgactgggccttggcagagaag
ttgcagcgagaggaggaggcagcgtatgccagcagtcatggagcgcagacgcagtctcac
tctcagtctgcagcaccagcaccacagcctcacccaggacacgcctcgctgggaccgttc
tccaagtttgaggagaagaaaaccaatgagaagactcggaaagtgacaacagttaagaag
tttttcagcccttcatcacgcaccgctccaaagaaagaaacccaagaaagcagaaccacc
agtccatctctcagccgccacgccagctttgaatcagaccaagtgtccaaggacttcgtg
gagttcttgaaaaacctccagaagccaggcagggagatccataagcagtccagagccttt
attatgaacatgtccagcaaaaaggacctgagtgctgacgagctgtctgaatgtgttcag
gatttctaccagaacatggccgaccgcttaatgagccactttaaaggctcttcagagtcc
gtggagcaggtgatggaccaggtagagaagtacataatgactcgtctgtataagagcgtg
ttttgtcctgaaaccactgatgatgagaagaaggacttggccacacagaagaggatcagg
gctttacactgggtcaccatccagatgctgtgtgtgtctatggatgaggaaatcccagaa
gtctctgagaatgtggtcaaagcaataacagatatcattgagatggactcaaagagagtt
cctcgggacaaactcggctgcatcacacgctgcagtaaacacatcttcagcgccatcaga
atcacaaagaacgagccggcttcagccgacgacttcctccccgcgctcatttacatcgtg
ctgaaggccaaccctccacggcttcagtccaacatccagtacatcacccgcttttgcaac
cccagcaggctgatgaccggcgaggacggatactacttcactaacctgtgctgtgcagcg
gcttttatcgagaagttggatgctcaatccctcaacctttcccctgaggaatttgagcgc
tacatgtcaggccaagcctctccgcgcatcaacagctctgaaggtgagtggcccggacct
ggcccggcagacgtggccaccaaccctgtcctggctcagctcaaccacaacctggagctg
ctgtcgagcctcagcagccgacaggagtcagtgatggaggcggctcagagcctgcaggcc
gacctcctctcctggcctgagcttgtgaagcgggaggtgcaagacatcctggagaaatac
cctctggagatccttccacgcaaagtgaacgccatcgatgccaataatatggacaatgac
aacctgccaccgccactcacaccccaggtgtttgctgggtag

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