Cheilinus undulatus (humphead wrasse): 121518925
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Entry
121518925 CDS
T07473
Symbol
rabgef1
Name
(RefSeq) rab5 GDP/GTP exchange factor
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
cud
Cheilinus undulatus (humphead wrasse)
Pathway
cud04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
cud00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
121518925 (rabgef1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cud04131
]
121518925 (rabgef1)
Membrane trafficking [BR:
cud04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
121518925 (rabgef1)
Protein recycling
Other Rab GTPase associated proteins
121518925 (rabgef1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS9
DUF5601
zf-A20
RecG_N
Sulfotransfer_3
Motif
Other DBs
NCBI-GeneID:
121518925
NCBI-ProteinID:
XP_041657557
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All DBs
Position
12:44280756..44296656
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AA seq
513 aa
AA seq
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MSQRTERRGIHVDQSDLLCKKGCGYYGNAAWQGLCSKCWREEYQRVRQKQIQDDWALAEK
LQREEEAAYASSHGAQTQSHSQSAAPAPQPHPGHASLGPFSKFEEKKTNEKTRKVTTVKK
FFSPSSRTAPKKETQESRTTSPSLSRHASFESDQVSKDFVEFLKNLQKPGREIHKQSRAF
IMNMSSKKDLSADELSECVQDFYQNMADRLMSHFKGSSESVEQVMDQVEKYIMTRLYKSV
FCPETTDDEKKDLATQKRIRALHWVTIQMLCVSMDEEIPEVSENVVKAITDIIEMDSKRV
PRDKLGCITRCSKHIFSAIRITKNEPASADDFLPALIYIVLKANPPRLQSNIQYITRFCN
PSRLMTGEDGYYFTNLCCAAAFIEKLDAQSLNLSPEEFERYMSGQASPRINSSEGEWPGP
GPADVATNPVLAQLNHNLELLSSLSSRQESVMEAAQSLQADLLSWPELVKREVQDILEKY
PLEILPRKVNAIDANNMDNDNLPPPLTPQVFAG
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgagtcagcggactgagcgacgggggatacatgtggaccaatcagacctgctgtgcaaa
aagggatgcggttactatggcaacgcagcatggcagggcctgtgctccaagtgctggagg
gaggagtaccagcgggtacggcagaaacagatccaggacgactgggccttggcagagaag
ttgcagcgagaggaggaggcagcgtatgccagcagtcatggagcgcagacgcagtctcac
tctcagtctgcagcaccagcaccacagcctcacccaggacacgcctcgctgggaccgttc
tccaagtttgaggagaagaaaaccaatgagaagactcggaaagtgacaacagttaagaag
tttttcagcccttcatcacgcaccgctccaaagaaagaaacccaagaaagcagaaccacc
agtccatctctcagccgccacgccagctttgaatcagaccaagtgtccaaggacttcgtg
gagttcttgaaaaacctccagaagccaggcagggagatccataagcagtccagagccttt
attatgaacatgtccagcaaaaaggacctgagtgctgacgagctgtctgaatgtgttcag
gatttctaccagaacatggccgaccgcttaatgagccactttaaaggctcttcagagtcc
gtggagcaggtgatggaccaggtagagaagtacataatgactcgtctgtataagagcgtg
ttttgtcctgaaaccactgatgatgagaagaaggacttggccacacagaagaggatcagg
gctttacactgggtcaccatccagatgctgtgtgtgtctatggatgaggaaatcccagaa
gtctctgagaatgtggtcaaagcaataacagatatcattgagatggactcaaagagagtt
cctcgggacaaactcggctgcatcacacgctgcagtaaacacatcttcagcgccatcaga
atcacaaagaacgagccggcttcagccgacgacttcctccccgcgctcatttacatcgtg
ctgaaggccaaccctccacggcttcagtccaacatccagtacatcacccgcttttgcaac
cccagcaggctgatgaccggcgaggacggatactacttcactaacctgtgctgtgcagcg
gcttttatcgagaagttggatgctcaatccctcaacctttcccctgaggaatttgagcgc
tacatgtcaggccaagcctctccgcgcatcaacagctctgaaggtgagtggcccggacct
ggcccggcagacgtggccaccaaccctgtcctggctcagctcaaccacaacctggagctg
ctgtcgagcctcagcagccgacaggagtcagtgatggaggcggctcagagcctgcaggcc
gacctcctctcctggcctgagcttgtgaagcgggaggtgcaagacatcctggagaaatac
cctctggagatccttccacgcaaagtgaacgccatcgatgccaataatatggacaatgac
aacctgccaccgccactcacaccccaggtgtttgctgggtag
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