Cheilinus undulatus (humphead wrasse): 121518946
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Entry
121518946 CDS
T07473
Symbol
rad50
Name
(RefSeq) DNA repair protein RAD50
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
cud
Cheilinus undulatus (humphead wrasse)
Pathway
cud03440
Homologous recombination
cud03450
Non-homologous end-joining
cud04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
cud00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
121518946 (rad50)
03450 Non-homologous end-joining
121518946 (rad50)
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
121518946 (rad50)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cud03032
]
121518946 (rad50)
03400 DNA repair and recombination proteins [BR:
cud03400
]
121518946 (rad50)
DNA replication proteins [BR:
cud03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
121518946 (rad50)
DNA repair and recombination proteins [BR:
cud03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
121518946 (rad50)
BRCA1-C complex
121518946 (rad50)
NHEJ (non-homologous end-joining)
MRX complex
121518946 (rad50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
Rad50_zn_hook
AAA_21
SMC_N
SbcC_Walker_B
ABC_tran
AAA_15
AAA_29
AAA_13
AAA_22
AAA_16
zf-met
Motif
Other DBs
NCBI-GeneID:
121518946
NCBI-ProteinID:
XP_041657585
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All DBs
Position
12:24770822..24807697
Genome browser
AA seq
1312 aa
AA seq
DB search
MSKIDKMSILGVRSFGIEDKDKQVISFFSPLTVLVGPNGAGKTTIIECLKYATSGELPPG
AKGAAFVHDPKDAHETDVRAQIRLLFTDVNGEKVTIQRSMSCTQKAKNYTFKSLEQVITR
MKGSERVSLSSKCGELDREMISSLGVSKPVLNHVIFCHQEESNWPLSEGKALKEKFDSIF
AATKYIKALETMRQLRLKQSQTVKECQVELRYLKQNKEKAQQIREIIATKEAQLMSSKDS
IQQIENQIDPLEIRLTDIDMKLGKVMKLDNDIKALDSRKKQMEEDNKELEEKMEQVFQGS
DEQLQDIYQNHQRTVREKERRLTDCQKELEKAGRECQRLNRVKADLLVEQGRLQLEADRQ
TQNIKNRDTQVRSLSSYLEMEGYDRPPFTSLQLESFKRNVTQRLEQEKDTATQVLADLQE
KEQGKQNSIDEMRDKKTGLERTVELKRDLQGKKQQELRNVRAELQRLEGSSSRLQELENE
LAKAERELQSVVQNANVEELKAEVVELQKEKSELDHAQRQLDKEMEMLNTHTTARTQMDM
LKKDKTEKEEQVRKIKSRHSEDLVSLLGHFPNKRELEDWIYAKSKEINSTRDRLAKINKD
LASSEQNKSHIAAEVRKKEQQLANDQEKFFNVCGSQDLEQDLTKLQEDLEKVSKQRAMLA
GATAVYTQFISQLTEEREPCCPVCQRTFLSESDLQEVISDMQSKLRLVPDKLKNTEQDLK
RKERKRDEMVALRPVRQSIIQFEEKELPELRNRLQTVNREIERLKGDVEEQETLLGTLMS
EEETAKACLQDISLMDRYVMDLREVERKIAQHAAKLQGVDLTRTIQQVSQEKQETQHKLD
TTSSKMELKRKLIQDQQDQIQMLKSAVNETRAEKLQLSSDMQKQQQLEEQCVEFTSEIQN
LTRDIREAKEQLSPLSAALEKLQQEKQELMERRRQKQEEGQEKINAIKEREKVIITLEKE
INKYINEGKDQYKEQKESELQETNTQLHEAEKHKEKINKEMGNIRQDIDTQKVQERWLQD
NLTLRKRVEELKEVVAKREALMKDMGNMQVMQLRQERRDSERKLEDLKKNRSVALGRQKG
FEEEILHYKKELREDQYDKADERYKDKMITLRTTELVIKDLDLYYKALDQTIMKFHSMKM
DEINKIIRDLWRSTYRGQDIEYVEIRSDVDENASAGVRRRVYNYRVVMVKGDTALDMRGR
CSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDRDNIESLAHALVEIIKSRSRQR
NFQLLIITHDEDFVELLGRSSYIEHFYRIRKNQDQNSEITKCSISSLSSYLH
NT seq
3939 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaaatagacaagatgagcatccttggggtgaggagctttgggattgaggacaaa
gacaaacaagtgatctctttcttctctcctctgactgtattggttgggccaaacggagca
ggaaaaacgactattatagagtgtctaaaatatgcaacatcaggagaacttccccctgga
gctaaaggagctgcctttgtccatgatccaaaggatgcccatgagacagatgtgcgagca
cagattcgtctcttatttactgacgtgaacggagagaaggtgacgatccagcgctccatg
tcttgcactcaaaaggctaaaaactacacctttaaaagtttggagcaggtcattaccaga
atgaagggcagtgagagggtgagcttgtcatcaaagtgtggtgaactagaccgggagatg
atctcctctctgggtgtatcaaagcctgtcttgaatcacgtcatcttctgtcaccaagaa
gagtcgaactggccacttagcgagggcaaagcgctcaaagaaaagtttgactccatcttt
gctgcaacaaagtatatcaaagctctggagacgatgcgccagctgcgtctcaaacagagt
cagacagtcaaagagtgtcaggtggagctgcgctacctgaagcagaacaaggagaaagcc
cagcagatcagagagatcatagccaccaaggaggctcagctgatgtcctctaaagacagc
atccagcagatagagaaccagatcgatccactggagattagactgactgatattgacatg
aaactggggaaagtgatgaaactggacaacgacatcaaggctttagacagcagaaagaaa
cagatggaggaggacaacaaggagcttgaggaaaaaatggaacaggtgtttcaaggttca
gatgagcaactgcaggacatttaccagaaccatcagaggacagtaagggagaaggagcgc
aggctgaccgactgccagaaggagctggagaaggctggccgggagtgtcagagacttaac
agagttaaagctgatctcctggtagaacaaggtcgtcttcaacttgaagctgaccgccaa
actcaaaacatcaagaaccgtgacactcaggttcgctctctgtcatcttatctggagatg
gagggttatgaccgtcctcccttcacttctcttcaacttgaaagcttcaagcgtaacgtc
acacagaggctggagcaggaaaaagacacagccactcaggttctggcggacctgcaggaa
aaagagcagggtaagcagaactccatagatgaaatgagggataagaagactggcctggag
aggactgtggagcttaagagagacctgcagggaaagaaacaacaagaactgaggaatgtg
agggcagagctacagaggctggagggatcatccagccgactgcaggagctggagaacgaa
ctggccaaagcggagcgtgagttacagagtgtggttcaaaacgccaatgtagaggagcta
aaggccgaagtggttgagcttcagaaggaaaaatctgaactggaccatgcacagagacag
ctggacaaagagatggagatgctcaacacacacaccactgcacggacacagatggacatg
ttaaaaaaggacaagactgagaaggaggagcaggttcgtaagatcaagtctcgtcacagc
gaagatctggtgtcactgctcggtcactttcctaacaagagagagctggaggactggatc
tatgccaagtctaaagaaatcaacagtactagggacagacttgccaaaatcaataaggac
ctggcatcaagtgagcagaataaaagccacattgctgctgaggtacggaaaaaggaacag
cagctagcaaacgaccaagaaaagttctttaatgtgtgtggcagtcaggatctggagcag
gacctgaccaaactgcaagaggacctggaaaaagtctccaaacaaagagccatgttggct
ggagccacagcagtgtacactcagttcatcagccagctgacggaggagagagagccctgc
tgccctgtgtgtcagcggacattcctctccgagtcggatctgcaggaagtcatcagcgac
atgcagtccaagctacgcctggtgccagacaagctgaaaaacacagagcaggatctgaag
aggaaggagaggaagagagatgagatggtggctctcagacctgtcaggcagtccatcata
cagtttgaggaaaaggagctgcctgagttgagaaaccgcttgcagacagtgaacagagaa
atcgaaaggctgaagggcgatgtggaggagcaagaaactctgcttggtaccctaatgtcg
gaggaggaaacggcaaaggcctgccttcaggacatctcacttatggacagatatgtgatg
gacctaagagaggttgagaggaaaatagctcagcatgcagccaaactccagggagttgac
ctgacaagaacaatccagcaagtcagtcaggagaaacaagaaactcagcacaagcttgac
accacctcgagcaagatggagctgaaacgtaagctgatccaggaccagcaggatcagatt
cagatgcttaaaagtgccgtgaacgagacgagggcagagaaacttcagctgagcagcgat
atgcagaaacagcagcagctggaggagcagtgtgtcgagttcacctctgaaatacaaaac
ttaacccgggacatcagggaagcgaaggaacagttgtctcctttatctgctgctctggag
aagctgcagcaagagaagcaggagctgatggagcgcaggaggcagaagcaggaagagggc
caggagaagatcaatgccattaaagagcgagagaaggtgatcataacattggaaaaagag
atcaacaaatacatcaacgaaggaaaagatcaatacaaagagcaaaaagagtctgagctt
caagaaaccaacacgcagctccatgaagctgagaagcataaagaaaagatcaacaaggag
atgggaaacattcgtcaggacatagacactcagaaggtccaggagcgctggcttcaggac
aacctgacactgaggaagcgagttgaggagttgaaggaggttgttgcaaaacgtgaagct
ctaatgaaggacatgggcaacatgcaagtcatgcagctgcgccaagaacgacgtgattct
gaacgcaagttggaggatttgaagaagaaccgcagtgttgcactgggtcgacaaaaaggc
tttgaggaggagatactgcattacaaaaaagagctgcgagaagatcagtatgacaaagca
gacgagcgctacaaagacaagatgatcacattgaggaccacagagctggtcatcaaagac
ctggatctctattacaaggcccttgatcaaaccatcatgaaatttcacagcatgaagatg
gatgagatcaacaagattatcagagacctgtggcgcagcacctacaggggtcaagatatt
gagtatgtagagatcaggtccgatgtggacgagaacgcttctgcaggagtcaggcgaaga
gtttacaactacagagttgtgatggtgaaaggagacacagctttggatatgagaggacgc
tgtagtgcgggtcagaaggtgctggcatccctgatcattagactagccctggcagagact
ttctgtctaaactgtgggatcctagccctggatgaacccaccaccaacctggaccgggac
aacattgagtcactcgcacatgcccttgtggaaatcattaagagtcggtctcgccagcgc
aacttccagctgctgatcatcacccatgatgaggactttgtggagctgttgggtcggtcc
agctacatcgagcacttctatcgcatccgaaagaaccaagaccagaactctgagatcaca
aagtgcagcatcagctccctctcttcttaccttcactga
DBGET
integrated database retrieval system