Cheilinus undulatus (humphead wrasse): 121518951
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Entry
121518951 CDS
T07473
Symbol
ltn1
Name
(RefSeq) E3 ubiquitin-protein ligase listerin
KO
K22377
E3 ubiquitin-protein ligase listerin [EC:
2.3.2.27
]
Organism
cud
Cheilinus undulatus (humphead wrasse)
Brite
KEGG Orthology (KO) [BR:
cud00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cud03009
]
121518951 (ltn1)
04121 Ubiquitin system [BR:
cud04121
]
121518951 (ltn1)
Enzymes [BR:
cud01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121518951 (ltn1)
Ribosome biogenesis [BR:
cud03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
121518951 (ltn1)
Ubiquitin system [BR:
cud04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
121518951 (ltn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ltn1_1st
LTN1_E3_ligase_6th
UBC_like
LTN1_E3_ligase_5th
zf-RING_2
HEAT_GCN1
zf-ANAPC11
FANCL_C
RINGv
zf-rbx1
zf-RING-like
zf-RING_16
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
121518951
NCBI-ProteinID:
XP_041657592
LinkDB
All DBs
Position
LG12
Genome browser
AA seq
1765 aa
AA seq
DB search
MGGKNKQRTKGNVRPSSSGRAAEVLTREGGVIPGFVGFDTALTSELSYVPAVHGAEEIDN
LVDADFRLVLRKLSKRDVVTRLKAVQDFGSMCQERDAEEVKGVLPYWPRIYCKIAVDHDR
RIREATQQAFEQLVLKVRRSLAPFLKSLMGHWILSQCDPYTPAASAACQAFQAAFSPAKQ
PEALSFCKDEILNVLQDILLKETADTLSDPQSLTEEERAAKYVRMLTSSLLGVKRLLSLL
LQSDRTALEQRLANLVNSGKFWKYSKHKTAQVRGAFFEMVCALCEFTPGLVQAEAARLCP
AVLLSIDDTDPVVVPPVWEAVLHVVSTIPDCWSHANAKKGFLPKLWSQLKEGGKGMAKAL
HPNLMPLLSKLPKEVTDPTLDFYTTFFTSFMQGLSSERALTSPSESAVIVTSLVECLRYC
IMNNIEEEDEQKKIRTMLVSQQLLPLLEKALSNPSLQNGPLFLLVTEMLVSWEKRAGLQG
EGETNEGKEVFKELLVDFWEELGLMFVRYVDNEDADPQALEGVATLLQVMRHPDRVKRKH
VQKKKSVKICFSKPDEEKTGVDGDAVERPVQTESESVNERVCSPQTQHFEDVVCQLAQLC
LVHVNEKKSEKHLVFLSLLLRSFHTPRVFSTLVELDKIKDVAQHEEGNIKNPAMQFLLEQ
VVVWLAEQGRTDTEHLVEMVFSSLYCCSSQETTRILNHITMMDLQWRIILQIIQRACVDP
ETLKSCRDWLKGSVLGERLLGLTEELCKVGSSSSSSSFGTSSHSWTLISLVLSQHHNNEA
LIGEVYMEQILEKLHATLSEAKSLSDAGNMEPLISFICDVAATFFSSVQDCLLLSSAEEL
LFTVFQFTAKDQTHSHLSDSLLGKLRKVCVAGVQSLTQQPDYEFKEGGFLQSAAIWVTGQ
LLIVSSIKSFQVLVQAVQSLVETMISVCNQDSPLVAQFFTALMPSHTEWTRMRRALPPQW
MKTPLLSGRYRGVLEKLSMDMWKSKLPTKLPAHLCVCALLGRVARTVAFMPGDQKEAERS
LHLPNLKYAVSELLYALQWCKEVEYSPALVSSYHNMLTDWGLSEGLHSLVPTKELLETLY
LRSVEDGGLWSLTLENYIHTNSLEADHSSTLRKLYGSANSLFPASQSKLSTLQVLCPTMT
KEDREALLALATAGIINWQENDDVYGCVAVLMCCLNANSHVEEEVVLAILATLMEWRNSK
EDWFLFGSDLSKVTAEQLNLTVEMMRFLSWLVSHCPTVLGGSHWDFLLCAMLAWLEASSE
NVSSLWNPWVQLFVCENAALIVTLNHFFTSSPPEVLEQLPAELAGEWRDFFVEGIYNLLL
PLPISITDTFSEPDDPVFPLAVLQSAGKTLTFVPVQQLVQNSLPPKFIADQKTNLPEPLQ
TLLNTFCPLLLFKARPLQITVYHLLEKVMPQLPECDGEGDTNKSDDDRDEPCLSPPASLM
AILSTCEELCDNILAGVQVGEFAVVQPLSVEYSCILGYLLAWKLLLTFFKSSPSHLRAHY
AQYLKRSCSLNKLLLHLFKLMPENPNYPGQGAETKESRTFFTESLSLTVDQSKSVEWELP
HLACSVYYSTVQDLPAMVRLWWNSQEKRVSAAVEKFTTKYVSPVLSGQEISSVHGSTQMF
ENMTVKARSAAREVIATYSVDDIFIELVIQLPQNHPLGSITVESGRRVGVAVQQWRNWML
QLSTYLTHQNGTIMEGLALWKNNVDKRFEGIEDCMICFSVIHGSNYSLPKKACRTCKKKF
HSACLYKWFTSSNKSTCPLCRETFF
NT seq
5298 nt
NT seq
+upstream
nt +downstream
nt
atgggggggaagaataaacaacgaacaaaaggaaatgttcggccgtccagtagcggtcga
gctgcggaggttcttacccgggaaggtggtgtcatccctggctttgtcggcttcgacacg
gcgcttacctccgagctgagttatgtccctgctgttcacggggcagaggagatagacaac
ctggtagatgctgacttccgactggtgctaaggaaactttctaagagggatgttgtcacc
cgactgaaagctgttcaggattttgggtccatgtgtcaggaacgggatgctgaagaggtt
aaaggggttctgccatactggcctaggatttactgcaagatagcagtggaccatgatcgc
aggatcagggaggccacccagcaggctttcgagcagctggtgctgaaagttcgacgcagt
ttggcccccttcctgaagagcttgatgggccactggattctgtcccagtgtgacccttac
acacctgcagcctctgctgcctgccaggccttccaggctgccttttcacctgccaaacaa
ccagaggcgctcagcttctgcaaagatgaaatccttaatgttcttcaagatattttgtta
aaggaaacagcagacactcttagtgacccacaaagtttgaccgaagaggagagagcagca
aaatatgtacgcatgctgaccagttctctgctgggagttaaaagactgctctccctgctg
ctccagagtgacaggacagccctggagcaaagactggcaaatcttgtcaactctgggaag
ttctggaagtacagcaaacataagacagctcaggtgagaggggccttttttgagatggtg
tgcgctctgtgtgagttcactccaggattggtccaggctgaagcagcacgactctgccct
gctgttctcctcagcatcgatgacacagatccagtagtggtacctcctgtgtgggaagct
gtccttcacgttgtttccaccatcccggactgctggtcacatgccaatgccaagaaggga
ttcttaccaaaactatggagtcaactaaaagagggaggcaaaggcatggctaaagccctg
cacccaaacctgatgccgctcctgagtaagcttcccaaagaggtcactgatccaacgttg
gacttctacacaactttcttcacttcattcatgcaaggtctgtccagtgagcgtgcctta
acaagcccctcagagagtgcagtaatagtgacttctcttgtcgagtgcttgaggtattgc
atcatgaacaatatagaagaagaggatgagcagaaaaaaatacggaccatgcttgtttca
cagcagctactcccactgctagagaaggctctcagtaacccgtccctacagaacggtccc
cttttccttctggtcacggagatgctcgtatcctgggagaagagggctggtttacaaggg
gaaggtgaaacaaatgaaggcaaggaagtctttaaagagctcctggtagacttctgggag
gagctcggtttgatgtttgtgcgctatgtggacaatgaggacgcagatccacaggcttta
gaaggggttgctaccttactgcaggtgatgcgtcaccctgacagagtaaaaagaaagcac
gtccagaagaagaaatctgtcaagatctgtttctctaagcccgatgaggagaaaactgga
gtggacggggatgctgtggagaggcctgtgcagacagagtctgagtccgtgaatgagagg
gtctgctccccacagactcagcattttgaggatgtggtgtgccagctggcacagctctgc
ctggtgcatgtcaatgagaaaaagtctgaaaaacatcttgtcttcctctcccttcttctg
cgctctttccatacgcccagagtcttcagtacattggttgaacttgataaaataaaggac
gtcgctcagcatgaagaaggtaacattaaaaacccggcaatgcagttcctgttggagcag
gtggtggtgtggctggctgagcagggacgcacagacaccgagcacctggtggagatggtc
ttcagctccctgtactgctgcagctcccaggagaccacacgcatcctcaaccacatcact
atgatggatttacagtggagaataatcctccaaattatacagagggcatgtgtagacccg
gagactcttaagagctgcagagattggctgaaaggttcagttctgggtgagcgcctcctg
ggattgactgaggagctctgcaaggtgggaagcagctcttcgagttcttcctttggtaca
agcagccacagttggacgcttatcagccttgtgctttctcaacaccacaacaatgaagca
ctcataggtgaggtgtacatggagcagattttagagaagctccacgccactctgtctgag
gccaagagtctgtcggatgcaggcaacatggagccgctcatctccttcatctgtgacgtg
gccgccaccttcttctcctctgtacaagactgtcttctgctaagctctgcagaggaactc
ctattcacagtctttcaattcacagccaaagatcaaacccactctcacttgtctgattca
cttttaggcaagctgaggaaagtgtgtgtagctggggtccagtcactgacccaacaacct
gattatgagttcaaagaaggcggtttcctgcagagtgcagccatttgggtgacaggacaa
ctactcattgtttcaagcatcaaaagtttccaggttctggtccaagctgtacagagctta
gtggagacgatgatctctgtctgcaatcaagactctccccttgttgcccagttctttact
gcactgatgccaagccacacagaatggacaagaatgagacgagcattacctcctcaatgg
atgaagactcccttactgtctggtcggtacagaggagttctggagaaactctccatggat
atgtggaagtctaagttaccaaccaagctaccagcccacctgtgtgtgtgtgctctgctg
gggagagtcgctcggacagtggcgtttatgcctggagaccaaaaagaggcagaacgctct
ttacatctgccaaaccttaaatacgcagtttctgagctattgtatgcactgcagtggtgt
aaggaggtagagtacagccctgccttagtgtcctcttaccacaacatgctgactgactgg
gggctgtcagaggggctgcacagcctggttccaacaaaggagctcctggagactctttac
ttaaggtctgtggaggatggcggtctttggtctttgaccctagaaaactacatccacacc
aacagcttggaagcggatcacagttccaccttgaggaagctttatggcagtgccaacagt
ttgttcccagcgtctcagagcaaactgagcactctccaggtgctctgccccaccatgacc
aaggaagacagggaggctctcctcgccctggctacagctggaataatcaactggcaggag
aacgatgatgtatatgggtgtgtagcagtgctgatgtgctgcctgaacgctaactcgcat
gtagaggaggaggttgtgctggcgatcctcgccactctgatggaatggaggaacagcaag
gaggactggttcctctttggcagtgatctgtctaaagtgactgcagagcagttaaacctc
acagtggagatgatgcgtttcctgtcctggctggtgtctcattgtcctacagtcctcggg
ggcagccattgggacttcttgctctgcgctatgttagcctggttggaggcttcaagtgaa
aatgtgagcagtctctggaacccatgggtgcagctgtttgtgtgtgagaacgctgcactg
atagtgacgctgaaccacttcttcacatcatcaccaccagaggttctggagcagctgccg
gctgaactggctggtgaatggagagatttctttgtagaaggaatctacaacctgctgcta
cctctgcctatcagtatcacagatactttcagtgaaccagacgaccctgtgtttcctttg
gctgtgctgcagtcagctggtaaaactctgacatttgtacctgtgcagcagttagtgcag
aactcactgccaccaaagttcatagcagatcagaagacaaacctgccagagccacttcag
acactcctcaacaccttctgtcctcttctgctgtttaaagccaggcctctgcagatcact
gtgtaccacctgttagaaaaggtgatgcctcagctgcctgagtgtgatggagaaggcgac
actaacaagtctgatgatgacagagatgagccgtgtctctctcctccggcgtctctgatg
gccatcctgtcgacctgtgaggagctgtgtgataacatcctggctggggttcaagtggga
gagtttgcagtggttcagccgctcagtgttgagtattcctgcatcctcggatacttactg
gcctggaagcttctcctcacttttttcaaatcctcgccctctcatctgcgtgcccattat
gcccagtatctcaagaggagctgctcccttaacaagctcctcctccacctcttcaaattg
atgcctgagaaccccaactacccgggccagggtgcagagaccaaagagtcaagaaccttc
tttacagagagcctgtctctcaccgtagaccagagcaagagcgttgagtgggagctccca
cacctggcctgcagcgtgtactacagcacggtgcaggacctgcccgccatggtgcgcctg
tggtggaacagccaggagaagagagtgagcgctgctgtggagaagttcacaactaaatat
gtcagtccagttctatcagggcaggagatttcatctgtccacggcagcactcagatgttt
gaaaatatgacagtgaaagcccgctcagcagcgcgggaggtaattgctacctactctgtg
gacgatatcttcatcgagttggtgattcagctgccacagaaccaccctctgggctccatc
actgttgagagtgggcggcgtgttggcgttgccgttcagcagtggaggaactggatgttg
cagctgagcacttacctcacacatcagaacggcactataatggagggtctggctctgtgg
aagaataacgtggataagcgcttcgagggaatagaggattgtatgatctgcttctctgtt
atccacggctccaactactctctgcccaaaaaagcgtgccgcacctgcaaaaagaaattc
cactcagcttgtctgtacaagtggttcacctccagcaacaagtcgacctgtccactgtgc
agagaaaccttcttctaa
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