Cheilinus undulatus (humphead wrasse): 121519040
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Entry
121519040 CDS
T07473
Symbol
hmgb1a
Name
(RefSeq) high mobility group protein B1a
KO
K10802
high mobility group protein B1
Organism
cud
Cheilinus undulatus (humphead wrasse)
Pathway
cud03410
Base excision repair
cud04140
Autophagy - animal
cud04217
Necroptosis
Brite
KEGG Orthology (KO) [BR:
cud00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
121519040 (hmgb1a)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
121519040 (hmgb1a)
09143 Cell growth and death
04217 Necroptosis
121519040 (hmgb1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cud03036
]
121519040 (hmgb1a)
03400 DNA repair and recombination proteins [BR:
cud03400
]
121519040 (hmgb1a)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cud04147
]
121519040 (hmgb1a)
Chromosome and associated proteins [BR:
cud03036
]
Eukaryotic type
Nucleosome assembly factors
HMG (high mobility group) proteins
121519040 (hmgb1a)
DNA repair and recombination proteins [BR:
cud03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
121519040 (hmgb1a)
MMR (mismatch excision repair)
Other MMR factors
121519040 (hmgb1a)
Exosome [BR:
cud04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
121519040 (hmgb1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
HMG_box_5
Motif
Other DBs
NCBI-GeneID:
121519040
NCBI-ProteinID:
XP_041657751
LinkDB
All DBs
Position
12:complement(29730920..29734882)
Genome browser
AA seq
206 aa
AA seq
DB search
MGKDPTKPRGKMSSYAYFVQTCREEHKKKHPEASVNFAEFSKKCSERWKTMSAKEKGKFE
DLAKQDKARYEREMMNYVPVKGGKKKKFKDPNAPKRPPSAFFIFCSEFRPKVKGESPGLS
IGDVAKKLGEMWNSTSSEDKQPYEKKAAKLKEKYEKDVAAYRAKGKTGGAAPAKAPAKME
KRDDDDDDDEEDEEDEEDEEDDDDDE
NT seq
621 nt
NT seq
+upstream
nt +downstream
nt
atggggaaagatccgaccaagccaaggggcaagatgtcctcttatgcatattttgttcag
acctgtcgtgaggagcacaagaagaaacaccctgaggcttctgtgaactttgctgagttc
tccaagaagtgctctgagcgatggaagacgatgtctgccaaggagaagggcaagtttgag
gatttggccaagcaggataaggcccgctatgagagagagatgatgaactacgtccctgtc
aagggaggcaagaagaagaagttcaaggaccccaatgcacccaagagacccccatctgca
ttcttcatcttctgctcagaattccgccctaaggtgaaaggtgagagccccggtttgtcc
attggagatgttgccaagaagctgggcgagatgtggaacagcacctcttcagaggacaag
cagccctacgagaagaaggccgctaaactgaaggagaagtacgagaaggatgtggcagcc
tatcgtgccaagggtaaaaccggtggtgctgcaccagcgaaagccccagccaagatggag
aagagagatgatgatgatgacgatgatgaggaagacgaggaggatgaggaagacgaggag
gatgatgatgatgatgagtaa
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