KEGG   Cheilinus undulatus (humphead wrasse): 121519040
Entry
121519040         CDS       T07473                                 
Symbol
hmgb1a
Name
(RefSeq) high mobility group protein B1a
  KO
K10802  high mobility group protein B1
Organism
cud  Cheilinus undulatus (humphead wrasse)
Pathway
cud03410  Base excision repair
cud04140  Autophagy - animal
cud04217  Necroptosis
Brite
KEGG Orthology (KO) [BR:cud00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    121519040 (hmgb1a)
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    121519040 (hmgb1a)
  09143 Cell growth and death
   04217 Necroptosis
    121519040 (hmgb1a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cud03036]
    121519040 (hmgb1a)
   03400 DNA repair and recombination proteins [BR:cud03400]
    121519040 (hmgb1a)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cud04147]
    121519040 (hmgb1a)
Chromosome and associated proteins [BR:cud03036]
 Eukaryotic type
  Nucleosome assembly factors
   HMG (high mobility group) proteins
    121519040 (hmgb1a)
DNA repair and recombination proteins [BR:cud03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     121519040 (hmgb1a)
   MMR (mismatch excision repair)
    Other MMR factors
     121519040 (hmgb1a)
Exosome [BR:cud04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   121519040 (hmgb1a)
SSDB
Motif
Pfam: HMG_box HMG_box_2 HMG_WDHD1 HMG_box_5
Other DBs
NCBI-GeneID: 121519040
NCBI-ProteinID: XP_041657751
LinkDB
Position
12:complement(29730920..29734882)
AA seq 206 aa
MGKDPTKPRGKMSSYAYFVQTCREEHKKKHPEASVNFAEFSKKCSERWKTMSAKEKGKFE
DLAKQDKARYEREMMNYVPVKGGKKKKFKDPNAPKRPPSAFFIFCSEFRPKVKGESPGLS
IGDVAKKLGEMWNSTSSEDKQPYEKKAAKLKEKYEKDVAAYRAKGKTGGAAPAKAPAKME
KRDDDDDDDEEDEEDEEDEEDDDDDE
NT seq 621 nt   +upstreamnt  +downstreamnt
atggggaaagatccgaccaagccaaggggcaagatgtcctcttatgcatattttgttcag
acctgtcgtgaggagcacaagaagaaacaccctgaggcttctgtgaactttgctgagttc
tccaagaagtgctctgagcgatggaagacgatgtctgccaaggagaagggcaagtttgag
gatttggccaagcaggataaggcccgctatgagagagagatgatgaactacgtccctgtc
aagggaggcaagaagaagaagttcaaggaccccaatgcacccaagagacccccatctgca
ttcttcatcttctgctcagaattccgccctaaggtgaaaggtgagagccccggtttgtcc
attggagatgttgccaagaagctgggcgagatgtggaacagcacctcttcagaggacaag
cagccctacgagaagaaggccgctaaactgaaggagaagtacgagaaggatgtggcagcc
tatcgtgccaagggtaaaaccggtggtgctgcaccagcgaaagccccagccaagatggag
aagagagatgatgatgatgacgatgatgaggaagacgaggaggatgaggaagacgaggag
gatgatgatgatgatgagtaa

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