Cheilinus undulatus (humphead wrasse): 121519117
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Entry
121519117 CDS
T07473
Symbol
nup98
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96 isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
cud
Cheilinus undulatus (humphead wrasse)
Pathway
cud03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cud00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
121519117 (nup98)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cud03019
]
121519117 (nup98)
03036 Chromosome and associated proteins [BR:
cud03036
]
121519117 (nup98)
Messenger RNA biogenesis [BR:
cud03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
121519117 (nup98)
Chromosome and associated proteins [BR:
cud03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
121519117 (nup98)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
121519117
NCBI-ProteinID:
XP_041657843
LinkDB
All DBs
Position
12:complement(50146135..50183210)
Genome browser
AA seq
1839 aa
AA seq
DB search
MFNKSFGTPFGGGTGGFGTSSTFGQQNTGFGATGGFGASAFGTTSNAGGLFSATQNKPGG
LFGSSTFNQPATSSTSTGFGFGAASGTSTNLFGSTATGTTSGLFSQQNNAFGANKPTTFG
NFGTSTSTGGLFGSTNTTANPFGGTTSLFGGSGFSATQQPGTTVKFNPPTGSDTMVKAGV
TTNINTKHQCITAMKEYENKSLEELRLEDYQAGRKGPTNPMAAGTGSLFGAATATSSATT
GLFGSSAPNTSFSFGQNKSTFGATAAGGFGTTAGGLFSQPAQQPAGSLFKPFGQATTTQS
TGFSFGNTNTMGQANTSSMGLFGNTAASQSGGLFGAAQTSTATGFGTGTGLFGQTNPGFG
NVGTQPSLFGNKTAGFGTTTTSAPSFGTGTGLFGNKPALTLGTGTNTSTFGFGANPAAGS
LFGNKPATGGLGTGLGTSFGTAVGTGQTSLFGNNQNKLGTTLGTMGTFGATGFNSGTSTL
GFGAPQQPVALTDPNAAAAQQAMLQQQLSVLAYSPYGDSPLFRNQLSDPKKKEERLKPTN
PTAQKALTTPTHYKLTPRPATRVRPKALTSSGASKTQLFDGLDDDEPSLTNGAFIPRKSI
KKLVLKNLNSSQYNSPINKETDDLASPPEYPQNGHSHMEEEEEELREEPGPSSRADDDPE
VTQFYVNPIAKPIPQGRVQTSLQDTISDLNMHKASRNGLELSSEDVSASLGEESLQEERE
EEPQESQQSPHPAGIVLSRVGYYTIPSMDDLCEMVDENGECVVENFTVGRKGYGSVFFPG
EVNVTGLNLDEIVHFRRKEVIVYPDDKNKPPEGEGLNRRAEVTLDGVWPNDKTTCMQIRS
PERLTDMNYEGRLEKASRKQGAKFLEYRPETGSWVFEVSHFSKYGLQDSDEEDDVPLKTD
PKKLKTMPLPPSKVQQQPPPSQQQVAPQAQSTVVLDPPSSVAELDSDMADITQSFPTESM
LGGEEESEPPLSEMETTGGKLAGLIAAEHEGISASGHIASSLGINPHTLQIMKASLFADD
EEDGDMLQDHVAMKVSDVSSPRIIHPGTQSRPSVGGLLQTRFTSGLFSQLSDSSPRHPLF
PPPLSRGSPATVEPSRSLQWAGPGPSSFLLPPRASEPAIRTVGVRRLGGPVPLKESVTEG
KGRLLMDAGLFAGRSFRVGWGPGWTLAHCGHQLSSPPNKQLDQELTAKTDFSFLPKPAKS
KPLVESPYKVLLEQIIGLEPPSVRISDEEEDEESQAVLQRPLEICLKHSTVDTTDASACP
LIQPQAGVAALHEYAEWINEVNDQKGDTDPVLGYWSEVWTLCEALWGRLGPADQETDMET
PGEYEQQLERRRSFSAWLARGASCRVEEEVAQAKKGYHTDAIFSYLTGNRISEACRLAQK
EGDHRLSLLLSQAVGSQYTRNLLAMQLADWNRMQTDSYLPEERLRIFTLLAGKPVWQSSD
SVVNVCSGLDWKRCVAVHLWFMLSPTASVADALAKYEAAFQGSCEGGKYACAPLPPYMEA
DQLDMEDEEEESKRPLHDLCFHLLKLYSDRHYSLQQLLDPLTVTWERLDYRLSWHLWGVL
QALHYSHLSASRQGLLHASYAAQLESAGLWHMAIFILLHIPDHTQRERAVREMLTLHCPL
QDTDESVQRERFLTERLLIPEQWIHEAKATRARCDSNRHLEALHLYRAGYWSQCHRLLIQ
HLASDCIINDNHDYLLEFLEGLAVPEHSATIQDWDTAGRVYLDYIRVIKTLQDIQQMENA
GYELERLYTDVTSLCSRIELLPCSSARDRLAQSEMAKRVANILRVVLSLQQGDAASDSLS
IPLTQLAPHITRLPMPEDYTLEELRGLTQSYLRQLIVSQ
NT seq
5520 nt
NT seq
+upstream
nt +downstream
nt
atgttcaacaagtcgtttggtactccctttggtggagggacgggggggtttggtacctcg
tcaaccttcggtcagcaaaacacaggttttggggcaacaggaggctttggggcatctgca
tttgggacaacgagcaacgccggaggactgttcagtgccacacagaataaacctggcggt
ctgtttgggtcgagcaccttcaaccagccagcgacttcctccaccagcactggctttggt
tttggtgcagcgagcggaacctccacaaatttgtttggcagcactgcgacgggcaccacc
agcggactcttctcccagcagaacaatgccttcggtgccaacaaacccaccacctttggg
aacttcgggacgagcaccagcaccggcgggctgtttggctccaccaacaccaccgccaac
ccttttggtggcaccacctccctgttcggaggttcgggcttctccgccacacagcagcca
ggaaccacggtcaaattcaatcctccaacaggaagtgacacgatggtgaaagcaggtgtg
accacgaacatcaacaccaagcaccagtgcatcaccgccatgaaggagtatgagaacaaa
tctctggaggagttgaggctcgaggactaccaggcgggcaggaagggtccgaccaacccg
atggcggcggggacaggcagcttgttcggagcggcaacggctacgtccagtgccaccacc
ggtctgttcggctcctccgcccccaacaccagcttctccttcggacagaacaagagcact
tttggagcaactgctgccggcggttttggtacaacagccggcggtctgttcagccagcct
gcgcagcagccggccggcagcctcttcaagccgtttggacaggcgaccaccacacagagt
acgggcttctccttcgggaatactaacaccatgggacaggccaacaccagcagcatgggt
ttgtttgggaacacggcagcgtctcagtctggtggattgttcggcgctgctcagacgagt
acggccaccggctttgggacgggcaccgggctgtttggacaaaccaaccctggatttgga
aacgttggcactcagccgagtcttttcggtaataagacagcggggttcggcaccaccacc
accagtgctccgtcgttcggcaccggcactgggctgtttggaaacaaaccggcactcacg
ctggggacaggaaccaacacgtccacctttggatttggtgcaaaccccgctgcagggagt
ctgtttggtaacaaaccagcgacaggaggactgggaaccggactgggaaccagctttgga
acagcagtgggtacaggtcagacgtctctgtttgggaataaccagaacaaactgggcacc
acgctgggaaccatgggaacattcggagcaactggattcaatagtggaacgagcacgctt
gggtttggagctccacagcagcctgtcgctctgactgatccaaatgcagcagcagcacag
caggccatgctccagcagcagctcagtgtcctcgcctactcaccgtatggagactctccg
ctgttcagaaaccagctgtcagacccaaagaagaaggaggagcgcctgaaaccaactaat
ccaacagcccagaaggctctgaccacgcccactcactacaagcttacacctcgccctgcc
accagagttcgccccaaagcgctgacatcatcaggagcctctaagacgcagctcttcgac
ggcctggacgatgacgaaccctcgctcaccaacggagccttcatacccaggaagagcatc
aagaagctggtgctgaagaacctgaacagcagtcagtacaacagcccaatcaacaaagag
acagacgacctcgcttcaccgccagagtatccacagaacggacacagtcacatggaggag
gaagaggaggagctgagggaggaaccagggcccagcagccgagctgacgacgaccccgag
gtcacacagttctacgtcaaccccatcgccaagccgatccctcagggccgtgtccagacc
agcctgcaggacaccatcagcgacctcaacatgcacaaagcatccaggaacggactggag
ctgagcagcgaggatgtgtcggcgtctctgggagaagagtctctgcaggaggagagagag
gaggagccgcaggagtcccaacagtctcctcaccctgcaggcatcgttctgagccgtgtt
ggctactacaccatcccctctatggacgatctgtgtgagatggtggacgagaacggagag
tgcgtggtggagaacttcactgttggcaggaaaggctacggctcagtcttcttccccggc
gaggtgaacgtgacgggactgaacctggacgagatcgtccacttcagacgcaaagaggtc
atcgtttaccctgatgacaaaaacaagccgccagagggggagggccttaacaggcgggca
gaggtgactctcgatggcgtttggccaaatgacaagacgacctgcatgcagatacggagc
ccggagcgtctgactgacatgaactacgagggtcgtctggagaaagcttcacgcaagcaa
ggcgccaaattcctcgagtacagacctgagacgggatcctgggtgtttgaggtgagccat
ttctccaaatatggcctccaggactccgacgaggaagacgacgtcccgcttaaaaccgac
cccaagaagctgaagacgatgccccttcctccctccaaagtgcagcagcagccccctccc
tcccagcagcaggtggcgccgcaggctcagtccaccgtcgtcctggatcccccgagcagt
gttgctgaactggacagcgacatggcggacatcacccagagctttccgacagagagcatg
ctgggaggagaagaggagagcgagccacctctatcggagatggagacgacgggcgggaag
ctcgcaggtttgatcgccgcggagcatgaaggcatctctgcatccggtcacatcgcgtcc
tcgctgggcatcaaccctcacacgctgcagatcatgaaggcgtctctttttgctgacgat
gaggaggatggagacatgcttcaggatcacgtggccatgaaagtctctgatgtctcatcc
cctcgcatcatccatccaggaactcagagcagaccctcggttggcggcctccttcagact
cgcttcacctccggtctcttctctcagctgtcagactcctccccccgccatcctcttttc
cctccccctttgtctcgggggtctcctgcaacagtcgaaccctcacggtcgctgcagtgg
gcggggcctggcccctcatccttcctgctgcccccccgggcttctgagccggcgatcagg
acggttggcgtgcgacgtctaggcggtccagtgcccctgaaagagtcggtcaccgagggg
aagggccgtctgctgatggatgccgggctgtttgctggcagatccttcagggtggggtgg
ggtcctggctggacgctggctcactgcggccatcagctgagctcaccaccaaacaaacaa
ctcgaccaagaactgacggccaaaacagacttcagcttcctacccaaaccggccaagagc
aaacctctcgtagaaagtccctacaaggttctgttggagcagatcatcggcctggagcct
ccttcagtgaggatcagtgatgaagaggaggatgaagagagccaggcggtgctgcagcgc
cccctggagatctgtctgaagcacagcactgtcgacaccactgatgcctctgcctgcccg
ctgatccaaccacaggccggcgtggcggcgctgcacgagtacgctgagtggatcaacgag
gtgaacgaccagaagggagacacagacccagtgctggggtactggtcggaggtctggacg
ctctgcgaggccctgtggggtcgtttgggtcctgcagatcaagaaacggatatggagacg
cccggcgagtatgagcagcagctggagaggaggcggagcttctccgcctggctcgcccgc
ggcgcttcctgcagagtggaggaggaggtggctcaggcgaaaaagggctaccacacggac
gccatcttcagctacctgacgggaaaccgcatcagtgaggcgtgtcgactcgctcagaag
gaaggagaccaccgtctgtccctgctgctgtcccaggccgttggttcccagtacacccgg
aaccttctcgccatgcagctggccgactggaaccgcatgcagacagacagctacctacct
gaggagagactccgcatcttcacgctgctcgccgggaaacctgtgtggcagtcgtcagac
tccgtagtaaacgtgtgctcaggtctggactggaagcgctgcgtggccgtccacctctgg
ttcatgctgtcgccgacagcttcagtggcagacgcccttgccaagtacgaagccgccttc
cagggctcatgtgaaggtggaaagtatgcctgcgccccactgcctccgtacatggaggcg
gatcagctggacatggaggatgaagaggaggagtctaaacggccgcttcacgacctctgc
ttccacctgctcaaactctacagtgacagacactacagcctgcagcagctgttggaccct
ctgaccgtcacctgggagcgtctggattaccgtctgagctggcacctttggggcgtcctg
caggcgcttcattacagccacctgagcgcctcacggcagggactcctccacgccagctac
gccgctcagctggagagcgccggactgtggcacatggccatcttcatcctgctgcacatc
ccggaccacactcagcgggagcgagccgtgcgggagatgctgaccctccactgccccctg
caggacacggacgagtcagtgcagagggagcgcttcctgactgagaggcttctgatcccg
gagcagtggatccacgaggccaaggccacccgggcacgctgcgactccaacagacacctg
gaggctctgcacctttaccgcgccggatactggagccagtgtcatcgcctgctgatccaa
catctggcctcagactgcatcataaatgataaccacgactacctgctggagtttctggag
gggctggcagtccctgaacacagcgccaccatccaggactgggacacggcaggaagagtc
tacctggactacatccgagtcatcaagactctgcaggacatccagcagatggaaaacgcc
ggttatgagctggagcgtctctacactgacgtgacgtctctgtgcagcaggatcgagctg
ctgccctgcagcagtgccagagacagactcgcccaatcagaaatggcgaagcgtgtggcg
aacatcctgcgcgtagtgctgagtctgcagcagggcgacgctgcgtccgactccctcagc
atccccctcacccagctggccccgcacatcacccgcctgccaatgcccgaggactacacg
ctggaggagctgcgaggcctcacgcagtcctacctgagacagctcatcgtcagccaatga
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integrated database retrieval system
