Cheilinus undulatus (humphead wrasse): 121519118
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Entry
121519118 CDS
T07473
Symbol
arhgef12a
Name
(RefSeq) rho guanine nucleotide exchange factor 12 isoform X1
KO
K07532
Rho guanine nucleotide exchange factor 12
Organism
cud
Cheilinus undulatus (humphead wrasse)
Pathway
cud04270
Vascular smooth muscle contraction
cud04625
C-type lectin receptor signaling pathway
cud04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
cud00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
121519118 (arhgef12a)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
121519118 (arhgef12a)
09153 Circulatory system
04270 Vascular smooth muscle contraction
121519118 (arhgef12a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cud04131
]
121519118 (arhgef12a)
Membrane trafficking [BR:
cud04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
121519118 (arhgef12a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RGS-like
PH_16
RhoGEF
PDZ
PDZ_6
PDZ_2
SOS1_NGEF_PH
Pept_S41_N_bact
HAT_PRP39_N
Motif
Other DBs
NCBI-GeneID:
121519118
NCBI-ProteinID:
XP_041657847
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All DBs
Position
2:31008280..31069050
Genome browser
AA seq
1433 aa
AA seq
DB search
MSDTQSSFTDRFPKKANRTSSILSKDHPPDKKPKSDKSSLPSNEFDPTEALVVQKSGSSS
VLAEGKPESCGLVQRCVIIQKDENGFGLTVSGDNPVFVQLVKEDGAAMRAGVQTGDRIIK
VNGTLVTHSNHIEVVKLIKSGSYVALTVLGRPPGLPQIPLSEAESEMLGVSISSPNSPAT
ERPYSPLDRFSSAHTSWDENSSVCNQKVDVLQKMLSREQQELQAMKEEYSRNPSPRLLKD
IQEAKKHIPQLQGQLLKATGASQEAVPGGDADDGSMFELEHTPASKGDNSTDLSWSSTPI
SRGFGPGSPDNFCPSPKSTPRNSLNSCHSPEAEDATDLDSLSPTTVSSPSSSRLVSQIIG
AEDDYFDSDQEQTNGQCNIFNSIDQLKSRPAHLAAFLHHVISQFDPAPVLCYLYADLYKQ
TNSKETRRVFMDLHTFFIDRGANLKVVVPESISADLDRRRTELIPEEINRQHVQTLQDSL
LPDIQRNLEDFRQKRSMGLTVAEVELARLDQERVRDRVTLERERSYAENIITKIEDILLT
TQTTEEEKCTTMQYVIYTYMKHLGVRVKEPRSLESKRVRINFLPKIKKSIKTEKEGEEKV
KKPRFPSILGPQRRPSRIEAAPVGKALDSRPRPQKQLSQPSLGASDHTEGGRLRGSQSSE
GSELTHSTSVNTSSPGSATFSSDTSRDTEMGGTPTSAPSRLSDGLQSDPLDGLPYPASHF
DLYSLDQLQEDDRESDRAHEGTPKALRRLEGLGAADVQSEDDQGTDSEHDPPNWQQLVGR
EVLAGLRPQEIKRQEVINELFYTERAHVRMLRVLDHVFYQKLSKEAILPPVDIKNIFTNL
DEILQLHVSILEQMAAVRKRNESSVIDQIGDDLLSWFGGGEEEKIKQAVGTFCSNQPFAL
EIIKTKQKKDSRFTSFIQEAESNRLCRRLQLKDIIPVEMQRLTKYPLLLDNIAKYTDSAV
EKDKVKQAAECCRKILNHVNQAVKESEDKQRLEDYQRRLDLSSLKQTDNPMILELKNLDL
TKRTMVHEGPLSWKVNKDKTIELYTLLLEDILVLLQKQDERLILKCHSKNLAGTADTKHI
FSPIIKLNTVLVRSVATDNKSFFVLSMSENGAQIYELMAPTVSDQITWQRLITQRADAMK
VKPHNVIPLPQTDGERDGVEIITAGVSRLSRDPDRTSTGSTQSTDKESSPASRNELQSCL
PGSNPFEGGKAEEEEGFVDPEIPYQVAEDGKEGDSFNMFPSRADEALKTLAALKQVLVTQ
LMSQEAVEQTKRSTGARLLRTTSLRTPVDSRARVMVHNGSDKNSPQTEDRTQDLGSGDTG
FFDSPEDYAGYLVLEGYGGPGETSTDDDILASTTGKQLRSSQGCATDSGINLRFSSTSQA
GSLSSFSRQVLSHLRNLQANLNYLKEVEVKYNNLIRQRPEKAAADTDGSKDKR
NT seq
4302 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacacacagtccagcttcactgacaggtttcccaagaaagcaaatagaaccagc
agcattctcagtaaagaccaccccccagacaagaaacccaaaagtgacaaaagctcactt
ccctccaatgagttcgaccctacagaagctctggtggtgcagaagagtggcagcagcagt
gtgctagcagaggggaagcctgagtcctgtggtctggttcagcgatgtgtaatcatccag
aaagatgaaaatggctttgggctcactgtcagcggggacaacccagtgtttgtgcagctt
gtcaaggaagatggggcagctatgcgggcaggtgttcagacaggagacaggatcatcaag
gttaatgggacccttgttacacattctaatcacattgaggtggtgaagctcatcaaatcg
ggctcctatgtggccctcacagtgttggggcgccccccagggctcccccagattcccttg
tcagaagcagagtctgaaatgttgggcgttagcatttcctcgccaaactcaccagcaaca
gaacgcccctacagtcctctggaccgcttctcctctgctcacacatcatgggacgagaac
agcagtgtctgcaaccagaaggttgacgtgctacaaaagatgctctcaagagaacaacag
gagcttcaggccatgaaggaggagtacagcaggaacccctcccccagactactgaaagat
atccaggaagctaaaaaacacattcctcagctgcagggtcagctcttaaaggccactggg
gcatcacaggaggctgttccaggaggcgacgcagatgatggtagcatgtttgaattagag
cacacccctgcctccaagggagacaacagtacagacctgtcctggagcagcactcctata
tctcggggatttgggcctggatctccagacaacttctgcccaagcccaaagagcactccc
agaaacagtttaaactcctgccactctccagaggcggaggatgccactgacctggactct
ctgtcccctaccacagttagcagcccctcttcttcccgtctcgtctcacaaatcattgga
gctgaagatgactattttgattcggaccaggagcagacaaacggccagtgtaacattttt
aacagcattgatcagctcaagtctcgacccgcccaccttgcagccttccttcaccatgtc
atctctcagtttgaccctgctcctgtgctgtgctacctctatgctgacctctacaagcag
accaactccaaagagaccagacgggtcttcatggacctccacacgtttttcatcgaccgg
ggagcaaatttaaaagttgtcgttcctgaatccatatctgctgatcttgatcgaaggcgg
acagaactgatcccggaggaaataaacagacaacatgttcaaacgttgcaggactcactg
cttcctgatattcagaggaacctagaggatttcaggcaaaagcgcagtatgggcctaacg
gtggctgaagtagagttggccagacttgaccaagagagagtcagagatcgtgtcactctg
gaacgagagcgctcttatgctgaaaacatcatcaccaaaatagaggatatcctgttaact
actcagacaacagaagaagagaaatgcactacaatgcagtatgtcatctatacatacatg
aagcaccttggcgtgagggtaaaggagcctcgcagtctagaatccaaacgggtcaggatc
aacttcctccccaaaatcaagaaaagcatcaagactgaaaaagaaggagaggagaaggtg
aagaaacccagatttcccagcatcctaggaccgcagcgtcgacccagccgcattgaggca
gcaccagtgggtaaagccttggacagtcggcccaggcctcagaaacagttgtctcagccc
tcgctgggtgctagcgaccacacagaaggtggccgtctacgaggcagccaatcaagcgag
ggctctgaactcacacactccacgtccgtcaacacctcatcccctggcagcgccaccttt
agctctgacaccagcagagatactgaaatgggtggaactccaacctcagccccttccagg
ctgagtgacggtcttcaatctgaccctcttgatgggttaccataccctgcatcgcacttt
gatctttacagcctggaccaactgcaagaggatgacagagaaagtgacagagcccatgag
ggaacaccaaaggccttaagaaggcttgagggactgggagctgctgatgtccagagtgag
gatgaccagggaacagactccgagcatgaccctccaaactggcagcagctggtggggaga
gaggtcctggcgggtctcaggcctcaggaaatcaagagacaggaagtcattaatgagctg
ttttacactgagcgagcacatgtgcggatgctgagagttttggaccacgttttctaccaa
aagctatccaaggaagccattctgcctcctgttgacatcaagaacatctttaccaacctg
gacgagattctacagctgcatgtttcaatactggagcaaatggcagctgttcggaagagg
aatgagtcttcagtaattgatcagataggagatgacttgctctcctggtttggtggtgga
gaggaggagaagatcaagcaggcagtggggacgttctgtagtaaccagccatttgctctg
gagatcatcaagaccaagcagaagaaggactcgcggtttacttcatttattcaggaggca
gagagtaacagattgtgccgccgactacagcttaaggacatcattcctgtggagatgcag
cgactcaccaagtaccccctgctactcgacaacatcgccaagtacacagatagtgcagtg
gagaaggacaaagtgaagcaggcagcagagtgctgtaggaagatcctcaatcatgttaac
caggcggtgaaggaatctgaggacaagcagaggttggaggactatcagaggagattggac
ctttcctctctaaaacagacagacaaccccatgatcctggagctaaagaacttggatcta
accaagagaacaatggtgcatgaaggtccgctgtcatggaaggttaacaaggacaagact
attgagctttacacactcctcctggaagacatcctagttctgctacagaaacaagatgag
cgtctgatcctcaagtgtcatagtaaaaacctggcaggcacagcagatacaaaacacatc
ttcagcccgatcatcaaactcaacactgtgttggtgcgctctgtggccacagacaacaag
tcgttctttgtcctttccatgtcagaaaatggagctcagatctatgagctgatggcacct
acggtctcagaccagataacgtggcagcgtctaatcacccagagagctgatgctatgaaa
gtcaaacctcacaatgtcataccactacctcagactgatggggagagagacggtgtggaa
atcataacagcaggtgtttccaggctgagcagggaccctgaccgcacatctactggcagc
acccagtccacagataaagagagcagtccagcttccagaaatgagctgcagagttgtcta
ccaggaagtaacccatttgagggaggtaaagcagaggaagaagaaggttttgtggaccca
gagattccataccaagtggctgaagatggaaaagaaggagactcatttaacatgtttccc
tccagagctgatgaagcactaaaaacattggcagccttaaagcaggtgttggtgacccag
ctgatgtcccaggaggcagtagagcaaaccaaacgctccaccggggcccgtctcctcagg
accacctctttgcggactcctgtagacagtcgtgctcgggtgatggttcacaacggttca
gataagaacagcccccagacagaggacaggactcaggatctaggctctggagacacaggc
ttctttgattctcctgaagattatgcaggatatttggtcctggagggatatggtggtcca
ggggagactagcacagatgacgacatcttggcatcaactacagggaagcagctgcgctca
tcacaaggctgtgccaccgactctggcatcaacttgaggttctcttcaacatcacaggcc
ggcagcctctcctcttttagcagacaggtcttgtctcacctcagaaaccttcaagccaac
ctcaactatctaaaggaggtggaggttaagtacaataatctaatacgccaaaggccagag
aaggcagcagcagacacagatggaagtaaagacaagagatag
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integrated database retrieval system
