Cheilinus undulatus (humphead wrasse): 121519923
Help
Entry
121519923 CDS
T07473
Symbol
rb1cc1
Name
(RefSeq) RB1-inducible coiled-coil protein 1
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
cud
Cheilinus undulatus (humphead wrasse)
Pathway
cud04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
cud00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
121519923 (rb1cc1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cud01009
]
121519923 (rb1cc1)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cud04131
]
121519923 (rb1cc1)
03029 Mitochondrial biogenesis [BR:
cud03029
]
121519923 (rb1cc1)
Protein phosphatases and associated proteins [BR:
cud01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
121519923 (rb1cc1)
Membrane trafficking [BR:
cud04131
]
Autophagy
Autophagosome formation proteins
ULK complex
121519923 (rb1cc1)
Mitochondrial biogenesis [BR:
cud03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
121519923 (rb1cc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG11
ATG17_like
TBK1_ULD
TMF_DNA_bd
ubiquitin
Motif
Other DBs
NCBI-GeneID:
121519923
NCBI-ProteinID:
XP_041658971
LinkDB
All DBs
Position
13:complement(23871483..23895252)
Genome browser
AA seq
1627 aa
AA seq
DB search
MKLYVFQVNNGSTLTFDTDLAVQTVLELKHAIQAKYKIAIQHQVLVVNGGECMAAERRVC
SYSAGTETNPIFLFNKEMILCDRDPTIPKTTFSIESEIQVKVEESLLMPAVFHTVASRTQ
LALEMFEVANKLSSFCERLVHDEHLQHQGWAAIMANLDDCTLSYQKLLVKFETSYTNYQH
DLEEIKLKLTKLGTAVAVMARIPLLECLTRHSYKESMEKSSSTPGKDSDETEEEKSTDSV
LCTANTQKPSKLSASLSASGTPTCEQTGDQETNEMTDSGGLRAALLDDDTPELANPSTFN
VTLLDWINVQDRPNDVESVVRKCFDSINRLDPRIIQPFLADCRDTISKLDNQNMKAIKGL
EDRLYALDQMIASCKKLVNEQKELAQGFLANQKRAENLKDTSVLPDLCLSHTNQLMIMLN
NHRKLLDIKKKCTTAKQELANNLQVRLKWCCYVMLHADQDGEKLQALLRLLTELIERVRV
VEALSTVPQMYCLAVVEVVRRKMFMRHYREWAYALVKDGKLLYEAEKFKRESFGKLFRKS
FLRNRLFRGLDSWPPTSFCTRKPRRFDDELPDISVEDLQYLKSCCPVEVQPFLMVPTMCD
FEPLNRHVETLQQLVQAAQSIDEMSQTITDLLTEQRLSCSQSAQRSTVLTPQSESIPGTS
TQMSSKTPSSLSLQGPSCQPINVPVPAPLEDLSPDSIDAQTFDFETIGHPNMDPVMQQGS
LDLDSLAESPESDFMSAVNEFVIEENLTSPNPISDPTSPEMMVESLYSSVINAIDNKRMQ
DTTILERENSRIAVLKQVVDKYRSAAEESHSNLRSVKDDLCHLRVLVLKEQHDFGFVLRS
MSTDVRNIVDKIVLTQEVELKEKHQNELLALQQELEKQVQTLTEENQVNQNIVRDVQRAM
LELEGLMERKEKELTQLEHEKERWAETENKQTDRIKELDQMISDQANEIKTLSACKDSLT
SQLENLHFEIERSQQKIRQELEVAEQLHLKELEYRMKQEHQAELETFTKNNQEALEHLAS
ENSAKLSEAADHHASALREKDNQIKDMEARITELAELRCKLEVELALKESETEEVKLLLE
EAKTQQAETLKSQVESETKVLSEELEDLRKQLQVKNEEYEVDLAELRTLMRIEKDHCISE
LVERHEEETILLRTELSSLQQQVHDAKRNHAEQQQSFKQEFDQHVAALGEEKEKQQRSFQ
ELEQELRTVISNLQAENDLLSNKLEQDRERQAAEKVVKKEEASKVASSNAFRELEQQKEE
MEKRLSEKIRQLENELQERQSFKSDEGLPLHAEGHADAGTPLSLDSALQERLQQERASLQ
SQIELLEKKKNEEIQNLKTSLIAEQQTNFNTVLTREKLKKEQIISELTEKLQKVTQQQEK
DKALIETLSEDRASVMQEKKHLEEELNRLRSTALISSTFFTSNPSSQEGIEAGGAAAAAR
ALPVAGACSCEPMAETDRLASVAAIRDDEHVDSAVEASMVTVHDNVLMSEEKQRILLLER
TLHMKEEENKRLSQRLMSQSMSSVSSRHSDKIAIRDFQVGDLVLIILDERHDNYVLFTVG
PTLYFLHSESLTALDLKPASGTSRRPWVLGKVMEKEYCQAKKAQNRFKVPLGTKFYRVKA
VPWNRKV
NT seq
4884 nt
NT seq
+upstream
nt +downstream
nt
atgaagttgtatgtgttccaggtcaacaatggcagcacattgacttttgacacagatctt
gctgtccaaactgtgctggagctaaaacatgccatccaagccaaatacaagattgcgatt
caacatcaagtccttgttgtcaatggaggggaatgtatggctgcagagaggcgggtctgc
agctacagtgctggcactgaaacgaaccccatatttctgttcaacaaagagatgatcttg
tgtgatcgggatccaacaatccccaaaaccacgttctcgatagagagtgagattcaggtt
aaggtggaggagtctctactgatgccagccgtctttcacactgttgcctcgcggacgcaa
cttgctctggaaatgtttgaagttgccaacaaacttagttctttctgtgaacgtttggtt
catgatgaacaccttcaacatcaaggctgggctgcaattatggcaaatttggacgactgc
actctgtcatatcagaagctgctggtgaaatttgaaacttcatacacaaattatcaacat
gatttggaagaaattaagctgaaacttacaaagctagggacagcagttgctgtaatggcc
aggatacctctgctggagtgtttgacacgacacagttacaaagagagcatggaaaagtcc
agctcaactccaggaaaggattcggatgagacagaagaagaaaagtccactgactctgtg
ctctgcacagctaacacgcagaagccctccaagttatcagcctccctctctgcttctggg
acacccacttgtgagcagactggagaccaggaaacaaatgagatgactgacagtggtggt
ctgagagctgcgctcttagatgatgacactccagagttagccaacccgtccaccttcaat
gtaacactattagactggatcaatgtgcaagacagaccaaacgatgtggagtctgttgtt
aggaagtgctttgactctatcaacaggcttgacccacggatcattcagcccttcttggca
gattgtcgtgacacaatttccaagctagataatcaaaacatgaaagccattaaggggctt
gaggacaggttgtatgctcttgaccaaatgattgcaagctgtaagaagttggtgaatgaa
cagaaagaacttgctcagggatttctggccaatcagaagcgagctgaaaacctgaaggat
acatctgttctgcctgatttatgtctaagtcacacaaaccagctgatgatcatgctgaac
aaccacaggaagctgctagacatcaaaaagaagtgcaccactgccaaacaagaacttgca
aacaacctgcaagtccgactaaaatggtgctgctacgtgatgctccatgcagaccaggat
ggagagaagcttcaggctcttctcagactcctgacagagctgattgaaagagttcgagtg
gttgaggccctgagcacggtgccccagatgtactgtttggcggtggtggaagttgtcaga
agaaaaatgtttatgcgccactacagggagtgggcttatgcacttgtaaaggatgggaaa
ctactgtacgaggcagagaagttcaaaagggaatcctttgggaaactctttagaaagtct
ttcctcagaaatcgtttgtttagaggacttgattcatggcctccaacatctttttgtaca
cgaaagccccggagatttgatgatgaacttccagacatctcagttgaagacctgcagtac
ttgaaatcgtgttgtcctgtagaggtgcagcctttcctcatggtacccacaatgtgtgac
tttgagcccttaaatcgacatgtagagacgctgcagcagctggtccaagctgcacagagt
atagacgagatgtctcaaaccataactgacctgctcaccgaacaaaggttatcctgcagt
cagagcgctcaaagatccactgtgttgaccccacagtctgagagcatacctgggacctca
acacagatgtcctctaagaccccttcctctctcagccttcaaggacccagctgccagccc
atcaatgttcccgtcccagctcctctggaggacttgtctccagacagcatcgatgcacag
acatttgactttgaaacaattggccatccaaacatggacccagtcatgcagcagggctct
ctggacttggattctctggcggagagccctgagtctgacttcatgtctgctgttaatgag
tttgtgattgaagagaacctgacctctccaaaccccatcagtgaccccaccagccctgag
atgatggtagagtctctgtactcttcagtcatcaatgccattgacaacaagcgtatgcag
gacaccacaatactagagagggagaactcacggatcgctgtcctaaaacaagtggttgac
aagtaccgatcagctgcagaggagtcccattcaaacttacggagtgttaaggatgacctc
tgtcacttacgagtcctggtgttaaaagaacaacatgactttggctttgtcctgaggagt
atgagcacagacgtgcgaaacattgtggacaagattgtcttgacgcaggaagtagaatta
aaagaaaagcatcaaaatgaacttcttgctcttcaacaagagctagagaagcaagttcaa
acactaaccgaagaaaaccaagtaaaccagaacattgtcagagatgtccagcgtgcaatg
cttgagctggaggggctgatggagcgcaaagagaaagaactcactcagctggagcatgaa
aaagagcgatgggctgagacagagaataaacagactgaccggatcaaggagctagaccag
atgatcagcgaccaagccaatgagatcaagacactctcagcctgtaaagactctctgacc
agccagcttgaaaatctgcactttgagattgaacgcagccagcagaagatcaggcaggaa
ctggaggttgcggagcagttgcacttaaaggagcttgagtacagaatgaagcaggaacac
caggcagaactggagacttttaccaagaacaaccaggaagctcttgaacatctagcttct
gaaaatagtgcaaagttaagtgaagcagctgatcatcacgcctctgcacttcgggagaaa
gacaaccaaattaaagacatggaggctcgtattacagagcttgcagaactccgctgcaag
ctggaggtggagctagccctgaaagagtcagagacagaggaagtgaagctcttattggag
gaggctaagacacagcaggctgaaacattgaagtcccaggtagagtctgagaccaaagtc
ctcagtgaggagcttgaggaccttagaaaacagcttcaggtgaagaatgaggagtatgaa
gttgacctggctgagctgaggactctcatgcgcattgagaaggaccactgcatctcagag
ttggtggaaagacatgaggaggagactattttattgcgtactgagctttcctccctgcag
cagcaagtccatgacgctaagaggaaccacgctgagcagcaacaaagttttaagcaggag
ttcgaccagcatgtggccgctcttggcgaggaaaaagaaaagcagcagaggagtttccaa
gaactggagcaagagttgaggactgttatcagtaatttgcaggctgaaaatgacttgctc
tcaaacaaactagagcaggacagagagagacaagcagctgagaaagttgtgaagaaagaa
gaggcctctaaggttgcatcatcaaatgcttttagagagttagagcagcagaaagaggag
atggagaagagactgtcagaaaaaattagacaacttgagaatgagcttcaggagagacaa
tctttcaaaagtgatgaagggttgccgctgcatgctgagggccatgcagatgctggaaca
cctctgtcactagactcagcactgcaagagcgtctgcagcaggagagggcctccctgcag
tctcagatagagctcctggagaagaagaagaatgaggagatacagaacctcaagacgtca
ctaatcgcagagcaacagaccaatttcaacactgttctaacccgagagaagctgaaaaag
gaacagattatcagtgagctcactgagaagttgcagaaagtgacccaacagcaggagaag
gacaaagctctcatagagactctctctgaggacagagcaagtgtcatgcaggagaagaaa
cacttggaagaggagcttaaccgcctgcgcagcactgccctgatctcctccaccttcttt
acatctaacccctcgtctcaggagggcatagaagctggaggagcagcagcagcagcgaga
gctctgcctgttgctggggcttgctcctgtgagcccatggctgaaactgacagactggcc
tctgtggcagccattcgggatgacgaacatgttgattcagcggtggaggccagcatggtg
acagtgcatgataatgtcctgatgtcagaggagaaacagcggatactccttcttgagagg
actttacacatgaaggaagaagaaaacaaacgcctcagtcaaagactgatgtctcaaagc
atgtcgtctgtgtcttcacggcattcagacaaaatcgccatcagagatttccaggtaggc
gatttggtcctaatcatcctggatgaaaggcatgacaactacgtgctgttcacagttggt
cccaccctctacttcctccactcagagtctctcactgcactggacctcaaaccagcatca
gggacctcaagacggccgtgggtacttggaaaggtgatggagaaggagtattgccaagca
aaaaaggcccagaacaggttcaaggttcctttaggaaccaagttctacagagtgaaagct
gttccatggaacagaaaagtataa
DBGET
integrated database retrieval system
