KEGG   Cheilinus undulatus (humphead wrasse): 121519975
Entry
121519975         CDS       T07473                                 
Symbol
col6a1
Name
(RefSeq) collagen alpha-1(VI) chain
  KO
K06238  collagen type VI alpha
Organism
cud  Cheilinus undulatus (humphead wrasse)
Pathway
cud04510  Focal adhesion
cud04512  ECM-receptor interaction
cud04518  Integrin signaling
cud04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:cud00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    121519975 (col6a1)
   04518 Integrin signaling
    121519975 (col6a1)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    121519975 (col6a1)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    121519975 (col6a1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cud04147]
    121519975 (col6a1)
   00536 Glycosaminoglycan binding proteins [BR:cud00536]
    121519975 (col6a1)
Exosome [BR:cud04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   121519975 (col6a1)
Glycosaminoglycan binding proteins [BR:cud00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   121519975 (col6a1)
 Hyaluronan
  Extracellular matrix or blood plasma proteins
   121519975 (col6a1)
SSDB
Motif
Pfam: VWA Collagen VWA_2 VWA_3 DUF1194
Other DBs
NCBI-GeneID: 121519975
NCBI-ProteinID: XP_041659054
LinkDB
Position
13:complement(38139695..38184560)
AA seq 1009 aa
METLRGLLALLCVLVAGAQTQSLRARFADCPVDLFFVLDTSESVALRQKPPEFYIGQIKS
FTNRFIDELRDMRHRCDRVLTWNSGALHYSDDVQLVRELRDMNTEREALKKAILDIQFIG
KGTYTDCAIKRGLAELLVGGSHYHENKYIVVVTDGHPITGYKEPCGGVQEAANEAKQHGV
KVFAVAISPDQEDTRLSLIATDQTYRQNFTAADDSRSTHMGTIRTIIDIITNETKDTCCS
FDCNAKGGPVGPPGDPGSKGERGRPGMPGEKGDVGNLGNVGDPGPIGYSGMKGDRGTRGE
KGERGHKGYKGDKGYRGNDGIDGRKGEPGFPGLPGCKGSPGADGLQGEPGPKGDPGSYGL
KGAKGDPGRDGEPGRPGNYGAMGPQGDRGPRGLDGDKGERGDDGTQPTPGLPGERGQIGE
KGEQGSRGNRGPRGEPGEPGNRGDQGREGSAGPNGDPGEPGKPGSPGYRGDEGPLGPEGA
KGPKGIKGAPGDRGPLGERGEDGVPGNGTVGCNGFQGYPGPRGDPGEPGGKGTPGPKGDD
GDPGDPGPDNNEPGLPGLKGAKGHRGPEGRPGPPGPPGPPGTDECEILDIIMKLCSCCEC
KCASLDLAFIVDSSESIGATNFALAKDFIITVVDRLIKDQQVKFAANESKVSVVQYSGSK
AQEVVQLGVTVNSLTDFKQAVKDLRWLAEATYTGEALDFALTNTIKLMQQENRVVLVLTD
GRSDITRDKVPLNVLCGNNIRVGGLGVKDYTGRQPNQEQLEDVVCKSDPKPGFSFVLDNF
AELLDDTFLQNLTEKICQDKKCPDYKCPIKFTGSADVLIMMDSSASVGQKNFETSKTFVK
RLAERFLNAEKERGATVRVGVAQYSRGARMEQALTTNLTLLSNKIEESTFQNDGTNVLEA
MDFAAKNLRSRGDASGGGKKLVLFSDGRSQAITQAVLDKRVQELATAGVEVFVVAVGSQV
NEANLRTLVSRGRLDDITYAQRHLFRVADYPSLLRGVFHQTVSRRVSLP
NT seq 3030 nt   +upstreamnt  +downstreamnt
atggagactctcagaggtctcctcgcgctgctgtgcgttttggtggctggagcgcaaacg
cagagcctaagagccaggtttgcggattgtcccgttgacctcttctttgttctggataca
tcggagagtgtcgccctcagacagaaacctccagagttctacattgggcagatcaaatca
ttcaccaatcggtttattgatgaactccgggacatgcgtcaccgctgtgaccgcgtcctg
acatggaactcaggcgctctgcactacagtgacgacgtccaactggtgcgtgagctgagg
gacatgaacaccgaacgtgaggccctgaagaaggccatcctcgacatccagttcattggc
aagggaacatacaccgactgtgccatcaagaggggtctggctgagctgcttgtcggaggc
tctcactaccatgagaacaaatacatcgtggtggtgactgacggtcatcccatcaccggg
tacaaggagccgtgtggtggtgtgcaggaggccgcaaatgaggccaaacaacatggagtc
aaagtgttcgctgtcgccatctcacctgaccaggaggacaccaggctgtctcttatcgcc
actgatcaaacctacagacagaacttcaccgctgcagacgactccagatccacacatatg
ggaaccatccgaactatcattgatatcatcaccaatgaaacaaaagatacgtgttgctcc
tttgactgcaatgctaaaggagggcctgtaggaccaccaggagatcctggctccaaggga
gaaagaggcagaccagggatgcctggagagaaaggagatgttggtaacttgggcaatgtt
ggagatcccggtcctattggttacagtggaatgaagggagaccgtggaaccagaggagaa
aagggagaaagaggtcacaaaggctataagggagacaaaggttacagaggaaacgacgga
atcgatggacgaaagggtgaacctggtttccctggtctccccggctgtaaaggatcacct
ggagctgatggtctgcagggagagcccggaccaaagggagaccctggttcatatggactg
aaaggagcaaaaggagatcctggaagagatggagaaccaggacggcccggaaactacggc
gccatgggacctcagggagatcgaggccctcgtggtcttgatggggacaaaggagagcgc
ggtgatgatggtacacagcccactccaggacttcccggggagagaggacaaatcggagag
aagggcgagcagggatcccgtggaaacagagggccaagaggagagccgggggagccagga
aaccgaggagatcaggggagggagggctcagccggccccaacggagaccctggcgagcct
ggcaagcccgggtctcctggctacagaggagatgagggcccacttggacctgagggagcc
aaaggaccgaaaggaatcaaaggagctccaggagacagaggcccattaggggagagggga
gaggatggtgtaccaggaaacggcactgtaggatgtaacggtttccagggttatcctggg
ccccggggagaccctggtgagccgggtggaaaaggaacccctggacctaaaggagacgac
ggagatcctggagatcccggccctgataacaatgaacctggacttccaggacttaaagga
gccaaaggtcacagaggacctgagggcagaccgggacctcctgggcctcctggaccacca
ggaactgatgaatgtgaaattctggatatcatcatgaagctctgctcttgttgtgagtgc
aagtgtgcatctctggacctggcgttcatcgtagacagctcagagagtatcggtgccaca
aactttgccctggccaaagattttatcatcacagtggtcgacagactgatcaaagaccag
caggtcaagtttgcagccaatgagtccaaggtgagcgtggtccagtacagtggatccaag
gcacaggaagtcgtccaactgggcgtcaccgtgaattcactcaccgacttcaaacaggca
gtgaaagacctgcgctggctggctgaagccacctacaccggagaggctctcgacttcgct
ctgaccaacacgatcaagctgatgcagcaggagaaccgcgtcgttctcgttctcactgac
ggacgctctgatattaccagagacaaggttcccctcaatgtactctgtggtaacaacatc
cgggtgggcggtttaggagtaaaagactacacaggccgtcagcccaaccaggagcagctt
gaagacgtcgtttgtaagagcgatcctaaaccaggcttttctttcgtcctggacaacttt
gcagaactgctcgacgacactttcctgcagaacctcaccgaaaaaatctgccaagataag
aaatgcccagactacaaatgtcccatcaagttcactggcagtgctgatgttttgataatg
atggacagctcagccagtgtgggccagaagaactttgaaacaagcaagacctttgtcaaa
cgcttggccgagcgtttcctgaatgctgagaaggagcggggtgcgacagtcagggtcggt
gtggctcagtatagccgcggcgcccgcatggagcaggccttgacgaccaacctgactctg
ttgtccaacaaaatcgaggagtccaccttccaaaatgatggcacaaacgtgttagaggcc
atggattttgcagcaaagaatctacgcagccgaggggatgcatccggaggtgggaagaaa
ctggtgctgttctctgacggcaggtcccaggccatcacccaggccgtgttggataagcgt
gttcaagagttggcgaccgcaggcgtagaggtctttgtcgtcgccgtaggcagtcaagtc
aatgaggccaacctgcgcacattggtgagcagggggcgtctggatgacatcacctatgcc
cagcgccacctgttccgtgtcgcagactacccctctctgctccgcggggtcttccaccaa
accgtctcccgcagggtttccttgccctaa

DBGET integrated database retrieval system