Cheilinus undulatus (humphead wrasse): 121520076
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Entry
121520076 CDS
T07473
Symbol
wdr33
Name
(RefSeq) pre-mRNA 3' end processing protein WDR33 isoform X1
KO
K15542
polyadenylation factor subunit 2
Organism
cud
Cheilinus undulatus (humphead wrasse)
Pathway
cud03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cud00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
121520076 (wdr33)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cud03019
]
121520076 (wdr33)
Messenger RNA biogenesis [BR:
cud03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
121520076 (wdr33)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40
Beta-prop_WDR5
Beta-prop_IFT122_1st
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
Beta-prop_EML
Beta-prop_CAF1B_HIR1
WDR55
WD40_Gbeta
EIF3I
Beta-prop_IFT140_1st
Beta-prop_Aladin
Beta-prop_TEP1_2nd
ASA1
Beta-prop_WDR36-Utp21_2nd
ANAPC4_WD40
Beta-prop_WDR19_1st
DSE1_N
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_RIG_2nd
Beta-prop_EIPR1
CFAP251_N
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
eIF2A
Beta-prop_Vps41
WD40_RFWD3
Beta-prop_NOL10_N
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
Beta-prop_WDR35_TULP_N
Beta-prop_HPS5
Beta-prop_WDR11_2nd
Beta-prop_DCAF4
Beta-prop_WDR41
Ge1_WD40
PEP5_VPS11_N
Motif
Other DBs
NCBI-GeneID:
121520076
NCBI-ProteinID:
XP_041659255
LinkDB
All DBs
Position
LG13
Genome browser
AA seq
1083 aa
AA seq
DB search
MATDIGSPQRFFHMPRFQHQAPRQVFYKRPDQQQAMQQLTFDGKRMRKAVNRKTIDYNPS
VIRHLENRLWQRDHRDFRAVQPDAACYNELVPPVGMLNNPMNAVTTKFVRTSTNKVKCPV
FVIRWTPEGRRLVTGASSGEFTLWNGLTFNFETILQAHDSPVRAMTWSHNDMWMLTADHG
GYVKYWQSNMNNVKMFQAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRCHEERILRG
HGADVKCVDWHPTKGLVVSGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEVKWNLNGNW
LLTASRDHLCKLFDIRNLKEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWHTG
VEKEVGGMEMAHEGMIWSLAWHPLGHILCSGSNDHTSKFWTRNRPGDKMRDRYNLNLLPG
MSEDGVEYDDVDLNNVASIPGMGIPEQLKAAMEQEQSSKEAAPEVEMSIPGLDWGMDEVM
GKDTKKVPQKKVPYAKPIPAQFQQAWAENKVPMMPPGGDLSKERKVEQKVDLKKKTQAEL
EQEMAALQYTNPMLLEQMKMDRMNQVNTDGNMGPPQGQGPLPPFPGPGGPGGPMPSNQQG
YNMAPQQMSNNMGPPMGPGGMQPPFMPPGQMGPPSGPQPHQGPPQGMMGPPDMQGPQGMQ
RHPGPPRNMGPQGPHGMGPRGMQGPPGGMMCPPPRGMGPRDPQGPPPQGGMMPPEGNMMG
PQGSMQGGMMGPPPRTHGNNFGMGNMQGPPGGMHGPPGNMQGHHGNMQGPPGNMQGPHGN
MQGPPGNMQGPAYMQHQGQNSGPMMHGMGQQGPNNKGDPRGPPPNHHMGPPDRQGPGDQG
SGPYWGDNQQGWRGAQDFDGVQDFHGREEGWRSGPGQGPGYQGGGGGSHRGGGHRGGGGN
GGNWGPDERFSGGEFRGRRDDRFRGGGPGRPGGRGYSEEYGGQEESYDVQEDMGRGWEGG
GRGRPPRGGGPPRGGGGHDGYRDGQMHDGSSPAGRERSSSLQGMDMASLPPRKRPWQDGP
GTGDPRESPGPDGGRPPQDGGGYGPPGRGGRGSWGPGGPGPGPVLRRGGPTPRGPPRGGG
RGR
NT seq
3252 nt
NT seq
+upstream
nt +downstream
nt
atggcgacagatatcggctcgccacagcggttcttccacatgccgcggttccagcaccag
gcaccgcggcaggtgttctacaagcgtccagaccagcagcaagccatgcagcagctgacc
ttcgacgggaaacgcatgaggaaggccgtgaaccgcaaaaccatcgactacaacccttca
gtaatcagacacctggagaatcgactgtggcagagagatcaccgagacttcagagccgtg
cagccagacgctgcatgctacaacgagctggttcctcccgtcggcatgctgaacaacccg
atgaacgccgtcaccacaaagtttgtccgaacctccaccaacaaagtcaagtgtcccgta
tttgtgatcaggtggactcctgaaggccgccgtctggtcaccggggcatccagtggagag
ttcactttgtggaacgggctcaccttcaactttgagaccatcctacaggcccatgacagt
cctgtaagggcaatgacctggtctcataatgacatgtggatgttgacggcggaccatggc
ggctatgtgaagtactggcagtccaacatgaacaacgtcaagatgttccaggctcacaag
gaggccattagagaagccagtttctctcccactgataacaagtttgccacgtgctcagat
gacgggacggtccggatctgggacttcctgcgctgccatgaggagagaatcctccgaggt
cacggcgccgatgtcaagtgtgtcgactggcatcccaccaaagggctggtggtgtcgggc
agcaaagacagccaacagccaatcaaattctgggaccccaagacggggcagagcctggca
acgctccacgcccacaagaacacagtgatggaggtgaagtggaatctgaatggtaattgg
ctgctaacagcatcacgtgaccatctgtgtaaactgttcgacatcagaaacctgaaggag
gaactccaggtgtttagaggacacaagaaggaggccacagcggtggcctggcatcccgtc
catgagggtctgtttgccagcggcggctctgacggctccctgctcttctggcacacaggt
gtggagaaggaggtcggaggcatggagatggctcacgaaggaatgatctggagtctggcc
tggcatccgctgggtcacatcctgtgttcaggctccaacgaccacaccagtaaattctgg
acacggaaccggcccggtgataagatgagagaccgctacaacttgaacctgctccccggg
atgtcagaggacggcgtggagtatgatgacgtggacctgaacaacgtggcgtctatccct
ggtatgggcatcccagagcagctgaaggctgccatggagcaggagcagagcagtaaagag
gcggctcctgaggtggagatgtctatcccaggtctggactggggcatggacgaggtgatg
ggcaaggacaccaagaaggtccctcagaaaaaagtaccatacgccaaaccaatcccagca
cagttccaacaggcctgggcagaaaataaagttcccatgatgccccctggtggagacttg
tccaaagagcgtaaggtagaacagaaagtggacctgaagaagaagactcaggctgagctg
gagcaggagatggcagctctacagtacaccaaccccatgctgctggagcagatgaagatg
gaccggatgaatcaggtcaacactgatgggaacatggggcccccacagggacagggccct
ttgccccctttccctggtcctggaggtcccgggggcccgatgccttccaatcagcagggc
tataacatggctccgcagcagatgtccaacaacatgggtccccccatgggccctggagga
atgcagcccccgttcatgccccctggacagatggggcctccttctggaccgcagccacac
caagggcccccccagggtatgatggggccaccagacatgcaaggacctcaaggcatgcag
agacacccaggccctcccagaaacatgggcccccaagggccacatggtatgggacccaga
gggatgcaggggcctcctggtgggatgatgtgccccccaccgcggggtatgggtccaagg
gatcctcaggggcccccacctcaggggggtatgatgccacctgaggggaacatgatgggc
cctcagggttcgatgcagggaggtatgatgggaccccctcccaggacacatggcaacaat
tttggaatgggcaatatgcaggggccccctggggggatgcatgggcccccaggaaacatg
caaggacaccatgggaacatgcaggggcccccaggaaacatgcaaggacctcatggtaac
atgcagggtccaccaggaaacatgcagggccccgcttatatgcagcaccagggccaaaac
tcggggcccatgatgcacgggatgggtcagcaggggccaaacaacaaaggagaccctcgg
gggcccccaccaaaccaccacatgggccccccagaccgacagggtcctggagatcagggc
tcaggtccatactggggggataaccagcagggttggcgaggagctcaggactttgacgga
gtacaggacttccacggcagagaggagggctggagatctggacctggacaaggaccaggc
taccaggggggaggagggggaagccatcgaggaggcggtcacagaggaggaggaggaaac
ggggggaactggggccccgacgagaggttcagtggaggagagttcagaggacggagagat
gacaggttcaggggagggggccccggacggcccgggggccgaggttactctgaagagtat
ggggggcaggaggaaagctacgatgttcaggaggacatgggacgtggctgggagggtggg
ggaagagggagaccaccacgaggggggggtccaccccgaggaggaggaggtcatgacgga
tatcgtgatggacagatgcatgatgggtcttccccagcgggtcgtgagcgctcctcgtcc
cttcaggggatggacatggcatctctccccccccgtaaacgtccttggcaagatggacca
ggaacaggagacccccgagagtccccggggcctgatggagggcgcccccctcaggacggc
ggaggttatggtcctcctggtcggggtggacgaggcagttggggtcccggagggcctgga
cctggaccggtccttaggagaggaggaccaacacccagaggaccaccgagggggggtggg
cggggccgatag
DBGET
integrated database retrieval system
