KEGG   Cheilinus undulatus (humphead wrasse): 121520204
Entry
121520204         CDS       T07473                                 
Name
(RefSeq) collagen alpha-4(IV) chain-like
  KO
K06237  collagen type IV alpha
Organism
cud  Cheilinus undulatus (humphead wrasse)
Pathway
cud04382  Cornified envelope formation
cud04510  Focal adhesion
cud04512  ECM-receptor interaction
cud04518  Integrin signaling
cud04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:cud00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    121520204
   04518 Integrin signaling
    121520204
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    121520204
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    121520204
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    121520204
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cud04147]
    121520204
   00536 Glycosaminoglycan binding proteins [BR:cud00536]
    121520204
Exosome [BR:cud04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   121520204
Glycosaminoglycan binding proteins [BR:cud00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   121520204
SSDB
Motif
Pfam: Collagen C4
Other DBs
NCBI-GeneID: 121520204
NCBI-ProteinID: XP_041659510
LinkDB
AA seq 1672 aa
MGSSVTSATLWPLMWLLILTILVQKLIAGGSEDNCKGRDCTTCQCILAKGARGAPGRVGD
QGDRGQMGTRGRVGPPGEKGRIGANGTPGPAGPKGDRGETGAPGYPGNDGLSGHPGAGGE
PGLPGPDGCNGTRGRPGRSGTHGLDGLHGPPGLHGPKGFKGEPLYDRALPGLPGDPGVDG
ERGLPGRKGSPGSKGFTGPPGFPGAEGLEGARGARGQPGDPGASLAGDKGEDGEQGPTGK
QGPEEVIEFPPEFLPPKGYKGDRGRSGPCGLKGPQGDRGDYGQSIKGEQGILGFPGTRGL
SGFPGRDGSPGLQGLPGEKGLPGLFGREGPKGYIGDPGLPGPSRYEDGQDGRGPKGDQGF
PGPPGPPGDPGFMGNPGPPGPPGPVIPEVPGWPGPRGQPGEKGYKGEPGLFNEFDINRNP
GPKGAKGFPGPKGVTGLPGPPGCGDYYCEPGYPGDPGDPGPKGGPGFPGLKGIKGCVGDC
ECRSGGLNPGPPGPPGYTGPPGLPGPKGIIGDPGPKGDDGLRGRPGYPGSPGSEGQKGHK
GDSFVVGVKGAKGDRGLPGYLGPPGAKGQPGRVGPHGPTGDPGPPGSGYVGLPGRKGEPG
VPGPKGYPGSPGPAGPGFQGPKGLPGPKGDKGDAGRDGVRGPPGPPGESEPCCEIGIGLP
GRKGEQGEPGFPGVPGIDGTPGVQGLRGYKGMKGEDGGIGGVGLPGPPGPNGDPGNPGPS
GISLDGLPGPPGLPGSPGRKGAPGDVFSARPGEPGPPGRPGANGAVGFSGPPGNPGSPGA
QGQPGRPGYKGEQGANGDRGAPGPPGPTCTECDVEGVQGPPGSPGNPGSGGTTGRPGQKG
YKGETGPPGRGQRGPQGFPGPPGLPGPAGPRGPTGLLGDSGIDGPPGLKGEIGYSGRPGS
RGLPGRPGPPGPRGVQGEKGFDGRPGPPGYPGPPGYKGLHGPPGNPGPDMIVNVTKGPVG
PPGRRGQRGSHGPQGYKGLKGEPGDSGPDGWYGSLGPKGSTGAPGRGGRQGTPGPPGVKG
FPGPRGYPGHSGDLGDPGPSGRPGSTGSPGYPGAKGETGPSYGIPGPPGPKGMPGNDGPS
AFRGSPGDPGDPGRPGISGTPGPPGPPGDAGGQGQPGDPGPRGPRGNPGIPGFQGDTGGL
GPPGPPGSYGPPGPPGQPGLDGLNGLRGPKGMKGASGIGVIGPPGPDGYPGIKGLKGFQG
PPGATYPGPKGQIGPPGTTGHPGGPGEPGSPGIECRTPTPGPPGDAGYEGPPGPTGPPGE
PGRQGSSISIKGDPGPIGLPGIQGRKGSRGPQGPPGSHEYQGRRGPKGNIGPDGPSGSPG
PKGQRGDHGSFGPKGARGPHGDRGAKGPPGDSIHRPPEEAPPGPPGQPGGPGSVGSPGYA
GPPGAPGRKGEKGPVGSVGFPGSPGGPGLPGPVGEPGNSGQQGFPGPQGTSGPPGDPGEP
GYWTARRSGFLLVIHSQSVERPVCPEGSSQLWWGYSLVYLEGQEKAHTQDLGQAGSCLPV
FSTMPFSYCNKAACHYSSRNDKSYWLSTTASIPMMPLFGQEISSHISRCVVCETVSPAVA
FHSQDHTIPKCPPGWRSLWTGYSFLLHTGAGDEGGGQSLTSSGSCLHSFRTHPFIECQGA
RGSCHYFSNMYSFWLTTVSYNEQFVTPSSSTIKAADQQRRKTSQCHVCFRGL
NT seq 5019 nt   +upstreamnt  +downstreamnt
atgggatcctctgttacttctgcaactttgtggcccctcatgtggctcctgattctgaca
atcttggtgcagaaactcattgcaggagggagtgaggacaattgcaaagggagagactgc
acaacatgtcagtgtattcttgcaaaaggtgcacggggagctccaggaagggtaggtgat
cagggcgaccgaggacaaatgggaacaaggggacgtgtggggccacctggggagaaagga
aggataggagcaaatggaacacctggcccagcaggacccaaaggggaccgtggtgaaact
ggtgctcctggttatcctggaaatgatggcttgtcaggccaccctggagcaggtggtgag
cctggtttgccaggacctgacggctgtaatgggacacggggtcgaccaggaagaagtggt
acccatggtttggatggtctccatgggccaccgggattacatggacccaagggatttaaa
ggagaacctttgtatgaccgtgcccttccaggacttcctggggatcctggtgtagatgga
gagcggggtctgcctgggagaaaaggaagtccagggtccaaaggcttcactggcccgcct
ggctttcctggggctgagggtttggaaggagcaagaggtgcaagaggacaaccgggtgac
cctggagcatcactggcaggcgataagggggaagatggtgagcaaggcccaactggcaaa
caaggacctgaagaagtaatcgaatttcctccagaatttctcccacccaaaggttacaag
ggagaccgaggccgttctggtccatgtggactaaagggtccacagggtgatagaggagac
tatggtcaaagcattaaaggagagcaaggaatccttggtttccctggaacacggggtctt
tcagggtttcctggtagagatggatcaccaggacttcagggtttgcccggagagaaagga
cttccaggtctttttggaagagaagggccaaagggttacataggagatccaggtctccct
ggtccctctagatatgaggatggtcaagatggcagaggtcctaaaggtgaccagggtttt
cctggaccacctggacccccaggtgaccctggcttcatgggtaatcccggacctcctggc
ccaccagggcctgtcattccagaggtaccgggttggcctggtcctcgaggacagcctggt
gaaaagggatacaagggagagccaggattgtttaatgaatttgacatcaatcgaaatcca
ggaccaaagggtgctaaaggattccctggacctaaaggtgttacaggcctcccaggacct
ccaggatgtggagattactactgtgagcctggttacccaggggaccctggtgacccagga
cccaaaggaggtccaggattcccagggcttaaaggaattaaaggttgcgttggggactgt
gaatgcaggtcaggtgggctgaatccaggaccccctggtccacctggttatacagggcct
ccaggattgcctggacctaaagggatcataggagatccgggacccaaaggagatgatggt
ttaaggggacgaccaggctatccaggctctccaggttcagaaggacaaaagggtcataaa
ggggactcttttgtggtgggtgtgaaaggtgctaaaggtgacagaggattacctggatat
cttggtcctcctggagctaaaggtcagccaggacgtgttggcccacatggtcctacagga
gaccccggaccaccaggttctggatatgtaggactgcctggacgaaaaggggaacctggt
gttcctggacctaaggggtacccaggatctcctggccctgcaggtcctggttttcaaggc
cctaaggggcttcctggaccgaaaggagataaaggagatgctggccgggatggagttcgt
ggaccaccaggcccaccaggtgaaagtgagccatgctgtgaaattgggattgggttacct
ggtcgtaaaggagaacaaggtgaaccagggtttcctggtgttcctggaatagatggtacc
cctggagtccaaggattacgaggctataagggaatgaaaggagaagacgggggaattgga
ggggttggacttccaggtcctccaggtccaaatggagatccaggtaacccaggtccaagt
ggaattagcctggatggtcttccaggccctcctggattaccaggatctcctggtaggaag
ggtgcaccaggagatgtcttctctgccaggccaggagagccaggtcctcctggccgccct
ggtgcaaatggggcagtgggattcagtggccctcctggaaatccaggctctcctggtgca
caaggacaacctggacgcccaggctacaaaggagagcaaggagccaatggtgaccgtggc
gctcctggtcccccaggcccaacctgcaccgagtgcgatgtggagggagttcaaggccct
ccaggatctccaggaaaccctgggtcaggcggcacaacaggccgccctggtcagaagggt
tataaaggagaaacaggtccaccaggccgtggacagaggggaccacaaggtttccctggt
cctccaggtctgccaggtccagctggacctagaggccccactggcctgttgggagattct
ggaatagatggtccgccaggactgaaaggtgaaatagggtactctggcaggcctggcagt
agaggtttacccggtcgtcctggacctccaggaccaagaggtgtacagggagaaaaaggc
tttgatggacgcccaggtccccctggatatcctggaccccctggttacaaaggtttgcat
ggtccaccaggaaatcctggaccagatatgattgtgaatgtgacaaaaggcccagtggga
cccccaggaagaaggggacaacgaggatcacatggacctcaaggttacaagggtcttaag
ggagagccaggtgactcaggtccagatggatggtatggttctttagggccaaaaggtagc
actggggctccaggaaggggaggaagacaaggaactcctggaccccctggggtcaaaggt
ttccctggtccaaggggataccctggacacagcggagatctgggtgatccaggcccaagt
ggacgtccaggtagcacagggtcaccaggatacccaggggccaagggtgaaacagggccc
tcctatggaatacctggtccacctggacccaaaggaatgcctgggaatgatggacccagt
gcttttagagggagtccaggagatccaggtgaccctggacgtccaggaatctcaggaaca
ccaggacccccaggacccccaggggatgcaggagggcaaggacaaccaggtgaccctggg
ccacgtggcccacgaggtaatccaggcattccaggttttcaaggtgatactggaggactg
ggaccaccaggcccacctggctcatacggtcctccagggcctcctgggcaaccaggtttg
gatggactgaatgggcttagaggaccaaagggaatgaaaggagcaagtggaattggcgtc
attggtcctcctggtccagatggttatccaggtatcaaaggtctcaagggtttccaagga
cctccaggagccacttatcccggaccgaaaggccagattggcccacctggcaccacaggt
catccagggggtccaggagaacctggttcccctggcatagaatgccgtacaccaacacca
ggaccccctggagatgcaggatatgagggaccgccagggcccacaggcccccctggggaa
ccaggccgccaaggcagcagcatatctattaaaggagacccaggtccaattggtctccct
gggatacaaggacggaaggggagtaggggaccccaaggaccccctggatctcacgaatac
caaggacgtagagggcctaaaggtaatataggccctgatggtcctagtggctctcctgga
cctaaaggacagagaggtgaccatgggtcttttggtcccaagggagccagaggcccacat
ggtgaccgaggtgccaaaggtcctcccggggattctattcacagacccccagaagaggct
ccccctggaccaccaggacagcctggtggaccaggatcagtgggatctcctggctatgct
ggtcctccaggtgctccaggacgcaaaggagagaagggcccagtgggatctgttggcttc
cctggcagtcccggtggtcctggtcttcctggtccagtcggagagccaggaaattctggt
cagcaagggtttccaggacctcaaggtacctcgggtccacctggggatccaggtgagcca
gggtactggacagccaggagatcaggcttccttttggtgattcatagtcagtctgtggag
cgtccagtttgccctgaaggcagcagtcagctttggtggggctacagtctggtgtacttg
gagggacaagaaaaggctcacactcaagacctgggccaggctggttcctgtctccctgtt
ttctccaccatgcctttctcctactgcaacaaagcagcctgccattactccagccgcaat
gacaaatcctattggctctccaccacggcttccatacccatgatgccattgtttggccag
gagattagctcccacatcagccgctgtgtggtgtgtgagacggtgtcacctgcagtggct
tttcacagccaggatcacaccatcccaaaatgcccgcctggctggaggagtctctggacg
gggtattcattcctcctgcacactggagcaggtgatgaaggtggtggacagtctctgact
tcctctggtagctgccttcacagtttccggacacaccctttcatagagtgccagggtgca
cgtggttcctgccactacttttccaatatgtacagtttttggctgactactgtgagttat
aatgaacagtttgttaccccatcctccagcaccattaaggcagccgaccaacaaagacgc
aagacaagtcagtgccatgtctgtttccgagggctttaa

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