Cheilinus undulatus (humphead wrasse): 121520204
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Entry
121520204 CDS
T07473
Name
(RefSeq) collagen alpha-4(IV) chain-like
KO
K06237
collagen type IV alpha
Organism
cud
Cheilinus undulatus (humphead wrasse)
Pathway
cud04382
Cornified envelope formation
cud04510
Focal adhesion
cud04512
ECM-receptor interaction
cud04518
Integrin signaling
cud04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cud00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
121520204
04518 Integrin signaling
121520204
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
121520204
09142 Cell motility
04820 Cytoskeleton in muscle cells
121520204
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
121520204
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cud04147
]
121520204
00536 Glycosaminoglycan binding proteins [BR:
cud00536
]
121520204
Exosome [BR:
cud04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
121520204
Glycosaminoglycan binding proteins [BR:
cud00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
121520204
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
121520204
NCBI-ProteinID:
XP_041659510
LinkDB
All DBs
AA seq
1672 aa
AA seq
DB search
MGSSVTSATLWPLMWLLILTILVQKLIAGGSEDNCKGRDCTTCQCILAKGARGAPGRVGD
QGDRGQMGTRGRVGPPGEKGRIGANGTPGPAGPKGDRGETGAPGYPGNDGLSGHPGAGGE
PGLPGPDGCNGTRGRPGRSGTHGLDGLHGPPGLHGPKGFKGEPLYDRALPGLPGDPGVDG
ERGLPGRKGSPGSKGFTGPPGFPGAEGLEGARGARGQPGDPGASLAGDKGEDGEQGPTGK
QGPEEVIEFPPEFLPPKGYKGDRGRSGPCGLKGPQGDRGDYGQSIKGEQGILGFPGTRGL
SGFPGRDGSPGLQGLPGEKGLPGLFGREGPKGYIGDPGLPGPSRYEDGQDGRGPKGDQGF
PGPPGPPGDPGFMGNPGPPGPPGPVIPEVPGWPGPRGQPGEKGYKGEPGLFNEFDINRNP
GPKGAKGFPGPKGVTGLPGPPGCGDYYCEPGYPGDPGDPGPKGGPGFPGLKGIKGCVGDC
ECRSGGLNPGPPGPPGYTGPPGLPGPKGIIGDPGPKGDDGLRGRPGYPGSPGSEGQKGHK
GDSFVVGVKGAKGDRGLPGYLGPPGAKGQPGRVGPHGPTGDPGPPGSGYVGLPGRKGEPG
VPGPKGYPGSPGPAGPGFQGPKGLPGPKGDKGDAGRDGVRGPPGPPGESEPCCEIGIGLP
GRKGEQGEPGFPGVPGIDGTPGVQGLRGYKGMKGEDGGIGGVGLPGPPGPNGDPGNPGPS
GISLDGLPGPPGLPGSPGRKGAPGDVFSARPGEPGPPGRPGANGAVGFSGPPGNPGSPGA
QGQPGRPGYKGEQGANGDRGAPGPPGPTCTECDVEGVQGPPGSPGNPGSGGTTGRPGQKG
YKGETGPPGRGQRGPQGFPGPPGLPGPAGPRGPTGLLGDSGIDGPPGLKGEIGYSGRPGS
RGLPGRPGPPGPRGVQGEKGFDGRPGPPGYPGPPGYKGLHGPPGNPGPDMIVNVTKGPVG
PPGRRGQRGSHGPQGYKGLKGEPGDSGPDGWYGSLGPKGSTGAPGRGGRQGTPGPPGVKG
FPGPRGYPGHSGDLGDPGPSGRPGSTGSPGYPGAKGETGPSYGIPGPPGPKGMPGNDGPS
AFRGSPGDPGDPGRPGISGTPGPPGPPGDAGGQGQPGDPGPRGPRGNPGIPGFQGDTGGL
GPPGPPGSYGPPGPPGQPGLDGLNGLRGPKGMKGASGIGVIGPPGPDGYPGIKGLKGFQG
PPGATYPGPKGQIGPPGTTGHPGGPGEPGSPGIECRTPTPGPPGDAGYEGPPGPTGPPGE
PGRQGSSISIKGDPGPIGLPGIQGRKGSRGPQGPPGSHEYQGRRGPKGNIGPDGPSGSPG
PKGQRGDHGSFGPKGARGPHGDRGAKGPPGDSIHRPPEEAPPGPPGQPGGPGSVGSPGYA
GPPGAPGRKGEKGPVGSVGFPGSPGGPGLPGPVGEPGNSGQQGFPGPQGTSGPPGDPGEP
GYWTARRSGFLLVIHSQSVERPVCPEGSSQLWWGYSLVYLEGQEKAHTQDLGQAGSCLPV
FSTMPFSYCNKAACHYSSRNDKSYWLSTTASIPMMPLFGQEISSHISRCVVCETVSPAVA
FHSQDHTIPKCPPGWRSLWTGYSFLLHTGAGDEGGGQSLTSSGSCLHSFRTHPFIECQGA
RGSCHYFSNMYSFWLTTVSYNEQFVTPSSSTIKAADQQRRKTSQCHVCFRGL
NT seq
5019 nt
NT seq
+upstream
nt +downstream
nt
atgggatcctctgttacttctgcaactttgtggcccctcatgtggctcctgattctgaca
atcttggtgcagaaactcattgcaggagggagtgaggacaattgcaaagggagagactgc
acaacatgtcagtgtattcttgcaaaaggtgcacggggagctccaggaagggtaggtgat
cagggcgaccgaggacaaatgggaacaaggggacgtgtggggccacctggggagaaagga
aggataggagcaaatggaacacctggcccagcaggacccaaaggggaccgtggtgaaact
ggtgctcctggttatcctggaaatgatggcttgtcaggccaccctggagcaggtggtgag
cctggtttgccaggacctgacggctgtaatgggacacggggtcgaccaggaagaagtggt
acccatggtttggatggtctccatgggccaccgggattacatggacccaagggatttaaa
ggagaacctttgtatgaccgtgcccttccaggacttcctggggatcctggtgtagatgga
gagcggggtctgcctgggagaaaaggaagtccagggtccaaaggcttcactggcccgcct
ggctttcctggggctgagggtttggaaggagcaagaggtgcaagaggacaaccgggtgac
cctggagcatcactggcaggcgataagggggaagatggtgagcaaggcccaactggcaaa
caaggacctgaagaagtaatcgaatttcctccagaatttctcccacccaaaggttacaag
ggagaccgaggccgttctggtccatgtggactaaagggtccacagggtgatagaggagac
tatggtcaaagcattaaaggagagcaaggaatccttggtttccctggaacacggggtctt
tcagggtttcctggtagagatggatcaccaggacttcagggtttgcccggagagaaagga
cttccaggtctttttggaagagaagggccaaagggttacataggagatccaggtctccct
ggtccctctagatatgaggatggtcaagatggcagaggtcctaaaggtgaccagggtttt
cctggaccacctggacccccaggtgaccctggcttcatgggtaatcccggacctcctggc
ccaccagggcctgtcattccagaggtaccgggttggcctggtcctcgaggacagcctggt
gaaaagggatacaagggagagccaggattgtttaatgaatttgacatcaatcgaaatcca
ggaccaaagggtgctaaaggattccctggacctaaaggtgttacaggcctcccaggacct
ccaggatgtggagattactactgtgagcctggttacccaggggaccctggtgacccagga
cccaaaggaggtccaggattcccagggcttaaaggaattaaaggttgcgttggggactgt
gaatgcaggtcaggtgggctgaatccaggaccccctggtccacctggttatacagggcct
ccaggattgcctggacctaaagggatcataggagatccgggacccaaaggagatgatggt
ttaaggggacgaccaggctatccaggctctccaggttcagaaggacaaaagggtcataaa
ggggactcttttgtggtgggtgtgaaaggtgctaaaggtgacagaggattacctggatat
cttggtcctcctggagctaaaggtcagccaggacgtgttggcccacatggtcctacagga
gaccccggaccaccaggttctggatatgtaggactgcctggacgaaaaggggaacctggt
gttcctggacctaaggggtacccaggatctcctggccctgcaggtcctggttttcaaggc
cctaaggggcttcctggaccgaaaggagataaaggagatgctggccgggatggagttcgt
ggaccaccaggcccaccaggtgaaagtgagccatgctgtgaaattgggattgggttacct
ggtcgtaaaggagaacaaggtgaaccagggtttcctggtgttcctggaatagatggtacc
cctggagtccaaggattacgaggctataagggaatgaaaggagaagacgggggaattgga
ggggttggacttccaggtcctccaggtccaaatggagatccaggtaacccaggtccaagt
ggaattagcctggatggtcttccaggccctcctggattaccaggatctcctggtaggaag
ggtgcaccaggagatgtcttctctgccaggccaggagagccaggtcctcctggccgccct
ggtgcaaatggggcagtgggattcagtggccctcctggaaatccaggctctcctggtgca
caaggacaacctggacgcccaggctacaaaggagagcaaggagccaatggtgaccgtggc
gctcctggtcccccaggcccaacctgcaccgagtgcgatgtggagggagttcaaggccct
ccaggatctccaggaaaccctgggtcaggcggcacaacaggccgccctggtcagaagggt
tataaaggagaaacaggtccaccaggccgtggacagaggggaccacaaggtttccctggt
cctccaggtctgccaggtccagctggacctagaggccccactggcctgttgggagattct
ggaatagatggtccgccaggactgaaaggtgaaatagggtactctggcaggcctggcagt
agaggtttacccggtcgtcctggacctccaggaccaagaggtgtacagggagaaaaaggc
tttgatggacgcccaggtccccctggatatcctggaccccctggttacaaaggtttgcat
ggtccaccaggaaatcctggaccagatatgattgtgaatgtgacaaaaggcccagtggga
cccccaggaagaaggggacaacgaggatcacatggacctcaaggttacaagggtcttaag
ggagagccaggtgactcaggtccagatggatggtatggttctttagggccaaaaggtagc
actggggctccaggaaggggaggaagacaaggaactcctggaccccctggggtcaaaggt
ttccctggtccaaggggataccctggacacagcggagatctgggtgatccaggcccaagt
ggacgtccaggtagcacagggtcaccaggatacccaggggccaagggtgaaacagggccc
tcctatggaatacctggtccacctggacccaaaggaatgcctgggaatgatggacccagt
gcttttagagggagtccaggagatccaggtgaccctggacgtccaggaatctcaggaaca
ccaggacccccaggacccccaggggatgcaggagggcaaggacaaccaggtgaccctggg
ccacgtggcccacgaggtaatccaggcattccaggttttcaaggtgatactggaggactg
ggaccaccaggcccacctggctcatacggtcctccagggcctcctgggcaaccaggtttg
gatggactgaatgggcttagaggaccaaagggaatgaaaggagcaagtggaattggcgtc
attggtcctcctggtccagatggttatccaggtatcaaaggtctcaagggtttccaagga
cctccaggagccacttatcccggaccgaaaggccagattggcccacctggcaccacaggt
catccagggggtccaggagaacctggttcccctggcatagaatgccgtacaccaacacca
ggaccccctggagatgcaggatatgagggaccgccagggcccacaggcccccctggggaa
ccaggccgccaaggcagcagcatatctattaaaggagacccaggtccaattggtctccct
gggatacaaggacggaaggggagtaggggaccccaaggaccccctggatctcacgaatac
caaggacgtagagggcctaaaggtaatataggccctgatggtcctagtggctctcctgga
cctaaaggacagagaggtgaccatgggtcttttggtcccaagggagccagaggcccacat
ggtgaccgaggtgccaaaggtcctcccggggattctattcacagacccccagaagaggct
ccccctggaccaccaggacagcctggtggaccaggatcagtgggatctcctggctatgct
ggtcctccaggtgctccaggacgcaaaggagagaagggcccagtgggatctgttggcttc
cctggcagtcccggtggtcctggtcttcctggtccagtcggagagccaggaaattctggt
cagcaagggtttccaggacctcaaggtacctcgggtccacctggggatccaggtgagcca
gggtactggacagccaggagatcaggcttccttttggtgattcatagtcagtctgtggag
cgtccagtttgccctgaaggcagcagtcagctttggtggggctacagtctggtgtacttg
gagggacaagaaaaggctcacactcaagacctgggccaggctggttcctgtctccctgtt
ttctccaccatgcctttctcctactgcaacaaagcagcctgccattactccagccgcaat
gacaaatcctattggctctccaccacggcttccatacccatgatgccattgtttggccag
gagattagctcccacatcagccgctgtgtggtgtgtgagacggtgtcacctgcagtggct
tttcacagccaggatcacaccatcccaaaatgcccgcctggctggaggagtctctggacg
gggtattcattcctcctgcacactggagcaggtgatgaaggtggtggacagtctctgact
tcctctggtagctgccttcacagtttccggacacaccctttcatagagtgccagggtgca
cgtggttcctgccactacttttccaatatgtacagtttttggctgactactgtgagttat
aatgaacagtttgttaccccatcctccagcaccattaaggcagccgaccaacaaagacgc
aagacaagtcagtgccatgtctgtttccgagggctttaa
DBGET
integrated database retrieval system