Cheilinus undulatus (humphead wrasse): 121520305
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Entry
121520305 CDS
T07473
Symbol
prpf38b
Name
(RefSeq) pre-mRNA-splicing factor 38B
KO
K12850
pre-mRNA-splicing factor 38B
Organism
cud
Cheilinus undulatus (humphead wrasse)
Pathway
cud03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cud00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121520305 (prpf38b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cud03041
]
121520305 (prpf38b)
Spliceosome [BR:
cud03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
121520305 (prpf38b)
Complex C
U4/U6.U5 tri-SnRNP related factors
121520305 (prpf38b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP38
PBP_like_2
Motif
Other DBs
NCBI-GeneID:
121520305
NCBI-ProteinID:
XP_041659613
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Position
13:complement(28552455..28559886)
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AA seq
465 aa
AA seq
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MANVGNQLPTQAVSKPASGKHGNVLPLWGNEKTMNLNPMILTNVLSSPYFKVQLYELKTY
HEVVDEIYFKVTHVEPWEKGSRKTAGQTGMCGGVRGVGTGGIVSTAFCLLYKLFTLKLTR
KQLMGLITHTDSPYIRALGFMYIRYTQPPADLIDWYDDFLDDEEELDVKAGGGCVMTVGE
MLRSFLTKLEWFSTLFPRIPVPVQKAIDQQMKARPRKVAQKEPQEEEATYAEAGRQGERR
RSRTPRRTPSPRRSPKRSRSRSHHHEKDRHGPSFDKELERERDRQRKEREGRDRDRDRGD
RGDRERRRSRSADRNQDRRERRRSRSGSRDRRSERRDKDRDGGDDRSRRKDREHHKDRGS
ERERSRDKKSRGETDEKRHKDDRDRHRDERKAKRSSRSRSRERRHRSGGEEKSRKRERSH
DRDRERDGEQRSHKRSRSKERSHHQRESSNDHSRHTERRRSHSTE
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atggctaacgtcggaaaccagctaccaacacaggccgttagcaagcctgcatcaggaaaa
catggaaatgtattacccctgtggggtaacgaaaagactatgaaccttaacccaatgatt
cttacaaatgtgctgtcttcgccgtatttcaaagttcagctttatgaacttaagacctat
cacgaagtggtggacgaaatctacttcaaggtgactcacgttgaaccctgggagaaaggg
agtagaaagactgcgggccagactggaatgtgcggaggggtgcgtggagttggaactggt
ggtattgtgtccactgctttctgtcttctttataaactgtttactctcaagctgacccgc
aaacagctgatgggtttgatcacccacacagactctccatatatcagagcccttggcttc
atgtacataagatatactcagcctccagcagatttgatagactggtatgatgacttcctg
gatgatgaggaggagcttgacgtaaaggcagggggtggttgcgtgatgacagttggagag
atgctgcgctccttcttgaccaaactggagtggttctccactctgttcccccgtatcccc
gtgcctgtgcagaaagctatagaccagcagatgaaagccaggcctcgtaaggtggctcag
aaagagccgcaggaggaagaagccacatatgcagaggcaggaaggcaaggagaacgacgc
cgctcaaggacacccagacggacaccgagcccccgaaggtctcccaaaaggtcaaggagc
cggagccaccatcatgagaaggaccgtcatggacccagctttgacaaagagctggagaga
gagcgggaccgccagaggaaagagagagagggaagggacagggatagggacagaggggac
cgaggggacagggagaggcgacggtctcgcagtgctgacagaaaccaagaccgacgagaa
cgcaggagaagtcgcagtggcagccgggatcgaaggagcgaacgtagagacaaagacaga
gatggcggggacgacaggagcagaaggaaggacagggagcaccacaaggatagaggctct
gagagggagaggtcccgggataaaaagagcaggggagagactgatgaaaagaggcacaaa
gacgacagggacagacaccgagacgagaggaaggccaagaggtcgagtcggagtcgaagc
agggagaggaggcacaggagcgggggagaggagaagagcaggaaaagagagcgcagccac
gaccgagacagggaaagagacggagaacagcgttctcacaaacgaagtcgtagcaaagag
cgaagccatcatcagcgagagtccagcaatgaccatagtagacatactgaacgcagaagg
agtcatagcactgagtaa
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