Cheilinus undulatus (humphead wrasse): 121520489
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Entry
121520489 CDS
T07473
Symbol
chd8
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 8 isoform X1
KO
K04494
chromodomain helicase DNA binding protein 8 [EC:5.6.2.-]
Organism
cud
Cheilinus undulatus (humphead wrasse)
Pathway
cud04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
cud00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
121520489 (chd8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cud03036
]
121520489 (chd8)
Chromosome and associated proteins [BR:
cud03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
121520489 (chd8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
Helicase_C
Chromo
BRK
ResIII
HDA2-3
HTH_Hrp3
Chromo_MIT1
MUN
Motif
Other DBs
NCBI-GeneID:
121520489
NCBI-ProteinID:
XP_041659896
LinkDB
All DBs
Position
13:41568488..41597545
Genome browser
AA seq
2580 aa
AA seq
DB search
MADPIMDLFEDTPLFNLDALPDDSFTQGSSDPVEEALKLALGQVDPPAEPELPVNTGLSI
PVATPVIPDPAPVPVPTQQPVPVVTAQTVSIAAAPTVAPVPVDTVPQIQPQTTIPIASNT
SVAPSSTVLLSSPLTVSTTTTATTPQLTQITHQLTPQQLAAITQQAGGKIVILKGPQGQA
QVLQTVSGATGQTSGKVIRVLSGTPLKPGMSILQGGTVLNQASPGQAQVKVGTAGVQRLL
QSPNGPVKQMLLTTVPQQTQGQQVQVQIPAQTQIAQGQTQVQVQPQAQTAQIQVQPQAQA
AQIQVQTPGQVQLQPAMAAQTPGAEAKRITLVLQQPSQTAAPSGQAVAAQQQVTQVQQVQ
AAQAGQQQQAQAPARLVLGQLPGGKLVLQGSQLAALTQARAGGQAGGQPKVLTIQLQVQQ
QPNQQGGVKYQLVSGAGNTGSPQVLQISQGQGGQRVAVPLKMLLQPQTSSATSAGGTVSV
VKVINSSAGPSTTTTTPSQAIRITKAPGDSAPVRRVEILCKQEKANRIVAEAIARAKARG
EKNLPRVLNQDELPSSQTSPEAGGTVTVVSAAKKKSSGGGSKKKSPVAGAATPKTPGGGD
KKGKVKMPGGPTGVVGGTVTPGAGNKSKSKTKTNTITLVGAKKRKRNASSDHSDGEMSPA
SPAALEEDLITKRRSNRVVKRKKYTEDLDIKITDDEDEQEDIDVTTTAAAVASISGGTAA
QLKQELELDVDGQPSMQFFVENPSEEDAAIVDKVLSMRLTKKEVSPGQYTNVEEFFVKYK
NYSYLHCEWASLEQLEKDKRIHQKIKRFKTKHAQMRHLFQEEEEPFNPDYVEVDRILDVS
HSVDKDNGEPVVYYLVKWCSLPYEDATWELKEDVDEGKVEEFGKIANRQPRLKRTPRPPA
ASWKKLEETREYKNGNTLREYQLEGVNWLLFNWYNRQNCILADEMGLGKTIQSIALLSEV
YSAGIQGPFLVIAPLSTITNWEREFSTWTHMNAIVYHGSLASRQMIQQYEMYCKDDKEHL
IPGAYKFDALITTFEMILSDCPELREISWRCVIIDEAHRLKNRNCKLLDSLKMLDLEHKV
LLTGTPLQNTVEELFSLLHFLEPAQFPSETEFLRDFGDLKTEEQVQKLQAILKPMMLRRL
KEDVEKNLAPKQETIIEVELTDVQKKYYRAILERNFSFLSLGANSNSNVPNLLNTMMELR
KCCNHPYLINGAEEKIVAELREVYDPLAPDFHLQALIRSAGKLVLLDKLLPRLKAGGHKV
LIFSQMVRCLDILEDYLINKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAG
GLGINLTAADTCVIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREMLDKAS
LKLGLDRAVLQSMSGNKDKDNVNGIQQFSKKEIEDLLRKGAYAAIMDENDEGSRFCEEDI
DQILQRRATTITIESEGKGSTFSKASFVASENRNDIALDDPEFWQKWAKKADIDMDTINR
KNTLVIDTPRVRKQTRQYSSLRGEGGDLSDLDSDDEYPPANSRQSRASRRADRHSGGGYG
RTDCFRVEKHLLVYGWGRWRDILSHARCKRRLSERDVETICRVILVFCLLHYRGDENIKS
FIWELITPPENGREPQTLLNHSGLSIPVPRGRKGKRVKAQSTFDVQKVEWIRKYNPDTLL
LDDSYRKHLKHQCNKVLLRVRMLYYLKQEVIGEHSDSVLKGADIRDLDIWMPEMEQQEVP
ARWWDAESDRSLLAGVFKHGYEMYTTMRADPCLCFMERCGRPDDKAIDAEQHTGDPEMGD
DADYDKYSEDPEFKPASRHAKDLFEEPDSMNVDDEISVEDKVAPVIVENTSSLSSSCDWP
SSSSLTARLRRLITAFQRSYRQEQLKIEAEAKGDRRRRRCEQASKLKEIARQERQQRWTR
REECDFYRVVSTFGVEKIKKESGLQESADPEFDWSRFRTFARLDKKTDESLSRYFRSFVA
MCRRVCHLRPGRDEDPSEPTTTVAPITEERASRTLYRISLLRRLRERVLPHPSLEERLPM
APPSSELPAWWNIPDHDRQLMLGAALHGVSRTELSIYSDPQFTFVQAREDFIQNQQAPPP
PPPPQGPPMMSLCQPKTEEDMLGVKEEGVEEEAQLLGGPISTNLQSTPLSHHDGKVAGQG
WSLKRNKIKVGKSGRKVEGGSDSDSDSDSGSSSSDRSGSSDDSGESEEETDGRMKLCDAD
EENSLLSMTPSQDGIPPPDPLRVDWPKDRILINRLDNLCTLVLSGQWPSGRRYVSEAQLN
PSSELVGDEMAYTRVMRKPIGTPGGPGADGDDGEFTVKLLKEEGLKLTFSKQALLPNGSG
GESSSRKKRKDQEFSDPDGLHDPLERTPRRRDPPTWLKENPDYEVEGDMLELLVNRSKRK
RRRRADKALTGSEKVKVINMRTGKKVGAAFCPMLQDLREYLEENPDNAVAPEWSDAVRNS
GFLPETFFHRLLTEHSEIPKKSRRRHHHHHHHHHHTPEPTPEEPTLDGVEETLVSDGAYM
MDEEDLETSHHFLTSPDFDVKMEGGDSLSQGDYDSSDQEALLDDVIMAQKSSDSSSSSED
NT seq
7743 nt
NT seq
+upstream
nt +downstream
nt
atggcagatcctatcatggacctctttgaggacacgcccctgtttaacctggacgcccta
cctgatgactccttcactcagggctcttctgaccccgtggaggaggcgcttaagctggct
ttgggccaagtggacccaccagcagagcccgagctcccagtcaacacgggcctcagtatt
cctgtagcaactcctgtcatccctgaccctgcccctgttccagtccccacacagcagcca
gtgccagtggtgactgctcagactgtttccatagcagcagctcccactgtagcccctgtc
cctgttgatactgtacctcagatccagccccagaccaccatacccattgccagcaacacc
agcgtggccccaagtagcactgtcctgctaagctcacctctgactgtttccaccaccacc
accgccaccacgccgcagctcactcagataacccaccagctcacgcctcagcagctagct
gccatcacgcagcaggccggggggaaaattgtcattctcaaaggtccccaggggcaggcc
caggtcctgcagactgtctcaggggccacaggccaaacaagtggaaaggtcattcgtgtg
ctgtctggcacacctctgaagcctggcatgtccattctgcaggggggcacggtcctgaat
caggcaagcccaggacaagcccaagtcaaggtgggcactgcaggggtacagaggctactg
cagtctcccaacgggcccgtaaaacagatgctgctgaccaccgtgcctcagcagacgcaa
ggacagcaggttcaggtgcagatcccggctcagacacagattgctcaaggccagactcaa
gtccaagttcagccccaagcccagactgcccagatccaggtacaaccccaggcccaggca
gctcagatccaggtccagacaccaggtcaggtgcagctccagcccgccatggcagcccag
acaccgggtgccgaggccaagcggatcaccctggttctccagcagccctcccagactgct
gctccatcgggccaagctgtggcggcccagcagcaggtcactcaagtccagcaagttcag
gcagctcaagcaggccaacagcagcaggcccaggccccagctagactggtgctgggtcag
ctccctggaggaaaactggtgctccaaggaagccagctcgcagccctgacccaggctcgg
gctggaggacaagctggagggcagcccaaagtcctcacaattcagctgcaggtgcagcag
cagcccaaccaacaaggaggagtaaagtaccagctggtgtcaggtgctggaaacaccggc
agcccacaggtgttgcagatctcacaaggccaaggaggacagagagtcgcagtgccactc
aaaatgctcctgcagccacagacgagctcggcaacctcggcggggggaacagtctctgtg
gttaaggtcatcaactcgtctgcaggaccctcaactacaaccaccactccgtcccaggcc
atccgcatcaccaaagcccccggcgactccgcccctgtgcgacgggtggagatcctgtgc
aagcaggagaaagcgaaccgcatcgtagctgaagccatcgcccgggccaaagcacgcggt
gagaagaatcttccccgagtcctgaaccaggacgagcttccatcgtcacagacctccccg
gaagcaggaggcaccgtgaccgtggtgtctgccgcgaagaaaaagagcagcggaggagga
agcaagaaaaagagtcccgtagctggagcagcaacgcccaaaacgccaggagggggtgac
aaaaaaggcaaagtaaagatgccaggaggaccaacaggagtggttggaggcacagtaacg
cctggagcagggaacaaaagcaagagcaagactaagacaaacactataactcttgtggga
gcaaaaaagagaaagagaaatgcgtcctcagatcactctgatggggagatgagccctgcc
tcacctgctgcactggaggaggatctgattacgaagaggcgctccaatcgtgtagtaaaa
aggaagaaatacacagaagacctggacattaagataacggatgatgaggacgagcaggaa
gatatagatgttactacgaccgcggctgccgtggcctccatcagtggtgggacggcagcg
cagcttaagcaggagttggagctggatgtggacgggcagcccagcatgcagttctttgtg
gaaaacccaagtgaagaagatgctgctattgtggacaaagttctctcaatgaggctgaca
aagaaggaggtgtcacctggccagtacacaaacgtcgaggaattctttgtcaaatacaag
aactattcatacttacactgtgagtgggccagtttggagcagctggagaaagataagagg
atccatcagaagatcaagaggtttaagaccaaacacgcacagatgaggcacctcttccag
gaggaggaggagccttttaaccctgactatgtggaggtggaccggatcctggatgtgtcc
cacagcgtggacaaggacaacggagagcctgttgtctactacctggtgaagtggtgctct
ctgccttacgaggacgccacctgggagctgaaggaagacgtagacgagggaaaggtcgag
gagtttggcaaaattgcaaatcgacaacctcgcctgaagagaacgccacggccgcctgct
gcttcatggaagaaactggaggagaccagagagtacaaaaatggaaacacgctcagagag
tatcagctggaaggagtcaactggcttctcttcaactggtacaacaggcagaactgtatc
ctggcggatgaaatgggtctgggtaagacgatccagtccatcgctctgttatctgaggtt
tactctgctggaattcagggccctttcctggtcatcgctcccctctccaccatcaccaac
tgggagagggagttctccacatggacccacatgaatgccatcgtctaccacggcagcctg
gccagccgacagatgatccagcagtatgagatgtactgcaaggacgacaaggagcacttg
attccaggtgcctacaagtttgacgccctcataaccacctttgagatgattttatctgac
tgccccgagctgagggagatctcctggcgctgcgtgatcatcgacgaagctcatcgcctc
aagaatagaaactgcaaactgttggacagtttgaagatgttggatctggaacacaaagtg
ctattgacaggcactcctcttcaaaacactgtggaggaactctttagtctgcttcatttt
ctggagcctgctcagttcccctctgagactgaattcctgagagactttggagacctcaaa
acagaggaacaggttcagaagctgcaggccatcttgaaacccatgatgttacgaaggctc
aaagaggatgtcgagaagaacttggcacccaaacaggagaccatcattgaggttgagtta
acggacgtccagaagaagtactaccgggccatcctggagaggaacttcagcttcttgagt
ttaggagcaaacagtaacagtaatgtccccaacctgctcaacacaatgatggagctgcgc
aagtgctgcaaccacccctacctcatcaatggcgcggaggagaagatcgtagcggagttg
cgggaggtgtacgaccccctggctcccgacttccatttgcaggccctcattcggtcggcc
ggcaaactggtgctgctggacaagcttctgcctcgcctcaaggcaggcggccacaaagtg
ctcatcttctcccagatggtgcgctgcttagacattctggaggactacctcattaacaag
agatacctgtatgaacgtattgatggcagagtgcgtgggaacttacgacaagctgccatt
gatcgcttcagtaaacctgactcagacagatttgtcttcctgctgtgtacccgtgctggt
ggcctgggtattaacctcactgctgctgacacctgtgtcatatttgactctgactggaac
cctcagaatgacctgcaggcgcaagcacggtgtcatcgtattggccagtctaaagctgtc
aaagtctaccgtctgatcacaaggaactcctatgagagggagatgctggacaaagcaagt
ttaaagctcggcctggaccgcgctgtcctgcagagcatgagtggaaataaagacaaagac
aatgtcaacgggatccagcagttctcaaagaaggagattgaggacctgctgaggaaagga
gcctacgctgccatcatggatgagaacgatgagggcagtcgcttctgcgaggaagacatc
gaccagatccttcagcgaagagccaccaccatcaccattgagagcgagggcaaaggatcc
acgttctccaaggccagctttgtggcctctgagaaccgcaatgacatcgctttggatgat
cctgaattctggcagaagtgggcaaagaaagccgacatagacatggacaccatcaaccga
aagaacaccctcgtcattgacacccctagggtgcgaaaacagacacgtcagtactccagt
ctacgaggtgaaggtggagacctgtctgatctggacagcgatgatgagtatcctcccgcc
aactccagacagtcacgtgcctcccgacgtgccgaccgccacagtggagggggatatgga
cgcacagactgtttccgggtggagaaacacctgcttgtctacggttggggtcgctggagg
gacattttgtcccatgctagatgtaaacgccgtctgagtgaacgtgacgttgagacgatc
tgtcgtgtcattcttgtgttttgtttgctccattaccggggagatgaaaacatcaagagt
ttcatctgggagctcatcacaccgcctgagaacggacgtgaaccccagacactactcaac
cactctggtctgtctatccccgttccaagaggcaggaagggtaagagggtaaaggctcag
agcacattcgacgttcagaaggtggagtggatccgtaaatacaacccggacactctgctt
ctcgatgacagctaccgcaaacacctcaaacaccagtgcaacaaggtgttgctgagggta
cgaatgctctactacctgaaacaggaagtcattggtgaacattcagactctgtcctgaaa
ggggctgacatcagggatcttgacatctggatgcctgagatggagcagcaggaggttcct
gcaagatggtgggatgcagagtccgaccgctccctgctggcaggtgtatttaaacatggt
tatgagatgtacaccaccatgcgtgctgatccgtgcctctgtttcatggagagatgtggt
cggcctgatgacaaggccatcgatgctgagcagcacactggtgatccagagatgggagac
gatgctgactatgataaatactcggaggatccagagttcaagcctgcatcaagacatgcc
aaagatcttttcgaggagcctgactccatgaacgttgacgatgagatctccgtggaggat
aaggtggcaccagtgattgtagaaaacacatccagcctgagcagctcttgtgattggcca
tccagctcgtcacttacagcgcgactgcggcggctcatcactgctttccagcgcagctac
agacaggagcagctgaagatcgaagccgaggctaagggcgaccgcagacgcaggcggtgt
gaacaggccagtaagctgaaggagattgcacggcaggagcgccagcagaggtggacacgg
agggaagaatgcgacttctaccgtgtggtgtcaactttcggtgtggagaagataaagaag
gagtcgggtcttcaggagagtgctgaccctgaatttgactggagccgtttccgaaccttt
gctcgtctggataaaaaaacagacgagagcctcagccgttacttccgctcttttgttgcc
atgtgtcgaagagtttgccacctgcgcccaggccgggatgaagatccatcagagcccacc
accactgttgccccgatcacagaggagcgtgcttcccgtaccctttaccgtatcagcctc
ctacgacgccttcgagagcgagtcttgcctcatccctccctggaggagcgtcttcctatg
gccccgcctagctccgagttgcctgcctggtggaacataccggaccacgatcgacagctg
atgttgggtgctgcgctgcatggcgtgagccgcactgagctctccatttactcagaccca
cagttcaccttcgttcaggctcgggaagacttcatccagaaccagcaagcccctccacct
ccacctccacctcagggaccacccatgatgtccctctgccagccgaagactgaggaggac
atgctgggtgtgaaggaggagggggttgaagaggaggctcagctgcttggaggtccgatc
agcaccaacctgcaaagtacgcctttgagtcaccatgatggtaaagtagcggggcagggc
tggagcctgaagaggaacaagataaaggttggaaaatcaggaaggaaagtagagggaggc
tcggattcagattctgattcagattctggatcatcttcatctgaccgatcaggcagcagt
gatgacagtggggagagcgaggaggagacagacggacgcatgaagctctgtgatgcagat
gaagagaacagtttactgtcgatgactccctctcaggacggtattcctcctcctgatcca
ctcagagtggactggcccaaggaccgcatcttgatcaaccgtctggacaatttgtgcacg
ttggtgctgagcggtcagtggccctcagggcgacgttatgtatccgaggctcagctaaac
cccagctcagagctggtgggagatgagatggcttacacgagggtgatgcgtaaacccatc
ggcacacctggtggccccggggctgatggagacgacggagaattcactgtgaagctcctg
aaggaggaggggctgaagctgaccttctccaaacaggctctgctgcccaacggctcagga
ggagagagcagcagtcgcaagaagcgaaaggaccaagaattttctgacccagatgggctc
catgacccactggagcggactcctcggcgcagggaccctcccacctggttgaaggagaac
ccagattatgaggttgagggagacatgctggagcttctggtgaataggagcaagaggaag
aggaggaggagggcagataaagctctgacgggcagtgagaaggtcaaagtcatcaacatg
aggacaggaaagaaggttggtgctgctttctgtccaatgctgcaagatctgagggaatac
ctggaggagaatcctgacaacgctgtagcacctgagtggtctgatgctgttagaaactct
ggtttcctgcctgagaccttcttccatcgactgctgaccgagcactcggagatccccaag
aagagccgacgccggcatcaccaccaccaccaccatcatcaccacactccagagcccaca
ccagaagagcccacccttgatggagtggaggagacgctggtctcagacggagcctacatg
atggacgaggaggacctggagacctcccatcactttcttaccagtccggactttgacgtt
aaaatggagggcggcgacagcctctctcaaggggactatgacagctcagatcaagaggcg
ctattagacgatgtgattatggcacagaaaagctccgactcctcgtcaagctccgaggat
tga
DBGET
integrated database retrieval system
