Cheilinus undulatus (humphead wrasse): 121520553
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Entry
121520553 CDS
T07473
Symbol
rc3h1b
Name
(RefSeq) roquin-1 isoform X1
KO
K15690
RING finger and CCCH-type zinc finger domain-containing protein
Organism
cud
Cheilinus undulatus (humphead wrasse)
Brite
KEGG Orthology (KO) [BR:
cud00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cud03000
]
121520553 (rc3h1b)
04121 Ubiquitin system [BR:
cud04121
]
121520553 (rc3h1b)
Transcription factors [BR:
cud03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
121520553 (rc3h1b)
Ubiquitin system [BR:
cud04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
121520553 (rc3h1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Roquin_1_2-like_ROQ
ROQ_II
zf-RING_5
zf-RING_UBOX
zf-RING_2
zf-C3HC4_4
zf-C3HC4_3
zf-C3HC4
zf-CCCH
zf-C3HC4_2
zf-CCCH_4
Prok-RING_4
zf-CCCH_UNK
zf_CCCH_4
FYVE
NS3_helicase_C
Baculo_IE-1
RING_XB3-XBAT31
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
121520553
NCBI-ProteinID:
XP_041659993
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All DBs
Position
LG13
Genome browser
AA seq
1135 aa
AA seq
DB search
MPVQAPQWTEFLLCPICTQTFEETVRRPISLGCGHTVCKMCLNKLHRKACPFDQTAISTD
IEQLPVNTALLQLVGGQVPKAQPVALITSPEDSQHYEEARQCVEELALYLKPLSNTRGVG
LSSTAQSILSRPMQRKLVTLVHCQLVEEEGRVRAMRAARSLGERTVTELILQHQNPQQLS
SNLWAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKT
SIGHVVQLLYRASCFKVTKRDEDSSLMQLKEEFRTYEALRREHDSQIVQIAMEGGLRIAP
DQWSSLLYGDQSHKSHMQSIIDKLQTPASFAQSVQELTIALQRTGDPANLNRLRPHLELL
ANIDPSPDAPPPTWEQLEKGLVAVKTVVHGLVDFIQNHSKKGADPQQPPQHSKYKTYMCR
DMKQKGGCPRGASCTFAHSQEELEKYRKMNKRLAARLPGSGGLMPDDGLPLDVAVTRKPS
PLTNGSNAPSLPQLIPRGTDSVPYELLRKPMKMDGGSPSAPGSPPDPLDPVSKPGIPLPP
HALAHPRMPADHLSGVKHMPVVARGLPVYPQQQLPEICYDARPTPSASQYEPPQYATGYP
YQQPPQYVPRDYMRNPPPPSESGPPYQDPYPGYSHPERPYQAPHSGPPFSYPHPPHHDRG
RHGTYTGPPPPPQPYASQRDGLVRMSPAPLDVPPQSAGQANSLYHQEPSARDRYPPDGYY
PPGAQPPPMRAYARGPSYSGSQPSLDYLHRRRQELLSQLEERKVISPPPFAASPTLPHPF
PSDYPPEYGDESSKTMMKCREPDYAGQYSPWSCETIGSYIGTKDPKPKDVMVPGTMEMMN
VEAKGLREPSLEAPRRGTEVKDDDPIIPFGPQPTVSRFGAISRTTKTGYQTTGPVQAIAA
TPQNPNSKHMAMPAEYTYGSQGGWSGASYSSHQAASSSQGHFSERLPMAATDREQLKIEL
QQVNQQINQQTQMRSIEAANNPLLLQREAGSLAGQPVQPSQSQAVAAQQQQPKWPAGGGS
TTSVSSEQLSLELHQVEREIGKRTREMALENQVAHDVQQYKMKPAENGQPEHKAQLEEIS
LALGEVSNGSSSLQESAVGGSMLSLTNKTSALSLCSDPGATGSEMQKNGVVHSCS
NT seq
3408 nt
NT seq
+upstream
nt +downstream
nt
atgccagtgcaagcaccacaatggacagagttcctgctgtgcccaatctgcacacagaca
ttcgaagagactgttcgcaggcccatcagtttgggctgtggacatactgtctgcaagatg
tgcctgaacaagttgcaccgaaaggcctgtccctttgaccagacagccatcagtacagac
atcgagcagttacctgtcaacacagccctgttgcagctggtgggaggccaggtacctaag
gctcagccagtggccttgataaccagtccagaggactcgcagcattatgaggaggccagg
cagtgtgtggaggagctggctctctacctcaaacctctcagcaacaccagaggtgtgggt
ctgagcagcacagcccagagcattctgagtcgacccatgcagaggaaactggtaactctt
gtccactgccagctggtagaggaggaaggccgtgtaagagccatgagagctgcccgctct
ctgggagaaagaacagtcacagagctcatcttgcaacatcagaatccccagcagctctcc
tccaatctgtgggctgctgtgcgtgcacgaggatgccagtttctaggcccagccatgcag
gaggaagctctcaaattggtccttctcgctctggaggatggctctgctctgtccaggaaa
gtgttggttctctttgttgtccagcggcttgaaccccgctttccacaggcctctaagacc
agtataggccacgtggtgcagctcctctatagggcctcctgcttcaaggtcaccaaaagg
gatgaagattcatccctgatgcagttgaaagaggagttccgtacttatgaggccctgcgg
cgtgagcatgactctcagatagttcagatagccatggagggggggctacgcattgcacct
gaccagtggtcttctctgttgtatggagatcagtctcacaagtcacacatgcagtctatc
attgataagctgcagacccctgcctcttttgctcagagtgttcaggagctaacaattgcg
ctgcagaggactggagacccagccaacctcaacaggttgcggccccacctggagctactg
gccaacattgatccaagtcctgatgccccccctccaacatgggagcagcttgaaaaaggg
ttagttgcagtcaaaacagtggtgcatggcctagttgacttcatccagaaccacagcaag
aaaggagcggaccctcagcagcctcctcagcacagcaagtacaagacttacatgtgccgt
gacatgaaacagaagggaggctgtcctcggggagccagctgtacttttgctcattctcag
gaagaactagaaaagtatcgtaagatgaataaacgtctagcagctcgcctcccaggctca
ggagggctcatgccagatgacggccttcctcttgatgtagcagtgacccggaagccttcg
cctctcaccaacggcagcaatgcaccctctttgccccagctcataccccgtggcacagac
tcagtcccttatgagcttctgcgaaaacccatgaagatggatggaggcagtcccagcgcc
ccaggatccccacctgatcccctggaccctgtatccaaacctggcattcctcttccacct
catgccttggcccacccaagaatgccagcagaccacctctctggggtgaagcacatgcct
gtagtagcaagaggtctgcctgtgtacccacaacaacagctccctgagatatgctatgac
gctcgccccacaccctctgcttctcagtatgagcctccacagtatgccacagggtacccc
taccaacagccaccacagtatgtccctcgggattacatgcgtaaccctccgccacccagt
gagtcagggcccccataccaagacccttaccccggatacagccacccagaacgtccctat
caggcccctcactctggcccaccattctcctaccctcaccctcctcaccatgaccgaggt
cgccatgggacatatactggcccaccacctcccccgcagccttatgcgtctcagagggat
ggtttggtcagaatgagtcctgctcctctggatgttccaccacagtcagcaggacaggcc
aactccctatatcaccaggagcccagtgctcgggacagataccccccagatggctattat
ccaccaggagcccagcctcctcctatgagggcttatgccagggggccatcatatagtggt
tcacagccaagcctggactatctgcacagacgtcggcaggagctgttatcccagctagag
gaaaggaaggtcatctctcctccgccatttgctgcctctccaactcttccccatcccttc
cccagtgattaccctccagagtatggggatgagagctctaaaacaatgatgaagtgcaga
gagcctgattatgcaggccagtactccccctggtcttgtgaaaccattggctcctatatt
ggcacaaaggacccaaaacccaaagacgtcatggttcctggtaccatggagatgatgaat
gtggaggcaaagggtcttcgagaaccatcactggaggctccccggaggggcacagaagtc
aaagatgatgaccccattatcccttttggcccccaacctactgtatcacgctttggtgca
atctcccgcaccacaaagacgggttaccagaccaccggccccgtacaggctatagccgcc
actcctcagaacccaaactctaaacatatggccatgccagcagaatacacatatggaagc
caaggagggtggagtggagcttcatactcctcccaccaggctgcctcctcctctcaggga
cattttagtgagcgcctgcctatggcagcaacagacagagaacagttaaagattgagctg
cagcaagttaatcagcagatcaatcaacagactcagatgagaagcatagaggctgccaat
aaccctttactgcttcagagggaggctggttcattagcaggccagcctgtgcagcccagc
cagagccaggcagtagcagcccagcagcaacagcccaagtggccagcagggggagggagt
acaacatccgtctccagtgaacagctaagcttggagctccaccaggtggagagagagatc
ggcaagaggactcgagaaatggctctggaaaaccaagtagcccatgatgttcagcagtac
aagatgaaacctgcagagaacggacaaccagagcacaaagcacagctggaagaaatctcc
ttggctcttggcgaggtgtcaaacggctccagcagtctgcaagaaagtgcagtgggcggg
tccatgctgtcactgaccaataagacgtctgcgctgagcctgtgctctgatccaggtgcc
actggttcagagatgcagaagaatggcgttgtccattcctgctcatag
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integrated database retrieval system
