Cheilinus undulatus (humphead wrasse): 121520625
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Entry
121520625 CDS
T07473
Symbol
copb2
Name
(RefSeq) coatomer subunit beta'
KO
K17302
coatomer subunit beta'
Organism
cud
Cheilinus undulatus (humphead wrasse)
Brite
KEGG Orthology (KO) [BR:
cud00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cud04131
]
121520625 (copb2)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cud04147
]
121520625 (copb2)
Membrane trafficking [BR:
cud04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
121520625 (copb2)
Exosome [BR:
cud04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
121520625 (copb2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B-prop_COPA_B_2nd
TPR_COPA_B
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
Beta-prop_WDR75_1st
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
NBCH_WD40
ANAPC4_WD40
Beta-prop_HPS5
PEP5_VPS11_N
Beta-prop_SCAP
Beta-prop_IFT140_1st
Beta-prop_SPT8
WDR90_beta-prop_4th
Beta-prop_DCAF4
WD40_RFWD3
Beta-prop_IFT122_1st
Beta-prop_LRRK2
Beta-prop_WDR19_1st
Beta-prop_Vps41
Beta-prop_WDR35_TULP_N
HEAT_GCN1
Motif
Other DBs
NCBI-GeneID:
121520625
NCBI-ProteinID:
XP_041660107
LinkDB
All DBs
Position
13:complement(30925386..30933685)
Genome browser
AA seq
943 aa
AA seq
DB search
MPLRLDIKRRLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPV
RASKFVARKNWVITGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPYILTSSDD
MLIKLWDWEKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFT
LEGHEKGVNCIDYYSGGDKPYLISGADDRQVKIWDYQNKTCVQTLEGHAQNVSCVSFHPE
LPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVCGLRGSNNVALGYDEGSIIIKVG
REEPAMSMDTNGKIIWAKHSEIQQANLKAMGDAEIKDGERLPLAVKDMGSCEIYPQTIQH
NPNGRFVVVCGDGEYIIYTAMALRNKSFGSAQEFVWAHDSSEYAIRESNSIVKIFKNFKE
KKSFKPDFGAEGIYGGFLLGVRSVNGLAFYDWENTELIRRIEIQPKHIFWSDSGELVCIA
TEESFFILRYMADKVAASQENNEGVTEDGIEDAFEVQGEIQEIVKTGLWVGDCFIYTSSV
NRLNYYVGGEIVTIAHLDRTMYLLGYIPKDDRLYLGDKELNIVSYSLLVSVLEYQTAVMR
RDFGMADKVLPTIPKEQRTRVAHFLEKQGFKQQALAVSTDPEHRFELALQLGELKIAYQL
AVEAESEQKWKQLAELAISKCQFGLAQECLHHAQDYGGLLLLATASGNATMVGKLAEGAE
RDGKNNVAFMTYFLQGKLDQCLELLIRTNRLPEAAFLARTYLPSQVSRVVKLWRENLGKV
NQKAAESLADPTEYENLFPGLREAFAAEHYLRETCLGTTRPATDYPLVTLNEDRNILEEA
QGYEPKGTFIPAVAQTQESEESVAAAPVSAAVMFSQPEPAAPSTVEKEEEEEEEQEEEQE
EIAEVSKSQKDKTLDELEVDLDNMELDDIDTTDVNLDDDFLDD
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atgcctctgaggctggatattaagcggaggctgacagccagatcagaccgagtgaagagt
gtggaccttcacccaacggagccatggatgctagccagcctgtacaacggcagcgtctgt
gtgtggaaccacgaaacacagactcttgtcaagacctttgaagtgtgtgaccttcctgtc
agagcctccaagtttgtggcaaggaagaactgggtcatcactggagcagatgatatgcaa
atccgtgtttttaactacaacaccttggagcgggtccacatgtttgaggcccactcggac
tacatccgctgcattgctgtccatccaacccagccctacatcctgaccagcagtgatgac
atgctgatcaaactatgggactgggagaagaagtggtcgtgcagccaagtgtttgagggt
cacactcactatgtcatgcagattgtcatcaaccccaaggataacaaccagtttgccagc
gcctctctggacagaacaatcaaagtttggcagcttggctcgtcatctccaaatttcact
ttagagggccatgagaaaggagttaactgtatcgattactacagtggaggagacaagccc
tacctcatctcaggggctgatgacagacaagtcaagatctgggactaccagaataagacc
tgtgtgcagactctggagggccatgcccagaatgtctcttgtgtcagctttcacccagag
ctgcccatcatcattactggatcagaggatggcactgtacgtatctggcattcaagcact
taccgcctggagagcaccctgaactacggcatggagagagtgtggtgcgtttgcggtctc
aggggctccaacaatgtggcactgggttatgatgaaggcagcatcattatcaaggtgggt
cgagaggagccagccatgtctatggacactaacggtaaaatcatctgggccaaacacagt
gaaatacagcaagctaacctaaaggccatgggtgatgctgaaatcaaggacggagagagg
ctgccattggctgtcaaagacatgggcagctgtgagatttacccccaaaccatccagcac
aaccctaatggaaggtttgttgtggtgtgtggggatggagagtacatcatctacactgcc
atggctttgaggaacaagagctttggctcagcccaggagtttgtctgggcacatgactca
tctgagtatgccatcagagaaagcaacagtatcgtcaaaatcttcaaaaatttcaaagaa
aagaagtcgttcaaacctgactttggagctgaaggaatatatggaggtttcttgcttgga
gtaaggtcagtgaatggccttgctttttatgactgggaaaacacagagctgatccgccgc
atcgaaatccagcccaaacatatcttctggtcagactcaggtgagctggtgtgcattgct
acagaggagtccttctttattctgcgttacatggcggataaagtggctgcctctcaagaa
aacaatgaaggagtgactgaggatggtatcgaagatgcctttgaggtccaaggagagatc
caggagattgtgaagactggactctgggttggagactgcttcatctacaccagctctgtg
aacaggctcaactactacgtaggaggagagattgtcactattgcccaccttgacagaacc
atgtacctgctgggttacatacccaaagatgaccgcctgtacctgggagacaaggagctc
aacattgtcagctattccctgctggtctctgtcctggagtaccagactgctgtcatgagg
agggattttggaatggctgacaaggtgctacctacaattcctaaagagcagcgaaccagg
gtggcacatttcctggagaaacagggtttcaagcagcaggctctggctgtgtccacagac
ccagaacacaggtttgagctggcattacagcttggggagctgaagattgcttaccaactg
gctgtcgaggcggagtcggagcagaagtggaagcagttggcagagcttgctatcagtaag
tgccagttcggcctggctcaggagtgcctacatcacgcccaggattacggtggcctactg
ctccttgccacagcctctggcaacgccactatggtgggcaagctggctgagggggcagaa
agggacggcaagaacaatgtggccttcatgacctacttcctacagggaaaactggatcaa
tgtttggaactccttatcaggacaaacagactacctgaagcagccttcttggctcgcact
tacctgccaagtcaggtgtcccgcgtggtcaaattgtggagggagaacttggggaaggtt
aaccaaaaggcggctgagtccctagcggacccaacagagtacgagaatctgttcccgggg
ctgagagaagccttcgctgctgagcattacctcagagagacctgcttgggaaccactagg
cctgctacagactatcctcttgtcacacttaatgaagatagaaatattcttgaagaggct
cagggatacgagcctaaaggaaccttcattcctgctgttgcacagacacaagaaagtgag
gagtctgtggcagcagcccctgtttctgcagcggtgatgttttcacagcctgaacctgct
gctccttcaacagtggaaaaagaagaagaggaggaagaagagcaggaggaagaacaggag
gaaatcgctgaagtctcaaaatcacaaaaagataagactctggatgagctggaggtggac
ttggacaacatggagctggatgatatcgatacaacagacgttaacctggacgatgacttt
ctagatgactga
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