Cheilinus undulatus (humphead wrasse): 121520759
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Entry
121520759 CDS
T07473
Symbol
ndc1
Name
(RefSeq) nucleoporin NDC1 isoform X1
KO
K14315
nucleoporin NDC1
Organism
cud
Cheilinus undulatus (humphead wrasse)
Pathway
cud03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cud00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
121520759 (ndc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cud03019
]
121520759 (ndc1)
Messenger RNA biogenesis [BR:
cud03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
121520759 (ndc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ndc1_Nup
Motif
Other DBs
NCBI-GeneID:
121520759
NCBI-ProteinID:
XP_041660300
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Position
LG13
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AA seq
669 aa
AA seq
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MISTQQSSWFIRKVICWRAAASIAWAVLLLPPTTAVFVILSRFSLLHPIHTVSECLSLLM
STSAIFSLILLFGVILMVGFLNLEYYTVIPTIACSKIALLGQLLHPRQFLSSIAHCIMGV
IVGWCCTITVGGRFEALSYSCTQSDGSTRMCLNEYQVFLLLAGAFVGFSHSLLGVIHNMN
YVAFHTVQQYKYLRFKGSLPLVVKCSATQALYSVRNFIVLYYFLGYIPRAWICKTLNLQL
NSSVHQLDSIAGLLDLSLLYHLWISATFLLFTWHITLQLFRIFVTEVYSFPVQSSFTEDS
HQCLPRVLTDRQPMIVKFLALQDLALLSQHSPSRRCEVFSLSQPGGHPHNWNAISKECLS
LLADLTQRLVAYHDTVATNGRAKSLSIGSERKTSSDTSVLSGTDDLMSPRPTLLMKTPAS
VFARSVIGQSQTPLTAPFTPDLDSPFASPALRRLTAPVEQCSPWFGTVQSPHVMRRGPKL
WSTSTDSQVKGSPPPSPASVTSTKPEQSKPSLLAKFLQNRKEQVKNFLAKRVLIMYLFNK
LPEASSQALFADSQAHIWALEGLSYLVQASFSEDQFGVIQTTLPSILSSMLVLQEAVDRH
FKLPHASSKPVRSTISMGDSTYKTLRFALRATLKTAIYRITTTFGTHLNAVQMSTEHRKR
LQQFLEYKE
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atgatttctacacagcaaagtagttggtttatccgcaaggttatctgctggagagctgcg
gccagcattgcttgggctgtcctgttgttgccacccaccacagcagtgtttgtcatcctc
agcagattcagtctccttcaccccattcacacagtatcagaatgtttgtccctcctaatg
agcaccagtgccatcttctccttgatcttgctgtttggagtgatcctcatggtggggttc
ctcaacttggagtattatacagttattccgactattgcatgctcaaagatcgccctattg
ggtcagctgctccaccctcgtcagtttctaagctccattgcacactgcatcatgggagtg
atcgttggttggtgttgtaccatcaccgtcggaggcagatttgaggccctcagctactcc
tgcacacagagtgatggctccactcgcatgtgtctgaacgagtatcaggtcttcctcctg
ctggctggggcctttgttggattctctcacagtctgctgggtgtgatccacaacatgaac
tatgttgcttttcacactgttcagcaatacaaataccttcggtttaagggatccctacct
ctggtggtgaagtgcagtgccactcaagcactttactccgtcagaaacttcatcgttctg
tattacttcttgggatacattccaagagcgtggatttgtaaaacattaaatcttcagttg
aacagttcagtccatcagttggacagtattgcaggactgctggacctctccctgctttac
cacctgtggatcagtgccaccttccttctctttacgtggcacatcacactacaactcttc
aggatctttgtcacagaggtttacagttttcctgtgcagtcatctttcaccgaggattct
caccagtgtctccctagagttcttactgacaggcagccaatgatagttaagttcctagct
ctgcaggatttggctctgctgtctcaacactccccatcacgacgctgtgaggtcttcagt
ctgagtcagccaggtggtcatcctcataactggaacgccatcagcaaggagtgcctgtct
ttgctggctgatctgacccagagactcgtagcctatcatgacactgtggcaaccaacggc
agagccaaatccctgtccattgggagtgagaggaagacctcctctgacacgtcagtgttg
tcaggcacagatgatctgatgagcccgaggcccactctactcatgaaaactccagcgtca
gtctttgcacgctccgtcattggccaatcacagactcctctgacagcccctttcactcct
gacctggacagcccgtttgcttctccggccctgcggcgtcttactgctcccgtggaacaa
tgctcgccgtggttcggcacagtgcagagcccacatgtcatgaggagaggccccaaactc
tggtccacttccacagattcacaggtgaaaggcagtcccccaccctcccctgcctcagta
accagtacaaagcctgaacagtccaaaccgagtctgctggccaagttcctccagaacagg
aaagaacaggttaaaaatttcttggcaaagcgggtgctgattatgtatttgtttaataag
ctcccagaagcctccagtcaggctctgtttgcagacagccaggctcacatctgggcgcta
gaagggctgtcttacctcgtccaagcttctttctctgaggatcagtttggggttatacag
actacattacccagcattctcagttccatgctggttttacaagaggctgtagatcgacac
ttcaagctccctcatgcttcgagtaaaccagtgaggtcaaccatcagcatgggagactcc
acgtataaaacccttcgttttgctctcagggccacgctaaaaacagccatctacaggata
acaacaacatttgggactcacttaaatgctgttcagatgtccacagagcaccggaaaaga
ttgcagcagtttctggaatacaaggaataa
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