Cheilinus undulatus (humphead wrasse): 121521058
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Entry
121521058 CDS
T07473
Symbol
hbs1l
Name
(RefSeq) HBS1-like protein isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
cud
Cheilinus undulatus (humphead wrasse)
Pathway
cud03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cud00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
121521058 (hbs1l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cud03019
]
121521058 (hbs1l)
Messenger RNA biogenesis [BR:
cud03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
121521058 (hbs1l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
HBS1_N
GTP_EFTU_D2
MMR_HSR1
AAA_22
DO-GTPase2
GTP_EFTU_D4
Motif
Other DBs
NCBI-GeneID:
121521058
NCBI-ProteinID:
XP_041660710
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Position
14:23957863..23995824
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AA seq
701 aa
AA seq
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MSRHRNVRGYNYDEDFEDDDMYGQSVEDDYCCISPATANQFIYSRQERHAPREEPLEEEE
YEDEDVPMSPTVSHNLDPLDQAKLYSCLDHMRTVLGDAVPDSVLTQAAIRCGFDPQRALD
AVLSEDTKTAPVTRSTSEEMTSVARVTQEITPLPQRVKRESAAEKAKSRDVSQNKLDSEV
VPKVARMTVSGKKQTMGFDVPSTGENGVVTASVRRVGSPEEATPTSEATTKRPETPSKGS
NGDEPTTVPTPGRSSGKARQSINIKAELEKRQGGKPLLNLVVIGHVDAGKSTLMGHLLYL
LGNVNKRTMHKYEQESKKAGKASFAYAWVLDETGEERDRGVTMDVGMTKFETNSKVVTLM
DAPGHKDFIPNMITGAAQADVAVLVVDASRGEFEAGFEAGGQTREHALLVRSLGVTQLAV
AVNKMDQVNWQQERFQEITSKLGHFLKQAGFKDSDVFYIPTSGLSGENLTTRSSVSELTS
WFSGPSLLEQIDAFKAPQRSVDKPFRLCVSDVFKDQGSGFCVTGKIEAGYIQTGDRILAM
PPNETCTVKGITLHDEALDWAAAGDHVSLTVTGMDIIKINVGCVFCNPKEPIRVCTRFRA
RVLLFNIEVPITQGFPVLLHYQTVSEPATIRKLISVLHKSSGEVLKKKPKCLSKGMNAVV
EIQTQRPVSLELYKDYKELGRFMLRYVGSTIAAGVVTEIKE
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atgtctcggcacagaaatgttcgaggttacaactacgatgaagactttgaagatgatgac
atgtatggccagtctgtggaggatgactactgctgtatatcaccagcaacagcaaaccag
ttcatatattcacgtcaagagaggcatgcaccaagggaggagcctttagaggaggaagaa
tatgaggatgaagatgtaccaatgtctcctactgtcagtcacaatcttgaccctcttgat
caagccaagctgtattcctgcctggaccatatgcggactgtgctgggagatgcagtgcca
gactcggtcctgacccaggcagccatacggtgtggatttgacccacagagggcacttgat
gcagtcctgtctgaagacactaagacagctcctgttaccagaagtactagtgaagagatg
acttcagtagcaagagttactcaggagatcaccccgcttccacaaagagtcaaaagagag
tccgctgcagagaaagctaaaagcagagatgtgtctcagaataagctggactctgaagtt
gtacctaaagtggctcgaatgactgtttctggcaagaagcagaccatgggctttgatgtt
ccaagcacaggggagaatggcgttgtcaccgcctctgtgcgtcgagttggcagcccagag
gaagcaacgccaacctcagaggccaccacgaaacgtcctgagactccatccaaagggtca
aatggagatgaacccaccacggttcccactccagggcggtcctctggaaaggcccgacag
tcgatcaacatcaaggctgaactggagaagaggcagggcggcaaacctctgttaaacctg
gtggttataggtcacgtggatgctggtaaaagcacactgatgggccaccttctttatctg
ctgggcaacgttaataagcgcaccatgcacaaatatgagcaggaatccaagaaggcggga
aaagcttcctttgcttatgcttgggttttggatgaaactggcgaggagagggacagaggt
gtgacaatggatgtgggcatgaccaagtttgagacaaactctaaggtggtgacgttaatg
gatgcaccgggacacaaagacttcatccccaacatgattacaggagctgcacaggctgac
gtggcggtgcttgtggtggatgccagcagaggagagtttgaggctggctttgaggctggc
ggtcagaccagagagcatgctctgttggtgcgctcgcttggtgtcacccagctggctgta
gctgtcaacaagatggaccaggtaaactggcaacaagagcgtttccaagaaattacttcc
aaacttggccactttctcaaacaggctgggtttaaggactctgatgttttttatatccct
accagcggcctgtcaggagagaacctcaccaccaggagttcagtgtctgagctcacctcg
tggttctctggtcctagcctgctggaacagatcgatgccttcaaagcccctcaaaggtcc
gtagacaagcctttcaggctgtgcgtctcagatgtattcaaagaccagggttcaggtttc
tgtgtcacgggaaagattgaggcgggttacattcagacaggagacagaatcctcgccatg
ccaccaaatgagacctgcacggtcaaaggtatcactctgcatgatgaagctctggactgg
gctgcagcaggagaccatgtgagcttgacagtgactggcatggacatcattaagatcaat
gtgggctgtgtgttctgcaatcccaaagagcccatcagagtctgtactcgattcagagcc
agagttctcctctttaacatcgaggtcccaatcacacaaggcttcccagtattgctgcat
taccaaacagtgagtgagcctgccaccattaggaaacttattagtgttttacataagagc
agtggagaagtcctaaagaagaagccaaagtgtttgagtaaaggtatgaatgccgtggtg
gagatccagactcaaaggcctgtttcattagaactatacaaggattacaaggagttaggc
cgcttcatgctgcgatatgtcggctccaccattgctgcaggggttgtcacagagatcaaa
gaatga
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