Cheilinus undulatus (humphead wrasse): 121521306
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Entry
121521306 CDS
T07473
Symbol
nup88
Name
(RefSeq) nucleoporin 88
KO
K14318
nuclear pore complex protein Nup88
Organism
cud
Cheilinus undulatus (humphead wrasse)
Pathway
cud03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cud00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
121521306 (nup88)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cud03019
]
121521306 (nup88)
Messenger RNA biogenesis [BR:
cud03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
121521306 (nup88)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup88
HTH_32
Bcr-Abl_Oligo
Fib_alpha
ADIP
HAUS-augmin3
STX6_10_61_N
Motif
Other DBs
NCBI-GeneID:
121521306
NCBI-ProteinID:
XP_041661134
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All DBs
Position
2:46148171..46152955
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AA seq
754 aa
AA seq
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MVILQNIRQRRRNTLNNCRKNLALSMLFSFKEAGIKMAAFSTERWLDELPNHTIFKKIRE
KLGLEPNLNERGVAKHLTFCLGSDFFVWDDIDRVFYTANLRQLNSDESRSGNHQTLLCIN
PPLFEVGQVLLSPTQHHVALIGKRGVSVLELPQRWGKRSEFEGGRSEINCKTIPVAERFF
TSSPSVNLRQAAWYPSETDEPHLVLLTSDNTIRFYGLKSPQTPAKVLPLSQSEDGSGIHP
PARSYAASLGEIAVAFDFGPISSPPRQLAGLCSKEQLVYPIYILYENGETYLSYTSQTNG
VSLSKPVGPLPMYPAAEDNYGYDACAILCLPCVPSILVIATETGTLYHCVVLESDDEEET
GAVEKWIRGTEAVPALYVFECVELELTLKVATGEDEDPQEFDFTCPIRLHRDPLCPHRYH
CTHEAGVHGVGLIWVNKLQKFLQSGEEDKDSLQELAAEKRCIVEHILCTKPLLTSPSAPV
RGFLIVSDLSLGATMICITSSYECILLPLLSSIRPPSPPLLCSHPGPGSGSSPLRGLADD
SFEQHIRNILARSSTNPFVLKAGDKETSPPPPECLQLLSRATQVFREEYILKQDMAREEM
QRRVKLLTGQKNKQLEEMAVCREERMSLREAAERLADKYEDAKYRQETIMTRVKKVLGSL
QSQLPILSNSEKDMRKELQTISDQLKHLDNSIKQVNMKMEYQKTQVDKDVPAARTTVSLN
AHQKKVVQDVLREQGQQIGDMMKQIKDIKNHFSF
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
atggtgattctgcaaaatatacgacagcgccggcgtaatacgttaaataactgtcgtaaa
aatctcgcgttgtcaatgctgttttccttcaaagaagcggggatcaagatggcggcattc
agcacggagaggtggctggatgagctaccaaaccacactattttcaaaaagatacgagag
aagttgggtttggagcccaacttaaatgagaggggggttgctaaacatctcacgttttgt
ttaggcagtgacttcttcgtgtgggacgacatagaccgcgtgttttacacggccaacttg
cgacagttaaactcggacgagagtcgcagcgggaaccaccagaccttgctgtgtatcaac
cctcctctctttgaagttgggcaggtgttgttgagtccaacgcagcaccatgtcgctctc
atcgggaagaggggtgtctcggtgctggagcttcctcagcggtgggggaaaaggtccgag
ttcgagggcggaaggagcgaaatcaactgtaaaaccatcccggtggctgaacgcttcttc
accagctcaccgtctgtcaatctacggcaggcagcctggtatcccagcgagaccgacgag
ccacacctggttctgctcacatccgacaacaccatcaggttttacggcttgaagtcaccc
cagacaccagccaaagttttgccgctgtcgcagtcagaagatggcagtggcatccaccct
cctgccaggtcctatgcagcgtctctgggggagatagccgtggcttttgactttgggcca
atctcatccccacctcggcagctggcaggattgtgctccaaagaacagctggtctaccct
atttatatcctctacgaaaatggggagacctacctgagctacaccagccagacgaacggg
gtgagtctgagtaaaccagtcggaccactccctatgtatcccgcagcagaggataactat
ggctatgatgcttgtgccattctttgcctgccctgtgttcccagtattctggttattgct
accgaaacgggcacactttaccactgtgtggtgctggagtccgatgatgaggaggagacg
ggggcagtggagaagtggatcagaggaacagaagcagtgccggctctttatgtatttgag
tgtgttgagctcgagctgaccctcaaagtggccacaggagaggacgaggaccctcaagag
tttgatttcacctgcccgatcagactgcaccgagaccctctgtgtccgcacaggtatcac
tgcacacatgaagcaggagtgcatggggtcgggctaatctgggtcaacaagctgcagaag
ttcctccagtcaggcgaggaggataaggacagtctccaggagctggctgcggagaagcgc
tgtattgtagagcacattctttgcaccaaacccctcctaactagtccatcagctccagtt
cgtggctttttgattgtgtctgacctttctttgggtgccaccatgatctgcatcaccagc
agctacgagtgcattttgttgcctttgctgagttccattcgccctccctcccctccactg
ctgtgctcccatccaggtccgggctctggtagctcacctctgcgcggactggctgacgac
tcctttgagcagcacattcgcaatattctggcacgtagctccactaatccctttgtactc
aaggctggtgacaaggaaacgtcacctcctcctccagagtgtctgcaactcctcagcaga
gccacacaggtcttccgtgaggagtacattctaaagcaggacatggcccgtgaagagatg
cagagaagggtaaaacttctgacaggccagaagaacaagcagctggaagagatggcagtg
tgcagggaggagagaatgagcctgagagaggctgcagagaggttggcggacaaatatgaa
gatgcaaagtatcgtcaggaaaccatcatgactagggttaagaaagtgctaggcagcctg
caaagtcaactacccatactgtcaaacagtgagaaggatatgaggaaagagctgcagacc
atcagtgatcagctgaaacacctggacaactccatcaagcaggtgaacatgaagatggag
taccagaagacccaagtggacaaggatgtaccagcagccaggacgacagtctcactgaac
gcccaccagaagaaggtcgttcaggatgtcctcagagaacagggacagcagattggtgac
atgatgaaacagattaaagacatcaaaaaccacttcagtttctaa
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