Cheilinus undulatus (humphead wrasse): 121521876
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Entry
121521876 CDS
T07473
Symbol
prpf39
Name
(RefSeq) pre-mRNA-processing factor 39
KO
K13217
pre-mRNA-processing factor 39
Organism
cud
Cheilinus undulatus (humphead wrasse)
Brite
KEGG Orthology (KO) [BR:
cud00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cud03041
]
121521876 (prpf39)
Spliceosome [BR:
cud03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
121521876 (prpf39)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
Suf
TPR_14
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
TPR_19
TPR_16
TPR_MalT
HrpB1_HrpK
TPR_10
Motif
Other DBs
NCBI-GeneID:
121521876
NCBI-ProteinID:
XP_041661990
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All DBs
Position
14:19367289..19376515
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AA seq
798 aa
AA seq
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MENTGPQLSDDTITGMLDTESPVMESNGDAFLPDLPVLGQAADWSLDQVAPEPLTSILPE
DSDASQDAPEQPQLPEQQMITSGLGAVEKAVEQFQLASAQLFQEEQPPPPPPPPPPQPTE
EPAQPPEHKAESEEAQESSDKIRIESQVAEQDGSQGATEAAQVTEDGMELEESSKDTAGE
ATVPAEPELPSEFEKLFKGCEDNPEDFNGWVYLLQQVEQENILAAVRKAFDAFFLRYPYC
YGYWKKYADIEKKHGNIQVAEEVYRRGLQAIPLSVDLWLHYLTFIKENSDPADPDTEGRI
RAAYEHAVLAAGTDFRSDRLWESFINWETEQAKLANVTAIYDRILGIPTQLYSQHFQRFK
DHVQNNNPKHFLSEEEFVQLRLELSKTSLTPMVSDDSETPIPQEDLPPGTEDLADPAKRV
TEIENMRHKVIEVRQEVFNHNEHEVSKRWTFEEGIKRPYFHVKALEKTQLNNWKEYLEFE
IENGTPERVVVLFERCLIACALYEEFWIKYAKYLEGFSTDGVRHVYKKACTIHLPKKPAI
HLLWAAFEEQQGSADEARAILKSLEAAVPGLAMVRLRRVSLERRHGNLEEAEALLREAME
SGKNSTETSFYAVKLARQQMKVQRSLSKARKVLLDAIEKDQTSPKLYLNLLELEYSGDVT
QNEAEILACFDRALQSPMPLESRLLFSQRKVEFLEDFGSDINVLVAAYEEHKKLQKENEP
SKRKAENGYDSSQEPDAKRQRVDDDPSAAANAVTDTQANNSAYNYNWYQQQYGGWGQNSW
GQYNQYAQYNQYYPPPPT
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatactggcccacaactctcagacgacacaatcactggaatgctggacacagag
tcccctgtcatggaaagcaatggggatgcctttcttcctgatcttccagttctaggccaa
gctgctgactggtcacttgaccaagttgctccagaaccccttaccagcattttgcctgag
gattcagatgcgtcccaggatgctccagagcagccgcagttaccagagcagcagatgatt
actagcgggctgggtgctgtcgagaaagctgtggaacaatttcagcttgccagtgctcag
cttttccaagaggagcagccaccaccacctcctcctccacctccaccacagccaacagag
gagccagcacagcccccagaacacaaggcagagtctgaggaggctcaggaaagcagtgat
aaaataagaatagagtcacaagttgctgaacaagatggcagtcaaggtgcaactgaggct
gcacaggtgacagaagatggcatggagctagaagaatcatccaaggacacagcaggggag
gcgactgttcctgcagaaccagagctgccgagtgagtttgaaaagctcttcaaagggtgc
gaggacaacccagaagacttcaatggatgggtctacctgctgcagcaagtagagcaagag
aatatccttgcagctgtgagaaaagcatttgatgcattcttcttgcgatatccctactgc
tatggctactggaagaagtatgcagatatagagaagaagcatggcaatatacaggttgca
gaggaggtgtacagaagaggtttgcaggccatccctctcagtgtggacctgtggctgcac
tacctcaccttcattaaagagaactcggatcctgctgaccctgacactgagggacgcatc
cgagctgcctatgaacatgctgtgctggcagcaggcacagactttcgctcggaccgtctg
tgggaatccttcatcaactgggagaccgagcaggcaaagctggctaatgtcactgccatt
tatgatcgcatcttgggcatcccaactcagctatattcccagcacttccaaaggttcaaa
gatcatgtgcagaacaacaaccccaaacatttcctgtcagaggaggagtttgttcagctg
aggctcgagctctctaaaaccagcctgacgccgatggtcagcgatgatagcgagacaccc
attcctcaggaggatctgccgcctggtacagaagatcttgcagacccagcaaagagagtt
acggagattgaaaatatgcggcacaaggtgatcgaggtgcgacaggaggttttcaaccac
aatgaacatgaagtcagcaagcgctggacgtttgaagaagggatcaagagaccatacttc
catgtcaaagccttggagaagacgcagctaaacaactggaaggagtacctggagtttgaa
atcgaaaacgggaccccagagcgtgtggttgtgctttttgaacgctgcctcatcgcctgc
gcactctacgaggagttctggatcaagtatgcaaaatatctagagggcttcagcactgac
ggtgtgagacatgtctacaagaaggcgtgcaccatccatctgcccaagaaaccagccatc
cacctgctgtgggctgcctttgaggagcaacaaggaagcgcagatgaggcccgtgccatc
ttgaagtccctggaagcagcagtccccggtctggccatggtgcgtcttcggagggtcagc
cttgagcgtcgccatggaaacttggaggaagcagaagcccttttacgggaggcgatggag
tctgggaagaattctacagagacatcgttttatgctgtgaagctggccaggcagcaaatg
aaggtccagaggagtctgagcaaggccaggaaggtgctactggatgcaattgaaaaagat
cagacgagtccaaagctgtatctgaacctgctggagctggaatacagtggggacgtgaca
cagaacgaggctgagatcttggcttgttttgacagagccctgcagagccccatgcctctt
gaatcccgcctccttttcagccagcgcaaagtcgagttccttgaggactttggcagcgac
atcaatgtgcttgtggctgcatacgaggaacataagaaactacagaaagaaaatgaaccc
tcaaagaggaaggcagaaaacgggtatgacagctcccaggaaccagacgccaagagacag
cgtgtggatgatgacccttcagctgcagcgaacgcagtgacggacacacaagctaacaac
tctgcatacaactacaactggtaccagcaacagtacggcggttggggacaaaactcatgg
gggcagtacaaccaatatgcccagtataaccagtactacccccctcctcctacataa
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