Cheilinus undulatus (humphead wrasse): 121521945
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Entry
121521945 CDS
T07473
Symbol
ddx1
Name
(RefSeq) ATP-dependent RNA helicase DDX1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
cud
Cheilinus undulatus (humphead wrasse)
Brite
KEGG Orthology (KO) [BR:
cud00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cud03041
]
121521945 (ddx1)
03016 Transfer RNA biogenesis [BR:
cud03016
]
121521945 (ddx1)
Enzymes [BR:
cud01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
121521945 (ddx1)
Spliceosome [BR:
cud03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
121521945 (ddx1)
Transfer RNA biogenesis [BR:
cud03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
121521945 (ddx1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
SPRY
Helicase_C
ResIII
CMS1
DUF5766
Motif
Other DBs
NCBI-GeneID:
121521945
NCBI-ProteinID:
XP_041662093
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Position
LG14
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AA seq
740 aa
AA seq
DB search
MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV
IQIVYETLKDQQEGKKGRASIKTGGAIFNNWQMNPYDRSTAFAIGPDGLCCQSREFKEWH
GCRSTKGVTKGKYYYEVTCHDQGLCRIGWATSQAALDLGTDKYGFGFGGTGKKSNNKQFD
SYGEEFTMHDTIGCYLDLEKGQISFSKNGNDLGLAFEIPQHVKNQAFFASCVLKNAELKF
NFGGESFKNPPKSGFVALDQAQEGHTVKSTQTGSAKVSQVKASSNAPKALIIEPSKELAE
QTLNNVKQFKKYVDNPKLRELLVIGGVAAKEQLAALEQGIDIVVGTPGRLDDLISTGKLS
LSQVRFLVLDECDGLLSAGYTDFINRIHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSE
RIMHFPTWVDLKGEDSVPETVHHVVVPVNPKSDRLWERLGKSHIRTDEVHAKDNTRPGAN
SSEMWSEAIKVLKGEYTVRAIKEHKMDMAIIFCRTKIDCDNMEQYFIQQGGGPDSKGHQF
SCVCLHGDRKPNERKNNLERFKRKEVRLLICTDVAARGIDIHGVPYVINVTLPDEKQNYV
HRIGRVGRAERMGLAISLVAMEKEKVWYHVCPNRGRGCYNTRLKEDGGCTIWYNEKELLS
DIEEHLKCTITQCEPDIKVPVDDFDGKVTYGQRRTLGGGNYKGHVDVLAPTVQELANLER
EAQSSFLHLGYMPNQLFRAF
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgttttctgaaatgggggttatgcctgaaattgcgcaggctgtggaggagatg
gactggctgctcccaactgacatccaggctgagtctatccctcttatcctgggtggagga
gatgttctcatggcagctgaaactggcagtggcaaaactggtgctttcagtatcccagtg
attcagattgtttacgagaccctgaaggatcagcaggagggcaagaaaggaagagcttct
atcaagactggcggagctattttcaacaactggcagatgaacccttatgaccgcagtaca
gcatttgcaatcggtcctgatggattgtgctgccagagcagagagttcaaagagtggcat
ggctgtcgctccacaaaaggtgtcaccaaaggaaagtactactatgaagtgacctgccat
gaccagggactgtgtcgtattggctgggccaccagtcaggcagcgctggatttaggaact
gataagtatggatttggttttggtggaactggaaagaaatccaacaacaagcagtttgac
agctatggagaggagtttaccatgcatgacaccattggatgctatctggatctagaaaaa
ggacaaatttccttctctaaaaatggtaatgacttgggtttggcatttgagattccccaa
catgtgaagaatcaagctttctttgcctcctgtgtgctcaagaacgcagagctcaagttc
aactttggaggagaatcatttaaaaatccccctaaaagtggttttgttgctctggatcag
gcacaagaaggacacacagtcaaatccactcaaacaggcagtgccaaagtgagtcaggtg
aaggcatcatccaatgcacccaaagcactgatcatcgaaccatcaaaagaactggctgaa
caaaccctcaacaacgtcaagcagtttaagaaatatgtggataaccccaaactgagggag
ctgctggtgatcggtggtgtggctgccaaagagcagctggctgctctagagcaggggatt
gacattgttgtgggaacacccggcagattggacgatctcatctctactgggaaactgagt
ctctcccaagtccgctttctagttctggatgagtgtgatggccttctgtctgcaggttac
actgacttcatcaacaggatccataaccaaatccctcaggtcacctctgatggcaagaga
ctgcaagtgattgtttgttcagccacactgcattcattcgatgtgaagaagctgtcagag
cggatcatgcactttcccacttgggtggatctgaagggggaggattctgtgcctgagacg
gtccaccatgtggtggtgccagttaaccccaagagcgatcgcctttgggagcgtttaggc
aagagccacatacgaactgatgaagtccatgctaaagacaacaccagacctggagccaat
tcttctgaaatgtggtcagaggccatcaaggtgctgaagggcgagtacacagtcagggcc
atcaaggagcacaagatggatatggccatcattttctgtcgcaccaagatcgactgtgac
aacatggagcaatacttcattcagcaaggaggaggtccagacagtaaaggccaccagttt
tcttgtgtttgtctccatggggatcgcaagccaaatgagcggaaaaataatctggagcgc
ttcaagaggaaagaagtgagactcctgatctgtacagatgtagcagccagaggaattgac
atccacggagttccttatgtgattaacgtcaccctgcctgatgagaaacagaactatgtc
catcgtatcggcagagttggcagagcagagagaatgggactggccatctcccttgttgct
atggagaaagaaaaggtttggtatcatgtttgcccaaaccgaggcagaggctgctacaac
acccggctgaaggaggatggaggctgcaccatctggtacaacgagaaagagctcctgtct
gacattgaagagcacctgaagtgcaccatcactcagtgtgagcctgacatcaaagtacct
gtggatgattttgatggaaaggtcacctatggtcagcgtaggacactgggaggtgggaac
tacaaaggtcatgtggatgttctggccccgacagtccaggagctggcaaaccttgagagg
gaggctcaaagttccttccttcacctgggatacatgccaaatcagcttttcagagctttc
taa
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