Cheilinus undulatus (humphead wrasse): 121522122
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Entry
121522122 CDS
T07473
Symbol
itgb5
Name
(RefSeq) integrin beta-5
KO
K06588
integrin beta 5
Organism
cud
Cheilinus undulatus (humphead wrasse)
Pathway
cud04145
Phagosome
cud04148
Efferocytosis
cud04510
Focal adhesion
cud04512
ECM-receptor interaction
cud04810
Regulation of actin cytoskeleton
cud04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cud00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
121522122 (itgb5)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
121522122 (itgb5)
04148 Efferocytosis
121522122 (itgb5)
09144 Cellular community - eukaryotes
04510 Focal adhesion
121522122 (itgb5)
09142 Cell motility
04820 Cytoskeleton in muscle cells
121522122 (itgb5)
04810 Regulation of actin cytoskeleton
121522122 (itgb5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cud04131
]
121522122 (itgb5)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cud04515
]
121522122 (itgb5)
Membrane trafficking [BR:
cud04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
121522122 (itgb5)
Cell adhesion molecules [BR:
cud04515
]
Integrins
Integrin beta subunits
121522122 (itgb5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_B_tail
EGF_integrin
PSI_integrin
Integrin_b_cyt
I-EGF_1
EGF_2
vWA_SIBA-E
EGF_Teneurin
EGF_TEN
Motif
Other DBs
NCBI-GeneID:
121522122
NCBI-ProteinID:
XP_041662159
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Position
15:24666498..24751041
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AA seq
799 aa
AA seq
DB search
MWMWRAALCCLLLESLLLHTARGLNMCMSGSATSCEECLLIHPSCAWCAQEDFGKGRTLT
SRCDFLQNLEKRGCGPQFIEYPRSSVSILQSMPLSLKGSGSTQHNVVQIMPQKISVSLRP
GEQTWFGLQVRQVEDYPVDLYYLMDLSLSMKDDLDTIRNLGTKLALEMGKLTSNFRLGFG
TFVDKNMSPFSYTAPKYQENPCNGYKLFPNCVPTFGFRHILSLTDKVDRFNEEVQKQMVS
RNRDAPEGGFDAILQAAVCKTEIGWRKEAYHLLVFATDDVPHLALDGRLGGLVKPHDGMC
HLNTQNEYSASTEMDYPSLALLGEKLAENNIFLIFAVTKRLYVIYKNFTALIPGTTVEIL
DQDSKNVIQLIVNAYNNIRSKVELSVWDHPEDISLSFTATCQDGKPLPGLRKCADLKIGE
TVSFNVSVEARSCPPRGTDQSFTIKPVGFKDRLEVSVDYRCDCDCSKTAQTNSSICSSIG
TYNCGTCHCEPGYLGARCECQEGEVSSMYLSACREAEGKQICSGRGECSCNQCLCFESEF
GKIYGSYCECDDFSCARHKGILCSGHGECHCGECKCHAGFIGDNCNCSTETSTCISDDGQ
MCSGRGNCVCGRCQCTEPGAFGDTCEKCPTCPDACGTKRECIECRLFNSGRLADNQTCQR
LCKDEIVTVETLRTDDTNAVLCLYKTDSDCVMKFTYSEHASGRSILTALKEPECGGGPDA
MMVLLAVVGSILLVGVILLAVWKLVITIHDRREFARFQSARSRARYEMASNPLYKQPVST
HFVETDFNMYGKSYNGGVH
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atgtggatgtggagagccgctttgtgctgcctgcttctggaatcactgctgctgcacaca
gccagaggtctcaacatgtgcatgagtggtagtgcaacgtcctgtgaagaatgcctcctg
attcaccccagttgcgcctggtgtgcacaagaggatttcgggaaaggtcggactctgacg
tcgaggtgtgattttctacaaaaccttgaaaaaagaggctgtgggccacagttcatcgag
taccccagaagcagtgtttctattctgcagagcatgccgctaagtctgaaaggttctggg
tcaactcaacataacgtggtccagattatgccccagaagatctctgtcagcctgcggcct
ggagagcagacgtggtttgggctgcaggttcggcaggtggaggactatcctgtggatctt
tactacctgatggatctgtctttgtccatgaaagatgatctggacaccatccgtaacctt
ggcactaagctggctctggagatggggaagctcaccagcaacttcagactcggctttggt
acctttgtggacaaaaacatgtcaccgttctcctacacagcacctaagtatcaggagaac
ccctgcaatggatacaaactgtttcctaactgcgtccccacctttggtttccgtcacatc
ctctctctgacggacaaagtcgaccgtttcaacgaggaggtgcagaagcagatggtgtcc
cgcaaccgggacgcacctgagggcgggtttgacgccatcctacaggctgctgtttgtaag
acggagattggatggaggaaggaggcgtaccacctgctggtgttcgccaccgatgatgtt
cctcacctcgctttggacggccgactcggaggcctcgtcaagccacacgatgggatgtgt
cacctaaacacacagaacgagtacagcgcctccacagagatggactacccatcactggct
cttctgggagagaaactggcagagaacaacatattcctgatctttgcagtgacaaaacgc
ctctatgtcatttataagaattttacagccctcatacctggaactacagttgaaatcctg
gaccaggactcaaagaacgtgatccagctgatcgtcaatgcttacaacaacatccgctct
aaagtggagctgtcggtgtgggatcacccagaggacatcagtctttccttcaccgccacc
tgccaggatggaaagccgctacccggcctcaggaagtgtgccgacctgaagatcggggaa
acagtgtcgtttaatgtgagcgtggaggcgaggagctgccctcccagaggcaccgatcag
agtttcaccatcaaaccagtgggctttaaagaccgcctggaggtgtcggtggattatcgg
tgtgactgcgactgcagcaagacggcacagaccaacagcagcatctgcagctccattggt
acatataactgcgggacgtgtcactgcgagccgggctacctgggcgcccgctgcgagtgc
caggagggcgaggtcagcagcatgtatctgagcgcctgcagggaggctgagggcaagcag
atatgcagcgggagaggagagtgcagctgcaaccaatgtctctgcttcgagtctgagttc
gggaagatctacgggagctactgcgagtgtgatgacttctcctgcgcccgacataaaggc
atcctctgctcaggtcatggagaatgtcactgtggggagtgtaaatgccatgctgggttc
atcggagacaactgtaactgctccactgagacgtccacgtgtatctcagatgatgggcag
atgtgcagcggacgaggaaactgcgtatgtggacgatgtcaatgcactgaacccggagct
tttggagatacttgtgagaaatgtcccacctgtcctgatgcctgtggcactaaaagggaa
tgtatcgaatgtcgactcttcaactcaggacgcctcgcagacaaccagacctgccagcgc
ctgtgcaaggatgaaatcgtcacagtggagaccctcagaacggatgacaccaacgctgtg
ctttgtctctacaagacggacagcgattgtgtgatgaagttcacgtattctgagcacgcc
agtggccggtccatcctcactgctctcaaagagccagagtgcggtggcggtcctgatgcc
atgatggtgctgttagcggtggtcggcagcatcctgctggtcggagtcatcctgctcgct
gtgtggaagttggtcatcaccatccatgaccggcgagagtttgcacgcttccagagcgca
cgatcacgagctcgatacgagatggcctccaaccctctgtacaaacagcccgtctctacc
cactttgtggaaacagacttcaacatgtacggcaagtcgtacaatggaggggtccactga
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integrated database retrieval system