KEGG   Cheilinus undulatus (humphead wrasse): 121522138
Entry
121522138         CDS       T07473                                 
Symbol
col4a1
Name
(RefSeq) collagen alpha-1(IV) chain
  KO
K06237  collagen type IV alpha
Organism
cud  Cheilinus undulatus (humphead wrasse)
Pathway
cud04510  Focal adhesion
cud04512  ECM-receptor interaction
cud04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:cud00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    121522138 (col4a1)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    121522138 (col4a1)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    121522138 (col4a1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cud04147]
    121522138 (col4a1)
   00536 Glycosaminoglycan binding proteins [BR:cud00536]
    121522138 (col4a1)
Exosome [BR:cud04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   121522138 (col4a1)
Glycosaminoglycan binding proteins [BR:cud00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   121522138 (col4a1)
SSDB
Motif
Pfam: Collagen C4
Other DBs
NCBI-GeneID: 121522138
NCBI-ProteinID: XP_041662189
LinkDB
Position
15:37823066..37892293
AA seq 1634 aa
MMLPCGTLLLLVALYSSLDLTEAEGCGESCGKCDCSGVKGAKGERGFPGLQGNMGFPGMQ
GPEGPPGAMGFKGDAGEHGAPGLKGVRGPPGLPGFPGNPGLPGINGNDGPPGLPGIPGCN
GTKGDRGRDGIPGFAGTQGPLGPPGVPGMKGDPGGVIGIIPLKGDRGFPGTPGLPGSNGL
TGPIGPPGPRGYPGPKGDPGPPGPPGEKGDKLAFVSEKGEKGERGYRGPPGPPGRPEEFE
GGTTVYLPGPQGDKGLKGDKGYCDPGQTGVKGELGPPGPPGKPGKDGEDGLKGEKGFPGS
PGYGGSPGEKGERGPPGHGGGAPGRPGPRGLPGPKGDKGFPGPQGDAGPPGRHIEGPRGE
TGEKGTVGEKGDRGVEGESLVGPPGQPGAPGPPGPPGPLDGICDMEKGAPGPAGPPGLQG
ELGQKGDKGDTCLQCEDFGRPGSPGLQGPKGDQGPPGQIGSKGDKGRPGSPGEPGRPGSH
GTPGLMGAPGAVGEPGDVFVAPGLKGDKGLPGFAGSPGRPGLDGQPGRDGSPGLPGLKGE
PAKEGIKGERGPQGDPGRPGITGERGPPGLPGYGRPGEPGEKGSQGRPGHPGSPGAPGAK
GEPGQSESIPGPRGEPGPRGETGRPGIQGNRGLPGDQGLPGFPGSKGDQGSPGIGFPGPT
GPKGISGIPGAPGLPGEPGRPGVDGSTGQPGSPGQKGEPGRGLPGPKGLQGQPGITGFPG
EKGNIGLPGVPGREGLTGPPGAQGIKGEVGPPGLPGLIGQPGPPGKGSPGAPGPQGPPGE
PGPFGRGGEKGEKGYPGPPGLDMPGPQGEKGPPGFPGTPGIKGLPGPPGLPGRDGLIGNQ
GPKGEMGVIGTPGVPGFPGPPGTPGSPGLRGDPGITGPRGGQGGAGPKGERGEPGLQGPP
GNMTEYDMEHMKGEKGDTGDRGDPGYTGQKGHRGLPGDPGLPGKDGEPGLPGQPGQKGDP
GVPGEPGSMGPPGHKGGVGEMGVPGPVGPKGTKGDYGTPGHPGFRGTDGSKGDKGTAGDP
GIGIPGYPGEKGQTGQPGFPGSPGEKGLRGQEGMPGKPGLQGSKGEKGTTGYPGQPGRPG
EKGTPGLPGSAGEPGRDGRPGEAGLQGPPGPPGEKGEPGVDGIPGFTGERGEPGIPGRGF
TGPPGSLGIKGDKGSPGFPGTPGHPGVPGIKGDKGLPGPQGNQGEQGERGLPGNSLEGPK
GERGETGQPGEAGSQGAPGHPGVPGRDGLKGEKGNQGNPGFQGEAGHKGDPGVPGLPGQP
GLPGIDGQKGEQGLQGVHGFPGTKGDSGEIGFKGEVGDRGFPGVKGNVGPPGPPGPSIFI
KGDIGFPGTQGLPGPQGPSGFPGLKGQQGLIGSPGPKGDDGLPGYNGRPGAKGEPGLQGP
QGPRGHPGPPGPDGVPGQVGPPGPSSMEHGFLVTRHSQSEEVPYCPEGTSLIYDGYSLLY
VQGNERAHGQDLGTAGSCLRKFSPMPFLFCNINNVCNFASRNDYSYWLTSPEPMPMSMAP
ITGESIKPFISRCAVCEAPAMVIAVHSQTIMIPSCPQGWDSLWIGYSFVMHTSAGAEGSG
QALASPGSCLEEFRSAPFIECHGRGTCNYYANSYSFWLATIEDSEMFTKPVPTTLKAGDL
RTHISRCQVCMKRT
NT seq 4905 nt   +upstreamnt  +downstreamnt
atgatgttgccgtgcggcacgctgttgctactggtggctctgtactccagcttagacctg
acagaggctgagggttgcggagaatcttgtggaaaatgtgactgcagtggtgtaaaaggc
gcaaagggtgaacgtggatttccaggtcttcaaggtaacatgggattcccagggatgcag
ggacctgaggggcctccaggggcgatgggcttcaagggcgatgcaggtgaacatggagct
cctgggctaaaaggagtgcggggtcctccaggtctgcccggtttcccaggaaacccagga
ctgccaggcatcaatggaaatgacggcccacctggtctgccaggtatcccaggatgcaac
gggactaaaggagacagaggaagagatggtattccggggtttgctggtactcaaggacct
cttggcccccctggagtccctggaatgaagggagaccctggtggtgtgattgggattatt
ccccttaaaggagacagaggcttccctggcacacctggattacctggatcaaatggactt
actggaccaattggaccaccaggacctcgtggctatcccggacccaaaggtgatcctggc
ccccctggcccccctggagagaagggtgacaagctggcctttgtgagtgagaaaggcgag
aagggtgagagagggtatcgtggcccccctggtccacctgggcgcccagaagaatttgaa
ggaggcaccactgtgtacttgccaggaccacaaggtgacaaaggactaaaaggagacaaa
ggctactgtgacccaggtcagacaggcgttaaaggtgaactcggcccaccaggaccaccg
ggtaaacctggcaaggatggagaagatgggctgaagggagaaaaaggctttcctggttct
cctggctacggtggttcccctggtgaaaaaggagaaagaggaccaccaggtcatgggggc
ggtgctccgggccgtccaggtcctcgtggtctcccagggcctaaaggagacaaaggtttt
cctggtccacagggagatgccggcccaccaggccgtcacattgaagggcctcgaggagag
acgggtgagaagggaaccgtcggagagaaaggagacaggggtgtagaaggagagtctttg
gtcggtcccccaggtcaaccaggtgcccctggaccccctggaccccctggaccactagac
ggtatatgtgacatggagaaaggagctcctggtccagctggacctccagggttacagggt
gaattgggacagaaaggtgacaaaggagacacctgtcttcaatgtgaagattttggccga
cctggatcacctggccttcagggtcctaaaggagatcaaggacctcctgggcaaataggc
agcaagggagacaaaggtagacctggttcacctggagaacccggaagacctggctctcac
ggtacccctgggttgatgggagctcctggtgctgttggtgagccgggagatgtttttgta
gctcctggtctgaagggggacaaaggtctgcctggttttgccggttcacccggacggcct
ggactggatggacagccagggagggatgggtcacccggtttacctggcctcaaaggagaa
cctgccaaagagggcattaaaggtgaacgtggaccacaaggagatcctggtcgccctggg
attacaggagagaggggtccacctggactgccaggctatggtcgaccaggagagcctgga
gagaagggcagtcagggtagaccaggccaccctggatcaccaggagcacctggtgctaaa
ggagagccaggtcaaagtgagagcattcctggacctcgaggagaacctggacctcgagga
gaaactggcagacctggaattcaaggcaacagaggcctgcctggagaccaagggctgcca
ggttttcctgggtctaaaggtgaccaaggaagtcctggtattggttttcctggtccaact
ggtcccaaaggaattagtggaattccgggcgctccaggattaccaggagagccaggaaga
ccaggggtggatggctcgacaggacaacctggttcacctggacaaaaaggtgaacctgga
agaggtcttccaggaccaaaaggtcttcagggccaaccaggaattactggcttcccaggc
gagaaaggaaacattggcttacctggtgttcctggacgagaaggcctgacaggacctcca
ggtgctcagggaatcaaaggtgaagtgggaccaccagggcttccaggactaattggccaa
ccaggtcctccaggaaaaggttcccccggtgctcctggaccacaaggaccacctggagag
ccagggccattcggtcggggaggcgaaaagggagaaaaaggatacccaggtcctcctggt
ctggacatgccaggacctcagggagagaagggcccccctggcttcccaggcacaccagga
attaaaggactgccagggccaccaggtttacctggcagagatgggctgattggaaaccaa
ggtcccaaaggtgaaatgggagtcattggtacacctggtgtaccaggatttccaggacca
cctggtacaccaggatctcctggtcttagaggtgatcctggtattactgggccaagaggt
ggccaagggggggctggacctaaaggagaaagaggagagccaggtcttcaaggtcctccc
ggaaacatgacagagtatgatatggagcacatgaagggagagaagggagacactggagat
agaggtgatcctggatacacagggcagaagggccaccgtggacttcctggagaccctgga
ctgccaggcaaagatggagaacctggactacctggacaaccaggtcagaaaggagaccct
ggtgttcctggagaacctggcagtatgggaccacctggtcataaaggtggtgtaggagag
atgggggtaccaggtcctgttggtccaaagggtactaaaggagactatggcacacctgga
catcctggattcagaggcactgatggatcaaaaggagacaagggaacagcaggtgaccca
ggtattgggatcccaggatatccaggagaaaagggccagacaggccagcctggcttccca
ggatctcctggagagaagggtctgaggggtcaggaggggatgcccggaaagcccggactg
cagggatccaaaggagaaaaaggaaccactgggtatccaggtcagcctggtagacctggt
gagaagggtacacctggtctaccaggatcggcaggagaacctggacgtgatggtcgacct
ggtgaggctggcttgcagggacctcctggaccacctggagagaagggagaacctggagtg
gatggtatccctggattcacaggggagagaggagagccaggtatacctggtcgtggtttc
actgggccccctggttctcttggtatcaaaggtgataaaggcagtcccggcttccccggc
actcccggtcaccctggcgtccctggtatcaaaggtgataaaggactaccaggcccacag
ggaaaccagggtgagcaaggagagaggggtctcccaggtaactccctagagggacccaag
ggggagaggggagaaacaggacaacctggagaagcaggatcccaaggagcaccgggacac
cctggtgtgccaggcagagatggactaaaaggggagaaaggaaaccagggaaacccaggc
ttccagggagaggcgggacacaagggtgacccaggagtacctggtctgcctggacagcct
ggccttccaggtatcgacggacagaagggtgagcagggactgcagggtgtccacggcttt
ccaggtacaaagggagatagtggtgaaattggattcaaaggagaagttggagacagagga
ttcccaggagtcaagggtaatgtaggcccacctggcccccctggcccctctatcttcatc
aagggagacattgggttcccaggaactcaaggcttaccaggacctcaaggacccagtggg
ttccctggactgaaaggacaacaaggactgataggatccccagggccaaaaggtgatgat
ggacttcctggatataacggccggcctggagccaaaggagagcctggtctgcagggccca
cagggaccaagaggacaccccggccccccaggacctgatggtgttccaggtcaagtcggc
ccacctggcccctcctccatggagcatggtttcctggtaacccgtcatagtcaatcagag
gaggttccttattgtccagagggaacatcgctcatatatgatggctactccttgctttat
gtgcaaggaaatgagcgggctcatggacaggacttaggtacagcaggaagctgtctaagg
aagttcagcccaatgccattcctgttctgtaacatcaacaacgtgtgcaactttgcctcc
cgcaatgactactcgtactggcttacttcccctgagccgatgcctatgagcatggcacct
atcactggtgaaagcatcaaacctttcatcagcaggtgtgctgtttgtgaagctccagcc
atggtgatagcggttcacagtcagaccattatgatcccatcatgccctcagggctgggac
tctctgtggatcggctactcctttgtcatgcacaccagtgcaggtgctgagggttcaggc
caggctctggcctctcctggatcctgtctggaggagttccgcagtgccccgttcatcgag
tgtcacggtcgtggaacctgcaattattacgctaactcctacagcttctggctcgccacc
attgaagatagtgagatgttcacgaaacctgtcccaacaacactaaaagcaggagatctc
cgaacacacataagccgctgtcaagtgtgtatgaagaggacataa

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