Cheilinus undulatus (humphead wrasse): 121522214
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Entry
121522214 CDS
T07473
Symbol
dhx36
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36 isoform X1
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
cud
Cheilinus undulatus (humphead wrasse)
Pathway
cud03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cud00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
121522214 (dhx36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cud03019
]
121522214 (dhx36)
03012 Translation factors [BR:
cud03012
]
121522214 (dhx36)
Enzymes [BR:
cud01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
121522214 (dhx36)
Messenger RNA biogenesis [BR:
cud03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
121522214 (dhx36)
Translation factors [BR:
cud03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
121522214 (dhx36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
DEAD
HA2_C
HA2_N
AAA_22
nSTAND3
ATPase
NB-ARC
AAA_19
NPHP3_N
DUF2011
Motif
Other DBs
NCBI-GeneID:
121522214
NCBI-ProteinID:
XP_041662302
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All DBs
Position
2:35730916..35776299
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AA seq
1134 aa
AA seq
DB search
MVRLLFKKQSLNLSSCSVANSGRSLLTSLSLTGFDSPTDKFLLPFICFYLCLLSESSMSY
AYGGGGGRRGRRGGRGHRDGSRERWERGGRGGWRNNSSDFNPDRGGGGGGGQKERPPPHL
KGREIGLWYARYGAVRRKQADRRSRAVVQMDEAREQHITRLLNSVQNDQHGQGRDSRDAV
ASSSSNWQTTPSSSSGHCYFDGDVPEEEKLKIEIKSEEEEEEIAEGQRTATFRGQRYFSH
AVTKDEPPDNWDDEEQQQAVKEEKKILKKEDKDLEFLFQDVVRDNSLDHCLIEDLKRKMS
DPKYKDMLKFREKLPSYGKKEELVKLINSNRVLVVSGETGCGKTTQVTQFILDDHIKRGM
GSMCRVVCTQPRRISAISVAERVSAERAECVGNGNSCGYQIRLQRELPRRQGSILYCTTG
IILQWLRSDPLLSSISHLVLDEIHERNLQSDVLLIIVKDLLSLREDLKVVLMSATLNAEK
FSRYFDNCPMIHIPGLTFPVEEFLLEDVLEMTGYRPQTKDHRPAWKRRFWQGHSSRPEKE
EKELEYQESWPAYEHTLQCRYSESTIRAVEMLDNDDKIDLGLIVALIRHIVLNDEEGAIL
VFLPGWDNISSLNDLLMAERMFQSDQFVIIPLHSLMPTVNQTQVFKKPPPGVRKIVIATN
IAETSITIDDVVYVIDGGKIKETNFDTNNNIKTMAAEWVSLANAKQRKGRAGRVCPGKCY
HLYNGLRASLLDAYQLPEIMRTPLEELCLQIKILKLGSIARFLAKALDPPTEMGVLLAIK
NLKDLNALDYEENLTALGFHLAHLPVEPHIGKLILFGALLGCLNPVLTIAASLSFKDPFF
IPLGKEKMADMKRKVLSRNSKSDHLTIVNAFQGWEEAKRRGARCERDYCWDNFLSANTLQ
MLHNMKGQFAEHLMHAGFVSSSNPKDPKSNVNSDNNKLIKAVIVAGLYPKVAMIKPSHSK
KRPGAKVYTQADGKVCIHPKSVNAEETEFNYTWLIYHLKMRTSSIFLYDCTEVSPFSLLF
FGGNITIQKDQDQETVAVDEWIVFRSPARIAHLVKSLKTELDSLLEEKIRNPAPVDWQNR
QSKDCAVITAIIDLITTQEKPSGGTKGYDRPWASAPRGQHSYFNDDDADDDDDY
NT seq
3405 nt
NT seq
+upstream
nt +downstream
nt
atggtaaggctcttgttcaaaaagcagtctcttaatctgtcatcttgtagcgtagcaaac
tcagggagaagcttactaacaagcctcagtcttaccggctttgacagtcccacggacaag
tttttacttccttttatttgtttttatctctgtttgctctctgaaagcagtatgagttac
gcttatggtggcggaggcgggaggagagggagaagaggcggacgagggcacagagatgga
agtagagaaagatgggagagaggcggtagaggaggatggagaaataacagctccgacttt
aacccagaccgaggaggaggaggaggaggaggacaaaaggagcgtcctcctccgcacctg
aagggccgggagattgggctgtggtacgcccgatatggagccgtgaggaggaaacaggct
gaccggagatcgagggcggtggtacagatggatgaagcaagagagcagcacataaccagg
ctgctaaactccgtccagaatgatcagcatggtcaagggagagatagcagagatgcagta
gcttcttcttcgagcaactggcagactactcccagcagtagtagtggtcattgttacttt
gacggggatgtacctgaagaggaaaaactaaagattgagatcaaatctgaagaagaggag
gaagaaattgctgaaggccagaggacagccactttcagaggacaacggtacttctcccat
gcagttactaaagatgaacctccagataattgggatgatgaagagcagcagcaggcagtc
aaggaggagaaaaagatactgaaaaaagaagataaggacctggagttcttatttcaggat
gtagtcagagacaattctttagaccactgccttatagaggatttaaagaggaagatgtca
gatccaaagtacaaagacatgttgaaattcagagaaaaacttccatcttatgggaaaaaa
gaggagctggtgaagctgatcaattcaaaccgtgtcctggtggtgagtggggaaacaggg
tgcggaaagacaactcaggtcactcagttcatccttgacgatcatataaaaagaggaatg
ggctcaatgtgtcgtgtggtctgcacacagcctcgtcgcatcagtgccatctcggtagca
gagcgagtgtctgcagagagggcagaatgtgtaggaaatggaaactcttgtggataccaa
atccgtttgcagagagagttaccacggagacaaggttcaatcctgtactgtacaacagga
attattcttcagtggcttcgctcagacccattattgtccagtatcagccacctggtgctg
gacgagatccatgagagaaacctgcaatctgatgtgctgctcatcattgtgaaagaccta
ctcagcctgagagaagacctgaaggtggttctcatgagtgccactctcaacgcagagaag
ttttctagatattttgacaactgtccaatgatccacatccctggcttgacgttccctgtg
gaagagttcctactggaggatgttttggagatgactgggtaccggcctcagacaaaggac
catcgcccagcgtggaagagacgcttctggcaggggcacagctcaagacctgaaaaggag
gagaaggagcttgaatatcaggagagctggccagcttatgaacacacattgcagtgcaga
tactctgagagcaccattcgtgctgtggagatgttggacaatgatgataaaatcgacctg
ggactgattgtggcgctaattcgtcatattgtgctcaatgatgaggaaggagcaatcttg
gtcttcctgcctggctgggacaacatcagcagtctaaatgacctgctcatggctgagcgg
atgttccaatcagaccagttcgttatcatccctctgcactccctcatgccaaccgttaat
cagacgcaggtgttcaaaaagcctcctccaggtgttagaaagattgtgattgctaccaat
atagctgagaccagcatcaccatcgatgacgttgtctatgtgatagacggaggcaagatt
aaggagaccaactttgataccaacaacaacatcaaaaccatggcggcagagtgggtgagc
cttgccaacgccaaacagaggaaaggacgtgccggcagagtgtgtccagggaagtgctat
catctttacaatggactgagggccagcctgctggatgcctatcaattacctgaaattatg
aggacgccactggaggagctctgtctgcagatcaagatattgaagctcggctccatagct
cgattcttggcaaaagccctcgaccctcccactgagatgggagtacttcttgccatcaaa
aacctcaaagacctgaacgccctggattatgaggaaaacctgacagctctgggtttccac
ctggcccatttacctgtggagccccacattgggaaactcatcctgtttggagctctgctg
ggctgcctcaatcccgtcctcaccattgctgcttcactcagcttcaaagaccctttcttc
atccccctgggtaaagagaagatggcagacatgaagagaaaggtattatccaggaactcc
aagagtgaccatctcactatagttaacgcttttcagggctgggaggaagccaaacgacga
ggtgccaggtgtgagagggactattgctgggacaacttcctgtctgccaatacactccag
atgctgcacaacatgaagggtcagtttgctgagcaccttatgcatgcaggctttgtcagc
agttcaaaccccaaagaccccaaatccaacgtcaactcagataacaataagttaatcaaa
gcagtgattgttgccggtctctacccaaaggtggccatgatcaaaccatcacacagcaaa
aagagaccaggtgcgaaggtgtacactcaggctgatggaaaagtgtgtatccacccgaaa
tctgtcaacgctgaagagactgagttcaactacacgtggctcatctaccacctgaagatg
agaacaagcagtatcttcctgtatgattgcactgaggtgtccccgttctccctactattc
tttggaggaaacatcacgatccagaaggaccaggaccaggagaccgtcgctgtggacgag
tggatcgtcttcagatcaccggctcgcatcgctcaccttgtaaagagtttaaagacagag
ctggattccctgctggaggagaaaatacgtaaccctgctcctgtggactggcagaaccgt
caatccaaggactgtgctgtcatcacagccatcattgacctcatcaccacacaggagaag
ccatcaggcggcactaaaggatacgacagaccgtgggcgtctgccccgcgaggacaacat
tcttactttaatgatgacgatgctgatgatgacgatgattattga
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