Cheilinus undulatus (humphead wrasse): 121522356
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Entry
121522356 CDS
T07473
Symbol
scn1laa
Name
(RefSeq) sodium channel, voltage-gated, type I-like, alpha
KO
K04834
voltage-gated sodium channel type II alpha
Organism
cud
Cheilinus undulatus (humphead wrasse)
Brite
KEGG Orthology (KO) [BR:
cud00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cud04040
]
121522356 (scn1laa)
Ion channels [BR:
cud04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
121522356 (scn1laa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
IQ_SCN5A_C
GPHH
PKD_channel
ATP-synt_B
Lustrin_cystein
Motif
Other DBs
NCBI-GeneID:
121522356
NCBI-ProteinID:
XP_041662531
LinkDB
All DBs
Position
15:complement(44171127..44206660)
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AA seq
1987 aa
AA seq
DB search
MAQLLVPPGVDSFRPFSRESLKAIEKRIAEEKAKKPKGEKKKRNNDSELKPSRDLEAGKS
LPLLYGEVPKGLVSTPLEDLDPYYCNQKTFIVLNKGNFIYRFNAAPALYLLSSFNLLRRI
SIKILVHSLFNMVIMCTILANCAFMTLSQPPHWAKNVEYTFTAVYTFESLIKILARGFCI
GKFTFLRDPWNWLDFSVIVMAYATEFVKSLGNLSALRTFRVLRAFKAISVIPGLKTIVGA
LFQSVKKLADVMILTVFCLSVFALIGLQLFMGHLKNKCIKTLTNDTFTTNDTFTSNETMI
NGTKQNNTFRWEDYAADRRNHYIIPGKRDPLLCGNSSEAGQCPEGYTCIKFGKNPDYDYT
SFDSFGWAFLSLFRLMTQDYWENLYQQTLRAAGKPYMIFFVLVIFLGSFYLVNLILAVVA
MAYEEQSQATIKETEEKEEEYRAMMEQLAQQQEEAQVAAAAAAAEGEGIGDKGGGTESSS
GASKLSSKSAKERRNRRRKRKEEEGKGADGNFPKSDSQDSIKKARCRFSVDANLLNYDMK
CSTAHQSFLSFRGPLFSPRRNSRTSIFSFRSQAQDGGSENEFADDENSIFEDNLSRRGSL
FFPSTRDRQSSSVSQGSFFSSFLLQPNGIKHSSVDRNGVVSLVGWNSLPSSPVGLVLPTA
DTTDTGGGLNPECMDFLEGPETRQRAQSVASVITSTMEELEESRQKCPPCWYDFAHTFLI
WECCPTWLKIKKFINLMVMDPFADLTITICIAVNTLFMAMEHQPMKPGFSEMLSVGNQVF
TAIFTAEMVLKIIAMDPYYYFQKGWNIFDAIIVSLSLMELFLAKQGGMSVLRSFRLLRVF
KLAKSWPTLNTLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKNYKDCVCKISADC
TLPRWHMNDFFHSFLIVFRVLCGEWIETMWDCMEVSGTTMCIIVYMMVMVIGNLVVLNLF
LALLLSSFSADKLEANEEDPEMNNLTIAIGRIQNGIAYAKSALRSHYSRCCLRYTKKGKG
EDKSLEELQKSLGPNGVPNHTIKDFPRNGNADVTGVDKNGDKYIVISKSDDSIMSFINNP
SLTVTVPIAVGESDFENLNTEDFSSLSSDASGSEKSPVDDDGQFSSSEGSTVDGMAGAEG
ESEDAELEEAMDPDSCFPEGCVQKYKCCQVNVEKGWWKMWWTLRKTCFRIVEHNWFESFI
IFMILLSSGALAFEDVYIEKRKTVKTVLEFADKIFTYIFILEMLLKWVAYGFAKYFTNAW
CWLDFLIVDVSLVSLVANSMNYSDLGPIKSLRTLRALRPLRALSRFEGMRVVVNALLGAI
PSIFNVLLVCLIFWLIFSIMGVNMFAGKFYRCVNKTNDEIFPVDIVANRSQCLSRNDSRW
RNVKINFDNVGYGYLALLQVATFKGWTDIMYAAVDSRNNIDDQPDYEVNLKMYMYFVVFI
ITGAFFTLNLFIGVIIDNFNQQKKKLGGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPS
NKIQGYIFDLTTKQAFDIVIMVLIVLNMVAMMVETDEQSPTKIDVLWWINMIFIIVFTGE
CLLKMISLRHYFFTNGWNVFDFIVVILSIIGMFLSDLIEKYFVSPTLFRVIRLARIGRVL
RLIKSAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFAYVKRERGIDDLFNF
ETFGSSMICLFQITTSAGWDGLLDPILNKLPDDCNRTKEHPGSTVVGDCGNPPVGIAFFV
SYIIICFLIVVNMYIAVILENFGVATEESADPLSEDDFEMFYEVWERFDPHATQFIEYKK
LEEFADTLDPPLRIAKPNKLELISMDLPMVSGERIHCLDILFAFTKRVLGEGGEMDILRG
QMEERFMASNPSKVSYEPITSTLRRKQEDMSATVIQKAYRQYASRHVAIKSPDSSSDNNQ
KDGTIIDNEDLVTDSLKKNSSASKSELTPPTAPQHACNSVTMNGNNKYEKDKSEKEVVGK
DVREQDM
NT seq
5964 nt
NT seq
+upstream
nt +downstream
nt
atggcacagctgcttgtaccaccaggtgtagacagcttccgcccctttagtcgtgagtcc
ctcaaagctattgagaagcggattgcagaggagaaggccaagaagcccaaaggggagaag
aaaaaacgcaacaatgacagcgagcttaagccaagccgtgacctggaggcgggcaaatcc
ctccctctgctgtacggggaggttcctaaaggtttggtgtcgacaccgctggaggacctg
gacccctactactgtaatcagaaaactttcatagtgttaaacaaaggaaacttcatctac
cgcttcaacgccgctcctgccttgtacctcctgagctccttcaacctattaagaagaata
tcaataaagattttggtacactcattgttcaacatggtgatcatgtgcactattctcgcc
aactgtgcatttatgactctgagtcaaccgccgcactgggcaaagaatgtagagtacaca
tttactgcagtgtatacctttgaatccctcattaaaattttagctcgtgggttttgcata
gggaagttcacatttctaagagatccctggaactggctggatttcagcgtcattgtcatg
gcgtatgcaacagagtttgtaaagagtttgggcaacctctctgctcttcgcacattcaga
gtgctgagagcctttaaagctatctcagttatcccaggtctgaagaccattgttggtgcg
ctgttccagtcggtgaagaagcttgctgatgtaatgatcctcactgtcttttgcctgagt
gtcttcgccctcataggattacaactgtttatgggccatttaaagaacaagtgtataaag
accttaacaaatgatactttcacaacaaatgacactttcacatcaaatgagaccatgata
aatggaacaaagcagaacaacactttcagatgggaagactacgcggcagataggcgtaat
cattacataattccaggcaaacgtgacccattgctttgtgggaacagcagtgaggctggg
cagtgtccagaggggtacacttgcatcaaatttggaaagaatccggactatgattacaca
agctttgactcatttggttgggccttcctctccctgtttcgactgatgacacaggattac
tgggaaaacctttaccagcagacgctgcgggctgcagggaagccctatatgatctttttt
gtgctggtgatatttctcgggtccttctacctggtcaacctgatcttggctgtagtagct
atggcctatgaggagcagagccaggccactataaaggagacagaggagaaagaggaggag
tatagggctatgatggagcagctggcacaacagcaggaagaagctcaggtggcagcagct
gcagctgctgcagaaggcgaggggattggagacaaaggtggaggcaccgagagctcgtct
ggcgcctccaagctcagctccaaaagcgccaaggaaagacgcaacaggcggaggaaaagg
aaagaggaagagggaaaaggagctgatgggaacttccctaaatcagattcccaggacagc
ataaagaaagctcgctgccgcttctctgtggatgcaaaccttctcaactatgacatgaaa
tgctcaactgcacatcagtcctttctgagttttcgtgggcccttgttctcacccagacgg
aacagcaggaccagcattttcagtttccggagccaagcacaggacgggggctcagaaaac
gagtttgccgatgatgagaacagcatttttgaagacaacctgagtcggaggggttctctg
ttttttcccagcactcgagatcgacagagcagcagtgtgagccagggcagctttttttcc
agtttcttacttcaacccaatggaatcaaacacagctctgtagaccgcaatggggttgtg
tctctggtgggatggaattcactgccatcttcacctgtggggctcgttctgcctacagct
gacaccactgacaccggtggaggactaaacccagagtgtatggacttccttgagggtccg
gagaccagacagagagcacaaagtgtagctagtgtcataacaagcacaatggaagagctc
gaagagtcaaggcagaagtgtcctccttgctggtatgattttgcccacacctttctcatc
tgggaatgttgtccaacatggttgaagatcaagaagtttattaacctcatggtaatggat
ccatttgctgacctgaccatcaccatctgcattgctgtcaacacgttgtttatggctatg
gagcatcaaccaatgaaaccaggattctctgagatgctgagtgtaggcaatcaggtattc
actgcaatcttcacagcagaaatggtccttaaaatcattgccatggacccatattattac
ttccagaagggatggaatatttttgatgcaatcattgtcagcttaagcttgatggagctt
tttttggcaaaacagggcgggatgtctgtcctgaggtcgttcagattgctgcgagtattt
aagctggccaaatcctggcccactctcaacacccttatcaaaatcattggtaactctgtg
ggggcattgggcaacctgacgctggtgctggccattatcgtgttcatctttgccgtggtg
ggcatgcagctgtttggaaagaactacaaggactgtgtgtgtaaaatctctgcagactgc
actctgccccgatggcacatgaatgacttcttccattcattcctcattgtgttccgagtg
ctttgtggagagtggatagagaccatgtgggactgcatggaggtgtccgggacgaccatg
tgcatcattgtgtacatgatggtcatggttattggaaaccttgtggttctgaatctgttc
ctggccctgctgctgagttcattcagtgctgacaaactggaagcaaatgaagaagaccca
gagatgaacaatctgacgatagccatcggacggattcaaaacggcatcgcctacgccaag
tcggcgcttcgaagtcactacagccgctgttgtctcaggtatacaaagaaaggaaagggt
gaggacaaatctctggaggagctgcagaaatctttggggccgaacggcgtccccaaccac
accattaaagacttccccaggaatggaaatgcggatgttaccggagtggacaaaaatgga
gacaagtacatagtgatcagtaaaagcgatgattctatcatgtctttcatcaacaatccc
agtctgactgtgactgtccccatcgctgtgggcgagtcggactttgaaaacctaaacaca
gaagatttcagcagcctctcatcagatgcatctgggtcggaaaagtctcctgtcgacgac
gatggtcagtttagctcctcagaaggcagcacagtggacgggatggcaggggcagaagga
gagtcagaagacgccgaactggaagaagccatggaccctgattcttgctttcctgaaggc
tgtgtgcaaaagtacaagtgctgtcaagtaaacgtagaaaagggttggtggaagatgtgg
tggacacttagaaagacatgtttccggattgtggagcacaactggtttgagagctttatc
atcttcatgatcttgctcagcagtggagcgctggcatttgaagatgtctacattgaaaag
aggaagaccgttaaaacggtgttggagtttgctgataaaatcttcacctacatcttcatc
ctggagatgctgctgaaatgggttgcatatggattcgccaagtatttcaccaatgcctgg
tgctggctggatttcctcattgttgatgtctccctggtcagtttagttgccaattccatg
aactactctgatctcggtcccatcaagtctctaagaacacttcgagctctgaggccgttg
agagccttgtcgcggttcgaaggaatgagggtggttgtcaacgccctactgggagcaatt
ccttccattttcaacgtgttgctggtttgtctcatcttctggctcatcttcagcatcatg
ggagtcaacatgtttgctgggaagttctaccgctgcgttaataaaactaacgatgagatt
tttcctgtggacattgtggcaaataggtcacagtgtcttagccgtaatgacagtcgctgg
aggaatgtcaaaatcaactttgacaatgttggctacggctatcttgcattgcttcaggtg
gctacattcaaaggatggacagatatcatgtatgctgctgtggactctcgaaacaatatc
gatgatcagccagactacgaggtcaacctgaaaatgtacatgtactttgttgttttcatc
ataactggagccttcttcacacttaatctctttattggtgtcatcattgataattttaat
caacaaaagaaaaagttaggaggtcaagacatcttcatgaccgaagaacagaagaagtac
tacaacgccatgaaaaagctggggtcaaagaaaccacaaaaacctatcccaagaccatca
aacaaaattcaaggatacatctttgacctgaccacgaaacaagcttttgatattgtcata
atggttctaatagtgctaaatatggtggccatgatggtggaaactgatgagcagtcacca
acaaagattgatgttttgtggtggatcaatatgattttcatcatcgtcttcactggagag
tgtttgttgaagatgatctcgcttcgtcattactttttcacaaacggatggaatgtgttt
gacttcattgtggttatcctttcaatcattggcatgtttctttcagacctgatcgagaag
tattttgtttcgccgaccttgttcagagtcatccgattggctcgaattggccgtgtcctc
cgccttattaaaagtgccaaaggaatccgcacgctgttatttgccttgatgatgtcactt
cctgccttgtttaacattgggctcctgctcttccttgtgatgtttatctatgccattttt
ggcatgtcgaattttgcatacgtcaagagggaaagaggcatcgacgatcttttcaacttt
gagacgtttggcagcagcatgatctgtttgttccagatcaccacctcagcaggatgggac
ggcctactagacccgattctcaacaaactcccggacgattgtaacagaaccaaggagcat
cctggcagtactgttgtgggagactgtggaaaccctcctgtgggaattgccttctttgtg
agctacatcatcatctgtttcctgattgttgtgaatatgtacattgcagtcatcttggaa
aattttggtgtggcaactgaggagagtgcagaccccttaagtgaggatgattttgagatg
ttttatgaggtctgggaaaggtttgatcctcatgccacacaattcatagagtacaagaag
ttggaggagtttgcagatactctggatccaccattgcgcatagcaaaacccaacaagctt
gaactaatctctatggatctaccaatggtgagtggggaacgcattcactgtctggacatc
ctgtttgcatttacaaaacgtgttctgggcgagggtggagagatggacattttaaggggc
cagatggaggaacgtttcatggcctccaatccttccaaagtgtcctacgaacccatcacc
tccaccctccgtcgcaagcaggaggacatgtcagccactgtcattcaaaaagcctacaga
cagtatgcaagcagacatgttgccattaagtcccctgactcttccagtgataacaatcaa
aaggatggaacaatcattgacaatgaggatcttgtcacagacagcctcaaaaaaaattct
agcgccagtaaaagtgaactgacacctccaacggcccctcaacatgcatgtaacagcgtg
acgatgaatggaaacaacaaatatgagaaagacaaaagtgaaaaggaggttgtgggcaaa
gatgtcagggagcaagatatgtaa
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integrated database retrieval system
