Cheilinus undulatus (humphead wrasse): 121523058
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Entry
121523058 CDS
T07473
Symbol
bard1
Name
(RefSeq) BRCA1-associated RING domain protein 1 isoform X1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
cud
Cheilinus undulatus (humphead wrasse)
Pathway
cud03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cud00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
121523058 (bard1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cud03019
]
121523058 (bard1)
04121 Ubiquitin system [BR:
cud04121
]
121523058 (bard1)
03036 Chromosome and associated proteins [BR:
cud03036
]
121523058 (bard1)
03400 DNA repair and recombination proteins [BR:
cud03400
]
121523058 (bard1)
Messenger RNA biogenesis [BR:
cud03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
121523058 (bard1)
Ubiquitin system [BR:
cud04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
121523058 (bard1)
Chromosome and associated proteins [BR:
cud03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
121523058 (bard1)
DNA repair and recombination proteins [BR:
cud03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
121523058 (bard1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank
zf-RING_6
Ank_2
Ank_4
Ank_5
Ank_3
BRCT
BRCT_2
zf-RING_5
Ank_KRIT1
zf-C3HC4_3
ANK_LRRK2
PTCB-BRCT
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
121523058
NCBI-ProteinID:
XP_041663732
LinkDB
All DBs
Position
15:48498013..48551988
Genome browser
AA seq
797 aa
AA seq
DB search
MEDGGAAVTDWKNTKEAVERFRRLRLCSRCSDLMKEPVCLGMCEHMLCRSCAGPGAGDGC
VVCHSPAWVKDIQINRQLSSIVQLLCGLESLLGLTEEPDSSNAVIPPQPESPVLKHKKNF
KIWFSPRSRKVRCTVEKPAEVTRASKEAATAKPESLTAQGQDLSVFNFTSSSQDSGSGCS
EGCKNENSNKKKRSTKKNTAGRKASVQVAPRTTRKQSKQMMKKSRLEAINQQWGITEEVD
ALKEKELPCAGGARRSSKRVSFLSPSVTSEEPQPEAAQQRTEEVSPDRSTEGASLSGGSV
TTHTDQTQPRQSTPDNGKLPQNDPNPAGSPEKQNNASTPKQSSKRSRVEEKLATPETTPK
RPRASPGRRRNSQMSPAILNPPSSASPRCDKRIKKSPRRERGDSPSLPAAVGRRSPSVSS
VRTTSGSPAVTKRNHRGETLLHLAAIKGDVEAVRGLLDQGSDPNLKDNAGWTPLHEACNL
GHLAVVEVLLLSGALLNTPGYENDSPLHDAVRNGHPAVVKLLLQHGASQSVLNLHGKRPV
DYAVSPEMLQIFQEASAGSRNANTPLSPSASLSVVSECARREEMVVFLSSKLSQPEQLQL
AKLGELLGGRIADTVSGSVSHVVVPEGHMPTTFSALLGLLAGCWIVKFSWVEACLQAGKW
IPETEHEAGEGPQRSRINRCSLLPPLFDGCFFFLLGSFKTPPKDELARLLREGGGQLLSR
QPKPDSDVTQTLSAAAYHALPGSDQALCTQYIIFDPRGPHRPAVVRRGKVWSAPSSWVIE
CITAFQLLPVPDPQTVV
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atggaggatggcggagctgctgtgacggactggaagaacactaaagaggcggtggagaga
tttaggcggcttcgcctctgctccaggtgctcagatttaatgaaggagcccgtgtgtctg
gggatgtgtgagcatatgctttgcaggtcctgtgcgggccctggggcgggagacggctgt
gtggtgtgtcatagtcctgcgtgggtgaaggacattcaaatcaacaggcagctgagcagc
atcgtgcagctcctctgcggtttggagtctctgctcggcctcacagaagagccagattct
tctaacgccgttattcccccacaacctgagagtcctgtattaaaacacaaaaagaatttc
aagatctggttcagcccccgcagccgtaaggtccgctgcacggtggagaagcctgcagag
gtcaccagagcttctaaagaagcggctacagcaaagccagagtcgctcaccgctcaaggt
caggacttgtccgttttcaatttcacctcgtcctcccaggactcgggctccggctgctca
gaaggatgcaaaaatgaaaactccaataaaaaaaagaggtcaactaagaaaaacactgct
ggcaggaaggcatcggtgcaggtagctccaaggaccacacggaaacagagcaaacagatg
atgaagaagagcaggctggaggcgataaaccagcagtggggaatcacagaggaggtagat
gccctaaaggagaaggagctgccctgtgctggaggagcaaggaggtctagtaagagggtt
tccttcttaagcccttctgtcacatctgaagagcctcagcctgaagctgcacagcagaga
actgaagaagtaagccctgacagaagcaccgagggggcgagcctctcaggaggcagtgtc
actacacacactgaccaaacccagcctcgtcagagcacaccagacaatggtaaactgcct
caaaatgacccaaatccagctggaagtccagagaaacagaacaatgcatctaccccaaag
caatcctcaaaaagatccagagtggaggagaagctagccacaccagagaccaccccaaaa
aggcctcgagcttcccccggcaggaggagaaattcacagatgtctccagccatccttaac
cctccatcttcagccagccccagatgtgataagagaataaaaaaatcaccaaggcgagaa
cgaggagacagcccgtctctccctgcagctgttggcagaaggtctcctagtgtgtcttct
gtgcggaccacctcagggagccctgcagttacaaagaggaaccacagaggagagaccctg
ctgcatctagctgctattaagggagacgtagaagctgtcagggggctgctggaccagggg
tctgacccaaacctgaaggataatgctggctggactcctctgcatgaagcatgtaacctg
ggccacctagcagttgtggaagtgctgctcttgagtggcgccctcctgaatacacctggc
tacgaaaacgactcccctctccatgacgctgtgaggaacggccacccggccgtcgtcaag
cttctgctgcagcacggggcctctcagagcgtgcttaatctgcatggaaagcggcctgtc
gactatgcagtgagtccggagatgctgcagattttccaggaagcctcggcaggaagtaga
aatgctaatacacctctgagcccctcagccagcctctctgtggtgagcgagtgtgcgagg
agggaggaaatggtggtgtttctttccagcaagctatcacaaccggaacagcttcaactg
gccaaactgggcgagctactgggagggaggattgctgacacagtttctggctcagtcagc
catgttgttgtgccagagggacacatgcccaccaccttctccgccctcctgggtctcctc
gctggctgctggatcgttaaattcagctgggtggaagcgtgtctgcaggcaggcaagtgg
atccccgaaacggagcacgaagcaggagaaggcccgcagcgcagtcgcatcaacagatgc
agcctgctccctccgctctttgacggctgtttcttcttcctcctcggctcctttaagacg
cctccgaaagacgaactcgccaggctgctccgagagggaggaggtcagctgctcagccgg
cagcccaagcccgacagcgatgtgacacagaccctgagcgccgccgcctaccacgcactg
ccaggctccgaccaggctctctgcacccagtacatcatctttgatccccgggggccgcac
aggccggccgtggtgaggagagggaaggtgtggtcggctccatccagctgggtcattgaa
tgcatcacagctttccagctcctccctgtgccagatcctcagaccgtggtctga
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