Cheilinus undulatus (humphead wrasse): 121523986
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Entry
121523986 CDS
T07473
Name
(RefSeq) CCR4-NOT transcription complex subunit 3-like
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
cud
Cheilinus undulatus (humphead wrasse)
Pathway
cud03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cud00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
121523986
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cud03019
]
121523986
Messenger RNA biogenesis [BR:
cud03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
121523986
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
121523986
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
7tm_6
Motif
Other DBs
NCBI-GeneID:
121523986
NCBI-ProteinID:
XP_041665054
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All DBs
Position
16:8533974..8583884
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AA seq
930 aa
AA seq
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MADKRKLQGEIDRCLKKVAEGVEQFEDIWQKLHNAANANQKEKYEADLKKEIKKLQRLRD
QIKTWVASNEIKDKRQLVENRKLIETQMERFKVVERETKTKAYSKEGLGLAQKVDPAQRE
KEEVGTWLTNTIDTLNMQVDQFESEVESLSVQTRKKKGDKEKQDRIEELKKFIEKHRHHI
RMLETILRMLDNDSVQVDAIRKIKDDVEYYLDSSQDPDFEENEFLYDDLDLEDIPQTLVA
TSPPGHSHLEDEIFQHSSSTPTSTTSSSPIPPSPATCTTENSEDDKKRGRSTDSEVSQSP
VKNGNPSSSLSSSSSSSSSSSSSSSSVLGLTSSSLVSMATMAGGGSSGSGGSSHHVNSGG
LLSNTSAGSYSNATQQPPHPSAQQQQAKNSITSSSSAPLTNSTSATNSYPASSASSPPNT
STQGLLSSNSQPPALSGVPQTSNSLGLSLGLALGKGGMSGSITTSPMSAGLGLSGMPASL
STMASLLSSSTPAPYAQAAAAGTLSSGLPGSLGGVSTTTTNNSGLGSIGSGSITVGGPTS
STGGLLGAAPGLNSISSGILGLGSGQSGIQGSSLVSLSPVGGLAPGSGVGVIGSNGGSSG
STGSGVVGGNSSLSIRPPSQQKQNGSTSYSAVVADSTTDSALNSASQSQSSQPSSLTSIA
NQPKDTGPSLLGSLSLSSSSPSPAFYSEAKTASGGSLLNGPLSYSQPSDSIKPQEPLSSL
KSMAERAALSSGMEGDVPSLHLTPDIFPSSTTAPSGPPSAPQPSLSEVSIPPSLGVCPLG
PVPLSKDQLYQQAMEEAAWTHMPHPSDSERIRQYLMRNPCPTLPFHHQVPPPHSDTVEFY
QRLSTETLFFIFYYLEGTKAQYLAAKALKKQSWRFHTKYMMWFQRHEEPKTITDEFEQGT
YIYFDYEKWGQRKKEGFTFEYRYLEDRDLQ
NT seq
2793 nt
NT seq
+upstream
nt +downstream
nt
atggccgataaaaggaaacttcaaggtgaaatagatcgatgtctgaaaaaagtagcggag
ggcgtggaacagtttgaagatatctggcaaaagcttcacaatgcagccaacgcaaatcag
aaggagaaatatgaagcagacctcaagaaagagattaaaaagctacagcgtcttcgagac
cagatcaagacgtgggtggcatccaacgagatcaaagacaaaaggcagctagtagagaac
cgcaaactcatagaaacgcaaatggagcggttcaaagtggtggagagggaaacaaagacg
aaagcgtactctaaagaagggctcggtctggctcagaaggtcgacccagctcagagggaa
aaggaggaggtcggcacgtggttaacgaatacgatagacacgttaaacatgcaggtggac
cagtttgagagcgaagtggagtctctttcagtccagacgagaaaaaagaaaggagacaag
gagaagcaggaccggatcgaggaactaaagaagttcatcgagaaacatcggcaccacatc
aggatgttggagacgatcctgaggatgctggacaacgactcggtgcaggtcgacgccatc
aggaagatcaaggatgatgtggagtattatctcgactcgtcgcaagatccagacttcgag
gagaacgagtttctttacgatgatctggacctggaagacatccctcagacgctggtcgcc
acctccccgccgggacactcgcacttggaggatgagatcttccagcactctagcagcaca
cccacctccaccacctcgtcctcgcccatccccccctcgcctgctacttgcactacggag
aactcagaagatgacaagaaaaggggacgttcgacggacagtgaagtcagtcagtcgcct
gtgaagaatggaaatccttcgtcttcgttatcttcctcctcctcttcctcctcgtcctcg
tcctcctcttcctcctctgtcttgggtctaacctcatcatcactggtctctatggcgacc
atggctgggggtggaagcagcggctctgggggcagcagtcaccacgtgaactctgggggt
ctcctttccaacacctccgccggcagctacagcaacgccacccagcagcccccccaccca
tcagcacagcagcagcaggccaaaaactccatcacctcctcctcctccgctcctctaacc
aactccacctctgccaccaacagctaccctgcctcctccgcctcctctccgcccaacacc
agcacacagggactcctgtcctcgaactcccagcccccggcactctctggggtcccgcag
acctccaacagtctgggtctaagtctgggtctggctctggggaaaggcggcatgtcgggc
tccatcaccaccagccccatgtccgcaggtctcggcctgtcagggatgccggcgtctctg
agcaccatggcgagcctcctgtcaagctccacccccgcaccctacgctcaggcagccgcc
gcgggcacgctcagttcaggcctgccagggtctttaggtggcgtcagcaccacaacgacc
aacaacagtggcctgggctccatcggcagcgggagcatcacagtcggcgggccgacgtct
tcgacaggaggtctgctgggagcggcgcctggcttgaacagcatcagctcggggattctg
ggcctgggctcgggacagtcagggatccaggggtcttctctggtgtcgcttagccctgtt
ggaggtttagcacccggtagtggagtaggagtgatcgggagtaacggaggcagctcagga
tcaacggggagcggagtagtgggagggaactcgtcgctctccatcaggccgccgagccaa
cagaagcagaacggcagcaccagttacagtgccgtggtagcagacagcacaacagactcc
gccctcaacagtgccagccaatcacaaagcagccaaccctcatctctgacctccatagcc
aatcagcctaaggacactggtcccagtttactcggctctctaagtttgtcatccagttca
ccgtctccggctttctacagcgaggccaaaacggcgagcggaggcagcctgctgaacggt
ccactgtcctactcacagccatccgacagcatcaagccacaggagcctctgagcagcctc
aagtccatggccgagcgagcagcactcagctcagggatggagggagacgtgccctccctg
cacctcaccccagacatcttccccagcagcaccacggcgccctcgggcccaccgtcagca
cctcagccctcactgtcagaggtcagcatccccccgtcgttgggggtctgcccactgggg
ccggtccccctatccaaagaccagctctaccaacaggccatggaggaggcggcgtggaca
cacatgccacacccgtccgactccgagaggatcaggcagtacctgatgaggaacccatgc
cccaccttgcctttccaccaccaggtgcccccgcctcactccgacactgtggagttttac
cagaggctttccacagaaaccctcttcttcatcttttactacctggagggcactaaggcc
cagtatctggcagccaaagccctgaagaaacagtcctggaggtttcacacaaaatacatg
atgtggtttcagagacacgaagaacccaagaccatcactgatgagtttgagcagggaaca
tatatttactttgactatgagaaatggggccaacggaagaaggaaggcttcacatttgag
taccggtaccttgaagaccgagacctccagtga
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