Cheilinus undulatus (humphead wrasse): 121524262
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Entry
121524262 CDS
T07473
Symbol
exosc7
Name
(RefSeq) exosome complex component RRP42
KO
K12589
exosome complex component RRP42
Organism
cud
Cheilinus undulatus (humphead wrasse)
Pathway
cud03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cud00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
121524262 (exosc7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cud03019
]
121524262 (exosc7)
Messenger RNA biogenesis [BR:
cud03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
121524262 (exosc7)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
121524262 (exosc7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
121524262
NCBI-ProteinID:
XP_041665503
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Position
16:complement(17270695..17274563)
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AA seq
291 aa
AA seq
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MATVQVSEAEKVYILHGIRDDLRVDGRGCEDYRHMEIETDVVSNTDGSAKITLGHTVALV
GIKAEIGKPRPMVPDEGYLEFFVDCSANATPEFEGRGGEELGTELSNTLYKVFNNKHSID
LRSLCISPGEHCWLLYVDVLLLQCDGNLYDAISIAIKAALFNTKIPRVFISSDDEGGKEI
ELSDDPYDCMRLNVENVPCIVTLCKVGHRHVVDATLQEKACSVASLIISVTHKGTVTCMR
KVGGGSLDPESIYEMTEAGKRVGKALHAPLMKLLQQEESLGTKRQKIGFLG
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atggcaacagtacaagttagcgaggctgaaaaagtgtacattttacatggtatacgggat
gacttacgggtggatgggagaggctgtgaggactacagacacatggaaatagagacagat
gtggtgtcaaacacggacggctcggctaaaatcacactgggccacacagtggctctagtt
gggattaaggcggaaattggaaaacccaggcccatggtgcctgatgaaggatatttggag
ttctttgttgactgttcagccaatgccacccctgagtttgagggcagaggaggcgaggag
ctgggcacagagctcagtaacactctttataaagtctttaacaacaaacacagcatagac
ctccggagcctctgtatcagtccaggagagcactgctggctcctctatgtggatgtgctg
ctcctgcagtgtgatggaaacctgtatgatgccatttcaatagctatcaaggcagctctc
ttcaacacaaaaattcccagagtattcatatcatctgacgatgaaggagggaaggaaatc
gagctgtcagatgatccatatgactgtatgagactcaatgtagaaaacgtgccctgtata
gtgacgctgtgtaaggtgggtcacaggcacgtagtagacgccaccctacaggagaaggcc
tgctctgtggcaagcctgatcatctctgtcacacacaagggcacagtcacttgcatgagg
aaggtgggcgggggcagtctggacccagagagtatttatgaaatgacagaggcaggtaaa
cgtgtgggaaaagctcttcatgctcctctaatgaagctgcttcaacaggaggagagtttg
gggaccaagcgacagaaaattggctttcttggttaa
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