KEGG   Cheilinus undulatus (humphead wrasse): 121524262
Entry
121524262         CDS       T07473                                 
Symbol
exosc7
Name
(RefSeq) exosome complex component RRP42
  KO
K12589  exosome complex component RRP42
Organism
cud  Cheilinus undulatus (humphead wrasse)
Pathway
cud03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cud00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    121524262 (exosc7)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cud03019]
    121524262 (exosc7)
Messenger RNA biogenesis [BR:cud03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     121524262 (exosc7)
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Cofactors
     121524262 (exosc7)
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 121524262
NCBI-ProteinID: XP_041665503
LinkDB
Position
16:complement(17270695..17274563)
AA seq 291 aa
MATVQVSEAEKVYILHGIRDDLRVDGRGCEDYRHMEIETDVVSNTDGSAKITLGHTVALV
GIKAEIGKPRPMVPDEGYLEFFVDCSANATPEFEGRGGEELGTELSNTLYKVFNNKHSID
LRSLCISPGEHCWLLYVDVLLLQCDGNLYDAISIAIKAALFNTKIPRVFISSDDEGGKEI
ELSDDPYDCMRLNVENVPCIVTLCKVGHRHVVDATLQEKACSVASLIISVTHKGTVTCMR
KVGGGSLDPESIYEMTEAGKRVGKALHAPLMKLLQQEESLGTKRQKIGFLG
NT seq 876 nt   +upstreamnt  +downstreamnt
atggcaacagtacaagttagcgaggctgaaaaagtgtacattttacatggtatacgggat
gacttacgggtggatgggagaggctgtgaggactacagacacatggaaatagagacagat
gtggtgtcaaacacggacggctcggctaaaatcacactgggccacacagtggctctagtt
gggattaaggcggaaattggaaaacccaggcccatggtgcctgatgaaggatatttggag
ttctttgttgactgttcagccaatgccacccctgagtttgagggcagaggaggcgaggag
ctgggcacagagctcagtaacactctttataaagtctttaacaacaaacacagcatagac
ctccggagcctctgtatcagtccaggagagcactgctggctcctctatgtggatgtgctg
ctcctgcagtgtgatggaaacctgtatgatgccatttcaatagctatcaaggcagctctc
ttcaacacaaaaattcccagagtattcatatcatctgacgatgaaggagggaaggaaatc
gagctgtcagatgatccatatgactgtatgagactcaatgtagaaaacgtgccctgtata
gtgacgctgtgtaaggtgggtcacaggcacgtagtagacgccaccctacaggagaaggcc
tgctctgtggcaagcctgatcatctctgtcacacacaagggcacagtcacttgcatgagg
aaggtgggcgggggcagtctggacccagagagtatttatgaaatgacagaggcaggtaaa
cgtgtgggaaaagctcttcatgctcctctaatgaagctgcttcaacaggaggagagtttg
gggaccaagcgacagaaaattggctttcttggttaa

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