Cheilinus undulatus (humphead wrasse): 121524874
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Entry
121524874 CDS
T07473
Symbol
rc3h2
Name
(RefSeq) roquin-2 isoform X1
KO
K15690
RING finger and CCCH-type zinc finger domain-containing protein
Organism
cud
Cheilinus undulatus (humphead wrasse)
Brite
KEGG Orthology (KO) [BR:
cud00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cud03000
]
121524874 (rc3h2)
04121 Ubiquitin system [BR:
cud04121
]
121524874 (rc3h2)
Transcription factors [BR:
cud03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
121524874 (rc3h2)
Ubiquitin system [BR:
cud04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
121524874 (rc3h2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Roquin_1_2-like_ROQ
ROQ_II
zf-RING_5
zf-CCCH
zf-RING_UBOX
zf-RING_2
zf-CCCH_4
Prok-RING_4
zf_CCCH_4
zf-CCCH_UNK
zf-C3HC4_2
zf-C3HC4_4
zf-RING_4
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
121524874
NCBI-ProteinID:
XP_041666348
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All DBs
Position
LG17
Genome browser
AA seq
1149 aa
AA seq
DB search
MPVQAAQWTEFLSCPICYNEFDSSGHQPISLGCSHTVCKTCLHKLHRKACPFDQTPISTD
IDLLPVNCALLQLVGAQVPEVQPVSLSSAAEVENYEACRACVEELALYLKPISGAKGVAT
LSPSVLSRPMQRKLVTLVNCQLVEEEGRVRAVRAGRSLGERTVTELILQHQNPQQLSANL
WAAVRARGCQFLGPAMQEDALKLVLLALEDGSALSRKVLVLFVVQKLEARFPQASKTSIG
HVVQLLYRASCFKVTKRDEDSSLMQLKEEFRTYEALRREHDAQIVHIAMEAGLRISPEQW
SSLLYGDLIHKSHMQSIIDKLQSPESFAKSVQELTIVLQRTGDPANLTSLRPHLELLANI
DHNPDAPAPSWEELESVMLAVKLVVHGLVEFIQNFSKKSHDTPQPQANSKYKTSMCRDLR
QQGGCPRGTNCTFAHTQDELEKFRLRNKKSSSVSRVFPLAPGVMGKTFTMEGSLHTDVSA
GVGQGLKGSGENTGSLTEGSPSLTHPQLISRGADMVEDMKRVVPNGSSGANGSNGLPGTN
RNTTGSNEQKQISPPRTPVSHSSASSPLAPVGRGDGVTSLPKHGPFLLRAPHPTQASELY
YQDPHSAYETTHYQPTSCSYYPTSLHPPHKPCMARFLRSSNVTESSLPPSIGPPPSSFPN
DPQTPHPPVSSSSGYPPHQPRDRIVPPAYHPHPGQPPYGPLAPAHGVYAPLYDSRRVWRP
QLYHREDARSNSLPPEVLHSSVYQPPLRERFNSLDSNYCSGAEHRAGLHRDYGRVPLGYE
DLFRRKQEQWAHHHHHHNTNRPSQSSPIFTIDFGTEHVENSGGQCVGCRFRGEESLAHYS
PWSCGTIGPCLSPFEPETLTRTSAHSCSEHSDLDSNTGGGGVGVNSVGKRWLHSLDHYRR
LKDEDPIIPFSEGPIISKWGAISRAARTGYHTTDPVQATACQGSASTTPINFKDYNPHLD
HSDYRWSSRGSDSSSHSSFLESELQGRRTSISSGEKIVSDLQTRQTVFSQDRDQAESESD
PGRDIELELCALDMEDSDHQEIKSQDSLDLNTQQSQDASNLLPPSCSSSLLSSPVEEPSQ
SEDPSTEKLDPHLLKKMAFRKSLSPGGLVSGGLGVGKLLLRTGPPSLGDTTSTRARPETS
VAEMLLNGK
NT seq
3450 nt
NT seq
+upstream
nt +downstream
nt
atgccggtgcaggcggctcagtggacagagttcctgtcctgccccatctgctacaatgag
tttgacagcagcggtcaccagcccatcagcctgggctgctcccacactgtatgtaagacc
tgcctacacaaacttcatcgcaaggcctgtccctttgatcagacgcctatcagcactgat
atcgacctactaccagtcaactgtgccctgctgcagctggtcggagctcaggtcccagaa
gtgcagccagtgagcctgagcagtgcggctgaagttgagaactatgaagcgtgcagggcg
tgtgtggaagagctggctctctacctaaaaccaataagtggagcaaaaggggtggcgact
ctgagtccaagcgtgctcagtcggccgatgcagaggaagctagtgactctggtgaactgt
cagctggtggaggaggagggccgtgtacgggcagtgcgggcaggccgatccttgggtgaa
agaaccgtaacagagctcatcctgcagcaccaaaacccgcagcagctctctgccaacctc
tgggcagctgtgagggcgaggggctgccaatttctgggacctgctatgcaagaagatgca
ctgaaactcgttcttctggccctggaggatggctcagcattatccaggaaggtgttggtt
ttgtttgtagtccagaagctcgaggctcgctttccccaggcctctaaaaccagcataggc
cacgtggtgcagctgctctacagagcctcctgcttcaaggtgaccaaacgagatgaggac
tcctcactaatgcagctgaaggaagagttcaggacgtacgaggctctacggagagagcac
gacgctcagatcgtccacattgccatggaggcgggtctgcgaatatcacctgagcagtgg
tcgtctctgctgtatggagacctcatccacaaatcacatatgcagtcaatcattgacaag
ttgcagtctccagagtcgtttgctaagagcgttcaggagctgacaatcgttctgcagagg
actggagatcctgccaacctcaccagccttagaccgcacctggagctgctggctaacata
gatcacaacccagatgcccctgcgccatcatgggaggagctggaaagtgtgatgctcgct
gtgaagttggtggttcatggacttgtggaattcatacaaaacttcagcaagaagagccac
gatacgccacagcctcaggccaacagcaagtacaagaccagcatgtgccgagacctccgt
cagcagggaggctgtcccagaggaaccaactgtacatttgctcacacacaggacgagctg
gagaaatttagactaaggaacaagaagagcagcagtgtgagccgtgtgttccccttagca
ccgggagttatgggtaaaaccttcacaatggagggcagcctgcacactgatgtgtctgca
ggagtgggtcaggggctcaaaggctctggggagaacacaggctccctgacagagggatca
cccagcctgactcacccccagctgatctccagaggggctgacatggtggaggacatgaag
agagtggtgccaaatggatccagtggggcgaacgggtccaacgggcttccaggcaccaac
agaaacacgaccgggtcaaatgaacagaagcaaatctctcctcccagaactccagtcagt
cactcctcagcctcgtctcctttggcaccagttggacggggtgatggtgtcacttctttg
cccaaacatggtcctttcctcctgcgtgcaccacatcctacgcaggcgtcagagctttac
tatcaggatccccactctgcatatgaaaccacccactaccagccaacctcgtgttcctac
tacccgacttctctccatcctccccataaaccctgcatggctcgcttccttcgatcctca
aacgtcacggaatcctccctgcccccctcgatcggcccgccaccgtcatccttccccaat
gacccacagacgccgcacccacctgtgtcctcctcttcagggtatccaccacaccagcct
cgagatcgtattgttcctcctgcctaccatcctcacccagggcagcctccgtatgggcct
ctggctcctgctcatggtgtttacgctcctctctatgacagcaggagagtatggagacct
cagctgtaccacagagaagatgccaggagtaactctctgcctccagaagtgctgcactcc
tccgtctaccagcctccactcagggagagattcaactctttagacagcaactactgctct
ggagctgaacatcgcgcagggctacacagggattacggccgtgttcctctaggctacgag
gatctgtttagaaggaagcaggagcagtgggctcatcaccaccaccatcacaacaccaac
agaccctcccagtcctcccccatcttcaccatagattttggaaccgagcatgtggagaac
agtggaggccagtgcgttgggtgcagattcagaggtgaggaaagtttagcgcactactct
ccgtggtcctgtggtacgatcggcccctgtctcagcccgtttgaacctgaaacactcaca
cgcacttcagctcactcctgctctgagcattcggacttggacagtaacacaggaggtgga
ggtgttggtgtaaacagtgtggggaagcgatggctgcattctttggatcactaccggcgt
ttgaaagatgaggaccccattattcccttcagtgagggacccatcatctcaaagtggggg
gccatttccagggcagctcgtacaggataccacactaccgacccagtccaagctacagcc
tgccagggcagcgccagcaccacgcccattaactttaaagattacaacccgcacctggat
cacagcgactacaggtggagctcaagaggctctgactcttccagccactccagtttccta
gagagtgagcttcaaggccgtcgcacatccataagcagtggagagaaaatcgtgtcagac
ctgcagacgcgtcagactgttttcagccaggatcgagatcaagctgaaagtgaatctgac
ccaggtcgtgacatcgaacttgaactgtgtgcacttgacatggaggattccgaccaccag
gagatcaagtctcaggattctttggacctgaatactcaacagtctcaggatgcttccaac
ctcctcccaccttcctgctcctcttccctcctgtcttctcctgtggaagagccctcccaa
tcagaggatccttccacagaaaagctggaccctcacctgctgaaaaagatggccttcaga
aagtctctgtctccaggggggttggtctccggaggcctgggagtcggcaaactgctgctg
cgtactggacctcctagtctgggagataccacttccacaagggctcgccctgaaacatct
gtggctgagatgctgctcaatggaaaataa
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