Cheilinus undulatus (humphead wrasse): 121524969
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Entry
121524969 CDS
T07473
Symbol
pdlim5b
Name
(RefSeq) PDZ and LIM domain protein 5b isoform X1
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
cud
Cheilinus undulatus (humphead wrasse)
Pathway
cud04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cud00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
121524969 (pdlim5b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cud04990
]
121524969 (pdlim5b)
Domain-containing proteins not elsewhere classified [BR:
cud04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
121524969 (pdlim5b)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LIM
PDZ
DUF4749
PDZ_6
LIM_FHL2-3_N
PDZ_2
Motif
Other DBs
NCBI-GeneID:
121524969
NCBI-ProteinID:
XP_041666558
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Position
17:complement(34834639..34896025)
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AA seq
608 aa
AA seq
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MSSSYSVTLAGPAPWGFRLQGGKDFCLPLTISRLTDGGKAARAKLSVGDIILSIDGISTE
SMNHLEAQNKIKACTDRLSLTLQRPSSSPKNGVPKDEPQEIIKPVPITHPTPSTAFTKPS
SQPSPAYNKTARPFGASSSVVTSVTPDAPKVATIPSASSAFTPAAPSQPQPPFPLKSSPA
PLDSTPASSVPKPGSGRSTFASPYSSSSSSNSSSPARVTAPPSHPNVPQPSVYNTPINLY
SSSNATEVAMGQRRGLLESQGLSENFNGKAFEDASPLSDASKKRLIEDTEDWHPRTGISQ
SRSFKILAQLTGTENEQVPENSGKNDAVDITAPAVHTSPAAKPFSKSPAAPRNGNIVPAS
SYKSPAAQNKPSFQPGGPSGFPKGGAAPSFGKVTNPTPKGPDRPTPQPHPQDLSSLVQRA
EHIPAGTRTPVCNKCNNVIRGPFLVAMGMSWHPEEFNCAHCHSSLAENGFVEEKGQVYCT
NCYEQFFAPTCARCNQKILGEVMNALKQTWHISCFVCCACYQPIRGNMFHMEDGQPYCEQ
DYYKLFGTNCHGCDFPIEAGDRFLEALGFTWHDTCFVCAVCSTNLEGQPFFSKKDKALCK
KHAHTVNI
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcagctacagtgtcaccctggctggccctgccccctgggggtttagactacag
ggagggaaggacttctgtctgcccctcactatctcacggctcactgatggagggaaggca
gccagagctaagctgagtgttggagacatcattctgtccatcgatggcatttccacggag
agcatgaatcacctagaggcccagaacaagataaaggcctgcacagaccgcctcagcctc
actctgcagagaccttccagctccccaaaaaatggagtacctaaggatgaacctcaagaa
atcataaagcccgtcccgatcactcaccccaccccgagcactgcattcaccaagccatcc
agtcagcccagtccagcttataacaagaccgcccggccttttggcgcaagcagcagtgtg
gtcacatctgtcaccccagatgcccccaaagtagccaccatcccctctgcatcctccgct
ttcacgccagctgccccttctcagccacagcctccgtttccgctgaagtcaagcccggct
cccctggactccactccagccagctcagtcccaaagcccggctctggtcgctccactttc
gcctctccgtactcctcttcctcctcatctaactcctcctctccagccagagtgacagcc
cccccttcccatcctaatgtcccacagccctctgtctataacacacccatcaacctgtac
tccagttccaatgctactgaggtggcgatggggcagaggcggggtcttttggagagccag
gggctgtcggaaaacttcaacgggaaagcttttgaagacgcttccccactcagcgatgcc
agcaagaagcgtctgattgaggacacagaggactggcacccgagaactggtatctctcag
tcccgctccttcaaaatcctggcccagctcactggcacagaaaatgaacaagttccagaa
aacagtggaaagaatgatgcagttgacataactgctcccgccgtgcacacctcgcctgca
gccaaaccattttccaaatctccagcagcacctagaaatggcaacatcgtccctgcgtcc
tcatacaagagtcctgcagcccagaacaagccttccttccagcctggaggtccatcaggt
ttccctaagggtggagcagctccttcttttggcaaagttaccaaccctactcccaaaggt
ccagaccgccccaccccacagccacacccacaggacctcagctctctggtgcagcgggct
gagcacatcccagctggcactcgcaccccagtgtgcaacaagtgcaacaacgttatcagg
ggccctttccttgtggccatggggatgtcgtggcaccctgaggagttcaactgtgctcac
tgccactcctccttggctgaaaacggcttcgtggaggagaaaggccaggtctactgcaca
aactgctatgagcagtttttcgcaccaacctgtgcacgctgcaaccagaagattctgggg
gaggtcatgaatgcccttaaacagacctggcacatttcctgtttcgtctgctgtgcctgc
taccagccaatcagagggaacatgttccacatggaggatgggcagccgtactgtgaacaa
gactactacaagctgtttggtacaaactgccatggctgtgacttccccatcgaggcgggg
gatagattcctggaggctctgggatttacctggcatgacacctgctttgtgtgcgcggtc
tgctccactaacctggaaggtcagccgttcttctccaaaaaagacaaagctttgtgcaag
aaacacgctcacactgtcaacatctga
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