Cheilinus undulatus (humphead wrasse): 121524981
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Entry
121524981 CDS
T07473
Symbol
rxraa
Name
(RefSeq) retinoic acid receptor RXR-alpha-A isoform X1
KO
K08524
retinoid X receptor alpha
Organism
cud
Cheilinus undulatus (humphead wrasse)
Pathway
cud03320
PPAR signaling pathway
cud04148
Efferocytosis
cud04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
cud00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
121524981 (rxraa)
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
121524981 (rxraa)
03320 PPAR signaling pathway
121524981 (rxraa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cud03000
]
121524981 (rxraa)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
cud03310
]
121524981 (rxraa)
Transcription factors [BR:
cud03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
121524981 (rxraa)
Nuclear receptors [BR:
cud03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
121524981 (rxraa)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
Nuc_recep-AF1
zf-C4
Motif
Other DBs
NCBI-GeneID:
121524981
NCBI-ProteinID:
XP_041666577
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Position
17:30566069..30730124
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AA seq
503 aa
AA seq
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METKPFLSLGFLKPQCSLAPPMQRGRSGEGCSCLTGMCPLHQRRLSSDSSGQVTSPLGSP
TSHRGMHPSLLSPTSMGPSGSLHSPISTLSSPMNGLASPFSVISSPMGPHSMNSPGMGYG
PSVSPQMFQLNSPMNSVSSTEDIKPPLGLNGVMKVPAQPSGTALSLTKHICAICGDRSSG
KHYGVYSCEGCKGFFKRTVRKDLTYTCRDNKDCVIDKRQRNRCQYCRYQKCLAMGMKREV
LLHAAVQEERQRAKDRNENEVESTSCANEDMPVEKILEAEQAVEPKTETYIETNLGVPSN
SPNDPVTNICQAADKQLFTLVEWAKRIPHFSELPLDDQVILLRAGWNELLIASFSHRSIA
IKDGILLATGLHVHRNSAHSAGVGAIFDRVLTELVSKMRDMQMDKTELGCLRAIVLFNPD
SKGLSNPSEVEALREKVYASLEAYCKQKYPEQPGRFAKLLLRLPALRSIGLKCLEHLFFF
KLIGDTPIDTFLMEMLEAPHQMT
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atggaaaccaaaccgttcttgtcattggggttcctgaagccccagtgctcattggcccct
ccaatgcagcgaggtcgctcaggagaaggttgttcctgtctgactggcatgtgtcccctc
catcagcgtcgcctatcctcagactcatcgggtcaggtgacctcacccctgggctcaccc
acatcccaccgaggaatgcacccatcactgctcagcccgacgtccatggggccctctggt
tcccttcactctcccatcagcacattgagttcccctatgaacggcctggcctcacccttt
tccgtcattagctcgcccatgggcccccactccatgaactcacccggcatgggttacggc
cccagcgtcagcccccagatgttccagttaaactctccgatgaactcggtcagcagcacg
gaggacatcaagcccccgctgggactcaacggcgtcatgaaggtgcccgcccagccctcg
ggaacggctctgtcgctcaccaaacacatctgcgccatctgtggtgatcgctcctcaggt
aaacattacggggtatacagctgcgagggctgcaaaggtttcttcaagagaacagtgcga
aaggacctgacttacacatgtcgtgacaacaaggactgtgtcattgacaaacgccagagg
aaccgctgtcagtactgccgctaccagaagtgtttagccatgggaatgaagagagaagtt
ttgttacatgcagccgttcaggaggagcgccagcgagccaaggacagaaatgagaatgag
gtggagtccaccagctgcgccaacgaggacatgcccgtggagaagattctggaagctgag
caggccgtggaacctaaaaccgaaacctacattgagactaacctcggtgtgccatccaac
tcgcccaacgatccagtaacaaatatctgtcaggcggccgacaaacagctcttcaccctg
gtggagtgggccaagaggatccctcacttctctgagctgcctctggatgaccaggtcatt
ctcctgcgagcaggttggaatgaactcctcattgcatcattttctcaccgttcgatagcg
atcaaagacgggattctgttggcgactgggctgcatgtgcaccgtaacagcgcccatagt
gccggagtgggagccatctttgacagagtgctcacagaactagtgtcaaagatgagggac
atgcagatggataagacagaactggggtgccttcgagctatagttcttttcaacccagac
tctaaaggcctgtccaaccctagcgaggtagaagctctgagagagaaagtgtacgcgtct
ttagaggcctactgcaaacagaaataccctgagcagcctggcagatttgccaagctgctg
ctgcggttaccagcgctgcgctccatcggcctcaagtgtctggagcacttgttcttcttc
aagctcatcggagacacgcccatcgacaccttcctcatggagatgctcgaagccccacat
caaatgacataa
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