Cheilinus undulatus (humphead wrasse): 121525043
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Entry
121525043 CDS
T07473
Symbol
taf1c
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit C
KO
K15214
TATA box-binding protein-associated factor RNA polymerase I subunit C
Organism
cud
Cheilinus undulatus (humphead wrasse)
Brite
KEGG Orthology (KO) [BR:
cud00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cud03021
]
121525043 (taf1c)
Transcription machinery [BR:
cud03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
121525043 (taf1c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF1C_beta-prop
TAF1C_HB
Motif
Other DBs
NCBI-GeneID:
121525043
NCBI-ProteinID:
XP_041666699
LinkDB
All DBs
Position
17:complement(16917127..16930975)
Genome browser
AA seq
1074 aa
AA seq
DB search
MDYEFPQQLFPSFYNCGPPDSVLKHCAGNWGCYDRLRPQSGSGPLSGWTFTSRHQVRGQT
WQHTEPIPVPLLSPKNTYLWPVTPPDPMDFKTHMQNFFMDHCQDAFGCMSDIVGEYFYFS
DGKLVTNRMGSVNMWKVENFLKQLDYKICHISYRSNHLDGCNTLLFDSIHSIPPEVLGGL
LHEELTEQRDHLLFSEGATGGSLAFIPFSQGCSNSRQGCLIYPGNQGLNCLNFHKVELQY
HRGGSSCVDASRGSPFSFQLKGPVRQISADSLLNQSCVAVRSDYFCGVWKFVETNEPQLL
QVVNTREVATCIGVSPHVLGEVLVASESGVVNLWTVGKGMQKIREEDSNLYFNAKSSWRW
CEFSAHPRVMLYADRTGVELTDIRMSQTSSHTLFRISNTSECRSGERLILSKYLGDSHCF
HHLVTTQYSAYIMDERFPGIPMLKMEHMMLSPPMFCHVVLGSSSSSAVGGATTTKVLLGS
QSSQEITMLQYSGGQAEACSSHGLPQALLRPRDSLRHLPAQLPHRHETANNRLSIPAAGL
TCIQTSKGKETDSSECICVLQLTEAGDIFYQILEPEQQDTSPSQTAEEETLTQQTLKDSA
APGRKTTADSQTIISETSSDEDIIGPTQAQTAQIFVAETQDLTQQGGGLSSDSSCEDSEL
GGQKRRKLKHLKLQVIVNDDPEPDQVNGLDDAKRNGKVGENNLEKPKEVKKTVSSSSTVR
AGQTQVKLSDGALISWKHWLQKLMKKSYEEKPRQRQLQHFTEPSNDILKPLARQETDSAE
EERIKSLRRDLRACMSKRLMLVHSAISTSIKAPPIEGVPESVHAEAWTDELSERLTASWQ
GEDAWRAWWDDSLGLNKEKKVAALRRKRRREKEARRASRRLELSGSFTSSLSYQAELSDF
SDSQGWSSAGSQGAWSDTGESIKSQPVGMKESGTPKAVPATPQSVRAKPDKLQTPSSSRT
LTLPPTPRVTATPPSQRKNKRPGQDILSSLFAPQVEPSQLDGYFHEEESSVQPTPPPAAS
SYQLHSSQSVSQRSLRVDLSQDTCIMPQFSQSSQGRPRLPQTSQPKKKKSRMGF
NT seq
3225 nt
NT seq
+upstream
nt +downstream
nt
atggattacgagtttccacaacagcttttcccttctttttataactgtggaccaccggat
tcagttctgaaacactgcgctggaaactggggctgttatgaccgcctgagacctcagagt
ggttctggtcctctctctggctggacgtttacatccagacatcaggttagagggcagaca
tggcagcacacagagccgataccagttccccttctgtcccctaaaaatacctacctttgg
cctgtgacaccaccagatccaatggacttcaaaacacatatgcagaacttcttcatggac
cactgccaggatgcatttggttgcatgagtgatattgtaggggaatacttctactttagc
gatggaaagttagtgacaaatcgtatgggttccgtcaacatgtggaaagtggaaaacttc
ctcaagcagttggactataaaatatgtcacatctcttataggtccaaccatctggatggc
tgcaacaccctgctgtttgactccattcactccattcctcctgaggtgctgggcggtctg
ctgcatgaggagctgactgagcagagggaccacctgctgttctctgaaggagccacaggg
ggctctctggccttcattccattctcacagggctgcagcaactctcggcagggatgcctt
atttatcctggaaaccagggactgaactgcctcaacttccacaaggtggagctgcagtac
cacagaggaggatcttcctgtgtggatgccagcagaggcagcccattcagcttccagctc
aaaggcccagtcagacagatcagcgcagattcgcttttaaaccagagttgtgttgctgtg
cggtcagattatttctgtggagtttggaagttcgttgaaacaaatgagcctcagctgctg
caggtcgtcaacactagagaagtcgcaacctgcattggtgtcagtcctcatgttttaggt
gaagttctggtggcaagtgagagtggagtggtgaatctgtggactgtcggtaaagggatg
cagaagatacgggaagaagacagcaacctgtactttaatgccaagtcttcatggcgatgg
tgcgagttctctgctcaccctagggtgatgctgtatgcagacaggacgggggtggagctc
acagacattcggatgagtcaaaccagcagtcacactctgtttcgtatcagcaacacctca
gaatgtcgaagtggagagagactcattctgtccaaatatctgggagattcccactgcttc
caccaccttgtcactacccagtattcagcctacatcatggacgagcgtttccctggaatt
cccatgcttaagatggaacacatgatgctgtccccgcccatgttttgtcatgtggttctt
ggctcctcctcctcttctgctgtaggaggggctacaaccaccaaggttctgttgggttct
cagagttctcaggagatcacgatgctgcagtactcaggaggccaagctgaggcctgctcc
agtcatggtcttcctcaggctctgctcagacccagagacagcctcagacatcttccggct
cagcttcctcatcgccatgagactgcaaacaaccgcttgtcaatacctgcagcaggtctg
acttgtatccagacaagtaaaggaaaagaaacagacagcagtgagtgtatctgtgtcctc
cagctgacagaggcaggagatattttctaccaaatccttgagccggagcagcaggacacc
tctccatcccaaacagcagaggaagaaactttgacccaacagactctgaaagattccgca
gcaccaggaagaaaaacaacagcagattctcaaacgatcatatcagaaacgtcaagtgat
gaagacataatcgggccgactcaggctcagactgctcagatatttgtagctgaaacacaa
gacttgacacagcaaggagggggtttatcatcagattcttcatgtgaggattcagagtta
ggaggacaaaagagacgaaaattgaaacatttgaagctgcaggttattgtaaatgacgat
ccagagccagatcaggtaaacggattggatgatgccaaaagaaatggaaaggttggtgaa
aataaccttgagaagcctaaagaagtgaagaaaacagtcagctcaagcagcacagttcgt
gctggtcagactcaggtgaagctcagcgatggcgctcttatctcgtggaaacactggctt
cagaaactgatgaaaaagagttacgaggaaaaacctcgccagcgtcagctgcaacacttt
acagaaccatctaatgacatcctcaagccgttggcccgtcaagagacagactctgcagaa
gaagagcgcattaaaagcctgaggcgtgatctgagagcgtgcatgtccaaacgcttaatg
ctggttcacagcgccatctctacttccatcaaagctcctcctatagagggggttcctgaa
tcagtgcacgcagaggcctggacagatgagctgagtgagcgtctgacggcctcctggcag
ggtgaggacgcatggcgagcgtggtgggacgacagtttagggctgaacaaagagaagaag
gtggcagctctgaggaggaagaggagacgggagaaggaggcgaggagagcttcaagacgc
ctggagctgtcagggagcttcacatcatccctaagctaccaagcagagctttctgacttc
tctgactcgcagggctggtcctctgcgggaagtcagggagcatggtcagacacaggggag
agcatcaagtcccagcctgtgggaatgaaagaaagtgggacaccaaaagctgttcctgct
acacctcagagtgttcgagctaaaccagacaagctccagacacccagcagttcccgcact
ctgacactgccgccgacaccaagagtgaccgccacgccacccagtcagagaaagaataaa
cgaccaggacaggacatcctcagctctctgtttgcaccacaggttgaaccctcacagctt
gatggttacttccatgaagaggagagtagcgttcagccaactcctccacctgcggcctcc
tcctatcagctccacagctcccagtcagtctctcagagaagcctcagggtggacctgtcc
caggacacctgtatcatgccccagttctcccagagttcacagggacgacccaggctgccg
cagacatcacaaccaaagaagaaaaagtcacggatgggattttga
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