Cheilinus undulatus (humphead wrasse): 121525103
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Entry
121525103 CDS
T07473
Symbol
vldlr
Name
(RefSeq) very low-density lipoprotein receptor isoform X1
KO
K20053
very low-density lipoprotein receptor
Organism
cud
Cheilinus undulatus (humphead wrasse)
Brite
KEGG Orthology (KO) [BR:
cud00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cud04131
]
121525103 (vldlr)
Membrane trafficking [BR:
cud04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
121525103 (vldlr)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
EGF_CA
SGL
EGF
Motif
Other DBs
NCBI-GeneID:
121525103
NCBI-ProteinID:
XP_041666826
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Position
17:complement(18034382..18132740)
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AA seq
864 aa
AA seq
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MVTSTPGILLLPLLLCLQHCMKVHGTKTECEANQFQCGNGRCIPSVWQCDGDEDCTDGSD
ESSCVKKTCAELDFVCRNGQCVPKRWHCDGEPDCEDGSDESLEICHTRTCRVNEFSCGAG
STQCIPIFWKCDGEKDCDNEEDEVNCGNVTCAPNEFTCASGRCISKNFVCNGEDDCGDGS
DEVDCAPSSCSPSEFQCGNSSCIPASWVCDDDVDCQDQSDESPSRCGRHPTPPAKCSSSE
MQCRSGECIHKKWRCDGDPDCKDGSDEANCPVRTCGPDQFKCDDGSCILGSRQCNGLRDC
SDGSDEVSCKNMTQCNGPEKFKCRSGECIEMSKVCNKARDCPDWSDEPIKECNLNECLLN
NGGCSHICKDMVIGFECDCTPGLQLIDHKTCGDINECLNPGICSQICINLKGGYKCECHN
GYQMDPTTGVCKAVGKEPCLIFTNRRDIRRLGLERKEYTQIVEQQRNTVALDADFDQQMI
FWADLGQKAIYSTVLDKRGDVSTHNKVIDNVQTPVGVAVDWIYKSLYWSDLGTKTISVAN
FNGTKQKVLFNRDLKEPASIAVDPLSGFLYWSDWGEPAKIEKSGMNGVNRQVLVASDIQW
PNGITLDLIKGRLYWVDSKLHMLCSVDLNGDNRKKVLQSSDYLAHPFALTVFEDRVFWTD
AENEAIYGANKFTGSDIVTLASNLNDPQDIIVYHELIQLSGTNWCAEKGENGGCSYMCLP
APQINKHSPKYTCVCPEGQELAADGLRCRPDSSTKGPSKDAGKAIIQPPKEANVSTSIQV
DSTAKGSAAAWAILPVLLLAMAAAGGYLMWRNWQLKNQKSMNFDNPVYLKTTEEDLNIDI
TRHGANVGHTYPAISIVSTDDDIS
NT seq
2595 nt
NT seq
+upstream
nt +downstream
nt
atggtcacgtccacaccggggatccttctgctgccgctgctattatgtctccagcactgc
atgaaagtccacggtacaaagacagaatgtgaggctaaccagttccagtgtggaaatggt
cgctgcatcccgtcagtctggcagtgtgacggcgatgaggactgcactgacggcagcgac
gagagctcctgtgtgaaaaagacttgtgctgagctggactttgtgtgtcggaacggccaa
tgtgtcccgaagcgatggcactgcgacggggagccggactgtgaggacggatccgacgag
agtctagaaatctgccacacaaggacgtgtcgtgtgaatgagttcagctgcggagccggc
tccactcagtgtatccccatcttctggaaatgtgacggagagaaagactgtgacaacgag
gaggatgaagttaactgtggtaacgtgacctgcgctcccaatgagttcacatgtgcaagc
ggtcgctgcatctccaaaaactttgtgtgtaatggtgaggacgactgtggcgacggctca
gatgaggtggactgtgctccgtcttcctgcagtcccagtgagttccagtgtgggaactca
tcatgtatcccagccagctgggtgtgtgacgacgatgttgactgccaggatcagtcggat
gagtcaccgtcccgctgcggccgtcacccgacgcccccggccaagtgttcgtccagtgag
atgcagtgtcgctcgggagagtgcattcacaagaaatggaggtgtgatggtgaccctgac
tgcaaggatggcagcgatgaagctaactgtccggttcgtacctgtggaccggatcagttc
aaatgtgatgatggaagctgcatcctgggtagcagacagtgtaacggcctcagagactgc
agcgacggatcagacgaagtcagctgcaaaaacatgacccagtgtaacggtccagagaaa
ttcaagtgtcgcagtggggagtgtatcgagatgagtaaagtttgcaacaaagcccgagac
tgtccggactggagcgacgaacccatcaaggaatgcaatctaaacgagtgtctactgaac
aacggcggctgctctcacatttgcaaagacatggtgatcggctttgagtgtgactgcaca
cctggactccagctcatcgaccacaagacctgcggtgacatcaacgagtgcctaaacccc
ggcatctgcagtcagatctgcatcaacctaaagggaggatacaaatgtgagtgccacaat
ggctaccagatggatccgaccaccggagtctgcaaggctgttggtaaggagccctgcctg
atcttcactaaccgccgtgacatccgtcgtctgggcctggagaggaaggagtacactcag
atcgtggagcagcagaggaacactgtcgctctagatgcggactttgaccagcagatgatc
ttctgggctgacctgggtcagaaggccatttacagcaccgtgttggataagcgaggggat
gtcagcacacacaacaaagtgatcgataatgtccagacacctgtgggagttgctgtagac
tggatctataagagcttgtactggtctgatctgggtaccaaaaccatttctgtcgccaac
ttcaatggaaccaagcagaaagtcctgttcaacagagacctcaaagaaccagcttccatc
gctgtggatccactgtctgggtttctttactggtctgactggggcgagccagcaaagatt
gagaaatctggtatgaacggagtgaacaggcaggttctggtggcttcagacatccagtgg
ccaaatgggatcaccctggatctgatcaaaggccggttgtactgggttgactccaaactg
cacatgctctgtagcgttgacctgaatggtgacaacagaaagaaagtcctccagtcctcg
gattatctggcccatcccttcgctcttactgtttttgaggaccgagtcttctggacagac
gcggagaatgaagccatctacggggcaaacaaattcactggttcggacattgtgacgctt
gcaagcaacctgaacgacccccaggacatcattgtgtaccatgagctgatccagctgtca
ggtactaactggtgtgcagagaagggtgaaaacggaggctgtagctacatgtgtctacct
gccccacaaatcaacaaacactctcccaaatacacctgcgtgtgtccagagggacaggag
ctggctgctgatggtttacgctgcagacctgactcttctaccaaaggtccctcaaaggat
gctgggaaagctataatccagccacccaaagaggccaatgtgagcacatcgatccaggtg
gactcaacagctaaaggatcggctgctgcctgggccatactgcctgtcttgctgttagca
atggctgcagcaggcggttacctgatgtggaggaactggcagctgaagaaccagaagagc
atgaactttgacaacccagtctacttgaagaccacagaagaagaccttaacatagacatc
acccgacacggcgccaacgtggggcacacatacccagctatttctatagtgagcacagat
gacgatatatcatga
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