Cheilinus undulatus (humphead wrasse): 121525792
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Entry
121525792 CDS
T07473
Symbol
scaf8
Name
(RefSeq) SR-related and CTD-associated factor 8 isoform X1
KO
K13191
RNA-binding protein 16
Organism
cud
Cheilinus undulatus (humphead wrasse)
Brite
KEGG Orthology (KO) [BR:
cud00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cud03021
]
121525792 (scaf8)
03041 Spliceosome [BR:
cud03041
]
121525792 (scaf8)
Transcription machinery [BR:
cud03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
121525792 (scaf8)
Spliceosome [BR:
cud03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
121525792 (scaf8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
RRM_1
Transformer
DUF3525
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
121525792
NCBI-ProteinID:
XP_041667857
LinkDB
All DBs
Position
18:complement(29893064..29930449)
Genome browser
AA seq
1449 aa
AA seq
DB search
MEAVKAFNNELYSLNEYKPPISKAKMTQITKSGIKAIKFYKHVVQSVEKFIQKCKPEYKV
PGLYVIDSIVRQSRHQFGTEKDVFAPRFSKNIIATFQHLYRCPSDDKSKIVRVLNLWQKN
AVFKSDIIQPLLDMAAGIPPPSVTPVMPSSAAPVNNTTPGTPATPATPANIVQSLPDWAS
QITNTDTVAAVAQILQSPQGQQLQQLVQSLQMQQQKPQPSLLQALDAGLVVQLQALTAQL
TAAATANSLNPLEQRVSSFNKKLLGPFDFGNDSERGEESKKDTSSQLPMVTEPINSSLFH
QLAEQLQQQNLEQFQKQLLEHQQHQQKALSLEGQDSIFGQENSVATGQSSSQPQLPEQEN
KVDDSIDNQQQDMDLDEGPDGMEEEIFDADEKKIGSTRSRTRSRSRSRSPKRRRSRSRSG
SRKRKHRKRSRSRSRDRKRKSSRSYSSERRAREREKERQKKGLPPIRSKTLSVCSTTLWV
GQVDKKATQQDLTNLFEEFGQIESINMIPPRGCAYICMVHRQDAYRARQKLSTGSFKIGS
KIIKIAWALNKGVKQEYKQFWDVDLGVTYIPWEKVKLDDLDGFAEGGIIDQETVNDEWEA
AKNAEPAKEAISLPVSAETTAVSNTQTETFNQQVTMMPVQLPVAQAVPSAVGLVPPAFPV
AMGMPPPGYGPPPPFIRAGFNASQPPPGFMQAAQTAGMASATTSLVQPSVATSQESMKDS
PFGAMIPPTSTIPGGFMASAIPGAGVFNPVGVQTQQASNDKTAQPAEGMDAAAELTLQGM
QNAVRSGMGLLGMHPTSLTHPLHQSGLAQQRMPGLLPLDVRPNLLQPGAAARFPLLMQQG
PAQQAAGLLDSALQAQAQARARAPFSQLDPFNRAPTLANENLSKTEDESSSGADEGKDQD
YRFPPMEKQSTGLLRTPPPEHREPLGGGGPGVSGGGRPPLLQTPGTQPSRTSLVGRLQAL
AGFTPDSRWNQTRGDFDERDGMRGGIPAPGGPKGFQEDRPTPGQNFPNRFDSRPGTTGGA
AGGPGNAGAAGGPQPWNRGGAAPFDSELHQDLDDRRRPWDRQRDRDERDFDFRREMNGNR
HSRERERERERERERERERDRDRDRERGRDRTREHERDRDRDKERDRERDRERGGWTPLL
PLPTPLLPTPPLNPNLSLNQGKLLAPLKLNPQIQSRFQSPLLPQAQAKPPLLGLNQPLPH
PQIKSPAPSQSQAAEPQPEAEPETPVPSETPPTQSPTPAQSPEPSSDSKGQSPVTEAPIQ
IESSPPTVIPPQTGSPTQPMAQSPSKTSPDTETPCQGSPLVEASPQDSPVAFTQAASPPE
ETTHSLEEQESPQKDEEEPQERAPSPQPQWVNGSGTDNSTVAELTPEASIEPSPEVSPTA
SPEPSKEPSSDLVLPESEAEEQEEEQQQQQQEEQEKLGSPKDVDNEQSEPMEEAASQPVV
DTVTDTEGT
NT seq
4350 nt
NT seq
+upstream
nt +downstream
nt
atggaggccgtcaaagcatttaacaatgagttgtactcattgaatgagtacaagccgccc
atctccaaggccaagatgacacagatcaccaagtctggaatcaaggctattaaattttac
aagcacgttgtccagagtgtggagaaattcatacaaaagtgcaaaccagaatacaaggtc
ccaggactgtacgtcatcgactcgattgtcagacagtcacgacaccagtttggaacagag
aaggatgtttttgctccacgcttcagcaagaacattattgcaacgttccagcacctctat
cgctgtccctcagatgataagagtaagatagtgcgagtactgaacctttggcaaaagaat
gcagtcttcaagagtgacatcatccagcctttgttggacatggctgcaggaattccccct
cccagtgtcacacctgtcatgcccagcagtgctgctcctgtcaataacactacacctggt
acccctgcaaccccagctacccctgccaacatagtccagagtctgcctgattgggcttcc
cagattaccaacacagacactgttgctgctgtggcacagatcctacagagtcctcaagga
caacagctgcagcagctggtacagagtctgcagatgcagcagcagaagccccagccgtcc
ctgctgcaggccttggatgctggcctggtagtgcagttgcaagcactgacggctcaactt
actgctgctgctacagcaaatagcctcaacccactggagcaaagggtctcctcttttaat
aagaagctccttggccctttcgattttggaaatgattcagagcgtggtgaagaatcaaaa
aaggacacgtcatctcaactgcccatggtaacagagcccatcaacagctccctcttccat
cagctggctgagcagctacagcaacagaacctggagcagtttcagaagcagcttctagag
caccagcagcaccaacagaaggcattaagcctagaagggcaggactcaatctttggccaa
gaaaactcagttgcaactggtcagagtagcagccagccacagctccctgagcaagagaac
aaggtggatgactccattgacaaccaacagcaggacatggacctggacgagggccctgat
ggtatggaggaagagattttcgatgcagatgagaagaagattggaagtacacgatccaga
acacgctcaaggtcgcgctctaggtctccgaagaggagaaggtccagatcccgctctggc
tcacgcaaacgtaaacatcgtaagaggtcacgttcccgctccagagaccgcaagagaaag
tcctcacggtcgtactcaagtgaaagacgtgcccgagagcgggagaaggaacggcagaag
aaaggactgcctcccatacgatcaaagaccctgagtgtgtgcagcacaactctgtgggtg
ggccaggttgacaaaaaggccactcagcaggatcttaccaacttatttgaagaatttggt
cagattgagtcaatcaatatgatccctcccagaggctgcgcctacatctgtatggtccac
agacaggacgcataccgagcccgccagaagctcagcactggctcctttaagattggctcc
aaaatcatcaagattgcgtgggctctgaacaagggagtaaagcaagagtacaagcagttt
tgggatgtcgaccttggcgtcacctacataccatgggagaaggtgaagctggatgacctt
gatggctttgctgagggaggaatcattgaccaggagacagttaatgatgaatgggaggca
gctaagaatgcagagccagcaaaggaggctattagtctgccagtaagcgctgagactaca
gctgtatctaacacccagactgagaccttcaaccagcaggtcaccatgatgcctgtgcag
ctgccagttgcacaggctgttcctagtgcagtaggtttggtaccgccagccttccctgtt
gctatggggatgcctccaccaggctatggaccaccaccaccctttataagggctggcttt
aatgcctcacagccaccaccaggttttatgcaggcagcacagacagcaggaatggcctca
gcaactacttctctagtgcagccttcagtggcaactagccaggaatcaatgaaggattcg
ccattcggtgcgatgattcctccaaccagcactattcctggtggcttcatggcctcagcc
atccctggagctggtgtgttcaacccagtgggagtccaaactcagcaggcatcaaatgat
aagacagcccaacctgcagagggtatggatgctgctgcagagctcacactgcaaggcatg
cagaatgcagtccgcagtgggatgggtctccttggcatgcaccctacatccctcacacac
ccactgcatcagtcaggtctggctcagcagaggatgccaggcctgctacctctggatgtg
cgacctaatctcctccaacctggggcggccgcccgcttcccactccttatgcagcaggga
ccagcccagcaggctgctggcctccttgacagtgccctccaggcccaggcccaagcccgt
gccagggctcctttctctcagctagaccctttcaacagggctcctaccttagccaatgaa
aacttatccaagacagaagatgagtcatcatctggagctgatgagggcaaagaccaggac
taccgtttccctcccatggagaagcagagcactggtttgctgaggacccctccaccagag
cacagggagccccttgggggtggtggaccaggggtcagtggaggaggcaggcctcccttg
cttcagaccccagggacacagccttcaagaaccagcctggtaggacgtctgcaggctctt
gcaggcttcacccctgatagtcgctggaaccagaccagaggggactttgacgaacgagat
ggtatgcgaggaggtataccagccccaggtggcccaaaaggcttccaggaagaccgtcct
acacctgggcagaactttcccaaccgcttcgacagccgacctgggacaacaggaggagca
gctgggggaccagggaatgcaggagctgctggtgggccacagccctggaaccgtggtggt
gcagccccctttgacagtgaactacatcaagacttagatgaccgtaggcgcccgtgggac
aggcaaagagacagagatgagagagattttgacttcaggagggagatgaatggtaaccgc
cacagccgagagagggagagagagcgggagcgagaacgggaacgtgagagagagagagat
agagatagagatagagagcgaggccgagatcgcaccagagagcatgaacgtgacagagat
cgcgacaaagagagagaccgtgaaagggatcgtgagcgtgggggctggacacctcttctc
cctctgcctacacctctcctcccaactccacctcttaatcccaacctgtccctcaatcaa
ggcaaactacttgcaccactcaaattaaacccccagattcagtcccgatttcagtctcca
ctcctgcctcaagctcaggcaaagccccctctgttgggtctgaatcagcccttgcctcac
cctcagattaagtctccagctccatcacagagccaagcagctgagccacagcctgaagca
gagccagaaaccccagtcccatctgagacacctccaacacagtcaccaacccctgcccag
tcacctgagccatcatcagacagcaagggtcagagcccagtgactgaggctcccatccag
attgagtcctcaccaccaacagtgatccctccacagacaggatccccaacccagcctatg
gctcagtccccatccaaaacttctcctgacactgagaccccatgccaaggctccccgctg
gtagaggcctccccccaggactcgcctgtggccttcactcaagctgccagcccccctgaa
gagacgactcactctctggaggagcaggagagcccacagaaggatgaggaggagccacaa
gagagagctccttctccacaaccacagtgggtcaatggatctggaacagacaatagcact
gtggctgaacttacacctgaggcctctatcgagccctcacccgaggtttctcccacagcc
tctcctgagccctctaaagagccctcctctgatttagtgcttcctgaaagtgaggctgag
gaacaggaggaggagcagcagcagcagcagcaggaggagcaggagaaacttggctctcct
aaggacgtagacaatgaacagagtgagcccatggaggaagctgcgagtcagcctgtggta
gacactgtcactgacactgaggggacataa
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integrated database retrieval system
