Cheilinus undulatus (humphead wrasse): 121526706
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Entry
121526706 CDS
T07473
Name
(RefSeq) SR-related and CTD-associated factor 4-like
KO
K13167
SR-related and CTD-associated factor 4
Organism
cud
Cheilinus undulatus (humphead wrasse)
Brite
KEGG Orthology (KO) [BR:
cud00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cud03021
]
121526706
03041 Spliceosome [BR:
cud03041
]
121526706
Transcription machinery [BR:
cud03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
121526706
Spliceosome [BR:
cud03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR proteins
121526706
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
121526706
NCBI-ProteinID:
XP_041669336
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All DBs
Position
2:41875861..41904875
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AA seq
770 aa
AA seq
DB search
MDAVNAFNMELFSMIDMKPPISRAKMMSVTKSAIKAIKLYKHVVQIVEKFIKKCKPELKV
PGLYVVDSIVRQSRHQFGVDKDVFGPRFLKNFSDTFQNLFHCPEDDKSKIIRVLNLWQKN
GVFDMDVIQPLMDMANGSVEPPPAVEVPVNPKPGTQLPVTSASDVPAVPQLPTPDALAAV
AQLFQSPHGQELQRMLQSFQQADKSVADIANNMPTPPQMPVAQLNPYNAPTEKRTSLAEK
LLDRFDYDDEPDDMMAKDATAHLQGHPENVTNQFHGQMPNAENVNPHMMGQTGGAEHIGG
VSQIERHRVPDGYPSSNEVYSRSRENSRERSSLRREGRHRGHGRRSRSRSGSRSPRRRKS
RSSSRSRRPRHRRSRSRSRERRWGSRSGSQDTNDREKDRERRQKGLPSIKSQTLSVCSTT
LWVGQLDKKTQQSDVMSLLEEFGQIESINMIPPRGCAYIVMVHRQDANTALNKLRRGSYK
VNQKPVKIAWALNKGIKSTHKKFWDVERGVTYIPWSKVKVDELESYQEGGTLDAETLNPD
WNNAKDLVKLPAVNGALESAPADGTITANIQVPPVEQTDSIRSPPAFSSPIMLSPTAMPP
GGAPFIPPEFDPAKLASTGSVKPPEKSIHDPEAEKVTPSDASTEHQLGSPAAPVMNLSSP
GVMPGPMPGPMPGPMPGPRPGMPPLHGMPNPHVPPFLPPPNMPHMPHPGMPGGPMFPPDR
FRMPMPFPPRGPPFHRPPPMGPGGMDVREGGHFQNGRPGFGGPPFPRGRW
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atggatgcagtaaacgcgttcaacatggagttattctccatgattgacatgaagcctcca
atatcccgtgctaagatgatgtctgtaacaaaatcagccatcaaagctattaagctttac
aagcatgttgtccagatagttgaaaagttcatcaagaagtgcaagccagaactgaaggtc
cctggtttgtacgtggttgattctattgttcgacagtcacggcatcagtttggtgttgat
aaggatgtatttgggcccagattcttgaagaacttctcagatacttttcagaacctgttc
cactgcccagaggatgacaagagcaaaattatccgagtcctgaatttgtggcagaagaat
ggggtgtttgacatggacgtcattcagccacttatggatatggccaacggatctgttgaa
cctcctcctgcagttgaagttcctgtcaaccccaaaccagggacacagcttcctgtcact
agtgcctcagatgtgcctgctgtgccccagctacccactcctgatgctttggctgctgtg
gcgcagctgtttcaatccccccatggtcaagagctgcagaggatgcttcagagtttccag
caggcagataaaagtgtggcagacatagctaacaacatgccaaccccacctcagatgcct
gtggcccagctcaacccctacaatgcaccgacggagaagagaacttctttagctgagaaa
ctcctggaccgatttgactatgatgatgaacccgacgatatgatggctaaagatgccact
gcccatttacaaggccatcctgaaaatgtgacaaaccagtttcacggtcagatgcccaat
gcagagaatgttaatccacatatgatgggtcagactggtggtgcagagcacattggagga
gtaagtcaaatcgaacgccacagggtgccagatggatacccctcctcgaatgaggtttat
tcacgatcacgggaaaattcaagagagcgctcgtcactgaggcgggagggcagacacaga
ggccatggcagaagatcaagatcaagatctggttccagatctccaagaagaagaaaatca
agatcatcgtcccgttcaagaaggcccaggcatcgacgttctcgctctcgctctagagaa
cggcgctggggatctcgctctggttctcaagacacaaatgacagagagaaagacagagaa
cgcagacagaaaggccttcccagcataaagagtcagacactcagtgtttgcagcactaca
ctttgggttgggcaactagacaaaaagactcagcagtctgatgtgatgtcccttttggaa
gagtttggccagattgagtccatcaatatgattcctccgaggggttgtgcttatatcgtc
atggttcacagacaagacgccaatacagctttaaacaaactcagaagagggtcatacaaa
gtcaatcaaaaacccgttaagattgcttgggctttaaacaaaggcataaaatcaactcac
aaaaagttctgggatgtggagcggggagttacttacatcccctggagcaaggtcaaggtg
gacgagttggagagctatcaagaagggggcacactggatgcagagacactgaatccagac
tggaataatgccaaggaccttgtgaagctgccagctgttaatggagcattggaaagtgca
ccagcagatgggaccataacagccaatattcaggtgccaccagttgagcagacagactcg
atcagaagtccaccagctttttcttcccccatcatgctgtcccccacagccatgcctcca
ggtggagcgcctttcatccctccagagtttgaccctgcaaagttggcatcaaccggaagt
gtaaaacctccagagaagtcgatacatgatcctgaggcagaaaaagtcactccctcagat
gccagcactgaacaccagctgggatctccagcagcaccagtaatgaacctatccagccca
ggtgtcatgcctggccctatgcctggtcccatgccaggccccatgccaggtcccagacca
ggtatgccccctctgcatggcatgccaaatcctcatgtacctcctttcctccctcctcca
aacatgccacacatgccccatccagggatgcctggaggacccatgtttccaccagacagg
ttcagaatgcccatgccttttcctcctcgtggacctcctttccatcgacctccccctatg
ggaccaggaggcatggatgtcagagaagggggacatttccaaaatgggaggccaggattt
ggtggcccccctttccctagagggagatggtag
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