Cheilinus undulatus (humphead wrasse): 121526754
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Entry
121526754 CDS
T07473
Symbol
pnn
Name
(RefSeq) pinin
KO
K13114
pinin
Organism
cud
Cheilinus undulatus (humphead wrasse)
Pathway
cud03013
Nucleocytoplasmic transport
cud03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cud00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
121526754 (pnn)
03015 mRNA surveillance pathway
121526754 (pnn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cud03019
]
121526754 (pnn)
03041 Spliceosome [BR:
cud03041
]
121526754 (pnn)
Messenger RNA biogenesis [BR:
cud03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
121526754 (pnn)
Spliceosome [BR:
cud03041
]
Complex C
Other components
EJC/TREX
121526754 (pnn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pinin_SDK_N
Pinin_SDK_memA
Toxin_trans
Motif
Other DBs
NCBI-GeneID:
121526754
NCBI-ProteinID:
XP_041669401
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Position
18:complement(34845769..34851411)
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AA seq
680 aa
AA seq
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MAVAVRSLQDQLEKAKESLKNVDDNIRKLTGRDPNESRPGQIRRLSGPMAGPGGGRGRGI
NLLRRSLSEIGSGGPPAKQRDIEGALLRLAGDQRARRDIRHDSDAEDDDDVKKPALPSSV
VATSKERTRRDLIQDQTMDEKGKQRNRRMFGLLMGTLQKFKQESNISTEKQKRRSEIEQK
LEVQAEAERKKVESEKRELFEERRAKQTELRLLEQKVELAQLQEEWTSHNKHLVKFIRTK
TKPHVFYLPGRMCSATQKLLDESTKKLNALFEERREAFAEHLSKMESRPRRQQNRDQDSN
AAAAGMDHSAEGKPAGQVVKVTGNKGLAELDEDEEEDDEEEEDRKATEKEEDRKEREKEE
LKKGEEEKEGMEVSEEGKEQKKEGEERVKDEEDREEKVEEESPQSEEMEVEGRTEQEVKS
NGEGGETDSKEGAKDLQNDKMEETPSSEATVSSQEVLNVSQPQMNLPAEEPATQPTEAPE
PESTPSFHMAPTVPGQDVIIPGLDLKDSATENQAVEEKTEDEATQKLPDTQEASNTTPAP
SKEEDSERGRKKEKESKKGRSHSNSSSSSSSGSSSSGSSSSSSGSSRSSSSSSSSSSSSS
NSSSRSRSRDSGKRKRRSSDRGSRKKGEERSHRKRGGSSGGGRDSKGSKERRKRRSEEGR
SRSSRGDREHKDRERKDKRR
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggcagtgcggagcttgcaagaccagcttgaaaaagcgaaagaaagcctgaaa
aatgtggacgataacattcgtaaattaacgggacgtgatcctaatgaatcaagaccgggt
cagatccgtcggctcagcggccctatggcaggccccggtggaggtagaggcagaggcatc
aacctgctcaggcgtagtctctcagaaatagggagcggcggccctcctgccaagcaaagg
gacattgagggagccttgctgaggctggcaggggaccagagggccaggagagacatacgt
cacgacagcgacgctgaggatgatgacgatgtcaaaaagccagcgttgccgtcgtctgta
gtagctacctccaaggagagaactcgccgagacctcattcaagatcaaactatggacgag
aagggcaaacagaggaatcggcgcatgtttggcctgctgatgggcaccttgcagaaattc
aaacaggagtccaacatctccacagagaagcaaaagagacgttcagagattgagcagaag
ctcgaggtacaggccgaggctgagagaaagaaggtggagagtgaaaagagggagctgttt
gaagagaggagagccaaacagactgagctgagactgttggaacagaaggtggaattagct
cagctgcaagaggagtggaccagccataataaacatcttgtaaaattcattcgtaccaaa
acaaagcctcatgtcttctacctacctgggagaatgtgctccgccacacaaaaactcctc
gatgaatctactaagaaacttaacgctttgtttgaggagaggcgggaggcttttgctgaa
cacctcagcaagatggagtcccgcccccggcgtcagcaaaaccgcgaccaggacagcaac
gctgcagcagcagggatggaccactcggcggagggtaagccagcaggtcaggtagtcaag
gtgacaggtaacaaggggttagcagagctggatgaagatgaggaggaagatgatgaggaa
gaggaggatagaaaggcaacagaaaaggaagaggataggaaggaaagggagaaggaagaa
ttgaagaagggggaggaagaaaaggaggggatggaggtgagtgaggaggggaaagagcag
aagaaggaaggagaggagagggtaaaagatgaagaggacagagaggagaaggtagaggag
gaaagtccacagtcagaggagatggaggtggagggtaggacagagcaggaggttaaaagt
aacggagaggggggagaaacagacagtaaggagggggcaaaagaccttcagaatgataag
atggaggaaacgccttcctctgaggcaactgtaagcagccaggaagtcttaaacgtcagt
cagccacagatgaacctccccgctgaggaaccagctactcagcccactgaggctcctgag
cctgagagcacccccagttttcatatggctcccacagtgcctggacaggatgtaatcatc
cccggccttgatcttaaggactcggcaacagagaaccaggctgtggaagagaaaactgag
gatgaagcaactcagaaactgcctgatacccaggaggcctccaacactacccctgcaccc
tcaaaggaggaggacagtgagagaggaaggaagaaggaaaaggagtcaaagaagggccgc
agtcacagcaacagctcctcctcttcctcttccggatcctcttccagcgggagctcttct
tcttcctctggatctagccgctcgtcttcttcatcatcctcctcatcatcctcttcatca
aatagcagcagccgcagtcgcagccgagacagcggtaagcgcaagaggaggtcatcagac
aggggaagtaggaagaagggagaagagaggagtcaccgcaagagaggaggtagtagtgga
ggagggagggactccaagggatcgaaggagaggaggaagcggaggagcgaggaagggagg
agcagatcgtcccggggagatagggagcataaagatagagaaaggaaggacaagagacgc
tga
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