Cheilinus undulatus (humphead wrasse): 121526761
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Entry
121526761 CDS
T07473
Symbol
dicer1
Name
(RefSeq) endoribonuclease Dicer isoform X1
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
cud
Cheilinus undulatus (humphead wrasse)
Brite
KEGG Orthology (KO) [BR:
cud00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cud03036
]
121526761 (dicer1)
Chromosome and associated proteins [BR:
cud03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
121526761 (dicer1)
microRNA pathway
RISC loading complex
121526761 (dicer1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Dicer_platform
Dicer_dsRBD
Dicer_PBD
Ribonuclease_3
Ribonucleas_3_3
Dicer_dimer
PAZ
Helicase_C
DEAD
ResIII
Cas3-like_C_2
AAA_16
dsrm
Motif
Other DBs
NCBI-GeneID:
121526761
NCBI-ProteinID:
XP_041669419
LinkDB
All DBs
Position
LG18
Genome browser
AA seq
1872 aa
AA seq
DB search
MAGLQLVTPATSPMGPFFGLPWQQEAIHDNIYTPRKYQVELLEAALEHNTIVCLNSGSGK
TFIAVLLTKELSHQIRGSYQENAKRTVFLVNSALSVAQQAAAVRTHSDLQVGEYTDLEET
SAWPDQQWSQEIMENQVLVMTCHIFLHVLRNRILELSKINLVVFDDCHLAIIDHPYCDIM
KLFEGCSGSFRILGLTASILNGKCDPSELEHKIQNLERILKSNAETATDLVVLDRYASQP
REVVLDCGPYVDKSGLSSRLQKELDEALHFLNDCNMPVCREDRDPTFISKQVLSDCRAVL
QVLGPWCADKAAGIMVRELQKYIKHEQEELNRKFLLFTDTILRKVHALCEEHFSPASLDL
KFVTPKVLRLLEILHEYKPFERQQFESVEWYNNRNQDNYVSWSDSEDEDEDEEVEAKERP
EANFPSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITGHSIGKNQPR
NKQMEVEFRKQEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSK
GRARAPVSNYIMLADSERTKAFEDDLTTYKAIEKILRNKCSKSVEVSDFEVEQVLDDDNI
LPPYVLRPEDGGPRVTINTAIGHINRYCARLPSDPFTHLAPKCRTVEMQDGRFQSTLYLP
INSPLRVPVKGPIMNCARLAEKAVALLCCEKLHKIGELDDHLMPVGKETVKYEEELDLHD
EEETSVPGRPGSTKRRQCYPKAIPECLRDSYAVPEQTYYLYVIGMVLTTPLPDELNFRRR
KLYPPEDTTRCFGILTAKPIPRIPHFPVYTRSGEVTISIELLKSGFSLTTSQLDLITRLH
QYIFSHILRLEKPALEFKPTMADSAYCVLPLNVVGDTNTLDMDFKFMEDIEKSEARTGIP
NTQYTKQNPFTFKLEDYQDAVIIPRYRNFDQPHRFYVADVYTDLTPLSKFPSPEYETFAE
YYKTKYNLDLSNLNQPLLDVDHTSSRLNLLTPRHLNQKGKALPLSSAEKRKAKWESLQNK
QILVPELCAIHPIPASLWRKAVCLPSILYRLHCLLTAEELRAQTATEAGVGAQTLPPDFR
YPNLDFGWKRSIDSKTFITCSESCGEDDEGPCTHQETLTADPDPLTQPNSHHSSPSKPGE
TPCTRNLTNGTAQVANCDDSGHQPKHLHQRDDRQCSQPGGPELQSPESIQSSTSVCVQPC
PSSSPQQPSHECTDHRNKATSVCSGAAHLPAAPQHRAEAGDSPKSLGPNPGLILQALTLS
NASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNLYRLGKKKG
LPSRMVVSIFDPPVNWLPPGYVVNQDKSSTDKLDSEEAKEELLANGRSGNEYDEEDEEEV
EEVADEAELMLKDEPKDEVNMEDDLEYYKEHIKFIDNMLLGSGAFGKKISLSGFPPPLSP
ASAPSYEWKTPKKPLHPTTAHFPSEPAPSGPPADEFDYSSWDAMCYLDPSKAGEEDDFVV
GFWNPSEENCGAELGKQSISYDLHTEQCIADKSIADCVEALLGCYLTSCGERAAQMFLCS
LGLKVLPLERGTLTSAEGQSRHTAVDQCYGWLKIPPRCMLDHPDAERTLNHLISGFENFE
KKINYTFQNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPG
VLTDLRSALVNNTIFASLAVKYDYHKYFKAISPELFHVIDDFVQFQLEKNEMQGMDSELR
RSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSRMSLETVWQVYYPMMRPLIEKFSANVP
RSPVRELLEMEPETAKFSPAERTYDGKVRVTVEVVGKGKFKGVGRSYRIAKSAAARRALR
SLKANQPQVQNN
NT seq
5619 nt
NT seq
+upstream
nt +downstream
nt
atggcaggcctacagcttgtcacccctgccacttcacccatggggcctttctttggtctg
ccgtggcagcaggaggcgatccacgataacatctacacgcctaggaaatatcaggtagaa
cttcttgaagcagctcttgaacataatactattgtctgcttgaattctggctcagggaag
acctttatagcagtacttctaacaaaagagctctcccaccaaatccggggaagttaccaa
gaaaatgccaagaggacggtttttctggtgaactcagctctgtctgtagctcagcaggca
gctgcagtccggactcactcagacctccaggtaggagagtacacagatctggaggagacc
tcagcatggcccgatcaacagtggagtcaggagataatggagaatcaggtgctggtcatg
acttgccacatattcctgcacgttctaaggaacagaatcttagagttgtctaaaatcaac
ctggtggtgtttgatgactgtcacctggccatcatagaccacccatactgtgacatcatg
aagctgtttgagggctgctcaggtagctttcgtatccttggcctaacagcttccattctg
aatgggaagtgtgacccgtcagagctggagcacaagatccagaacttggagaggatcctg
aagagcaatgctgaaactgccactgacctggtcgtcctggacaggtatgcctctcagccc
agagaggtggttctggactgtggtccctatgtggacaagagtggcctctcctctcgattg
cagaaggaactggatgaagctctccacttcctgaatgattgcaacatgcctgtctgtagg
gaggaccgtgaccccaccttcatctctaaacaggtgctgagtgactgccgggccgtgctg
caggttctggggccgtggtgtgctgacaaggcggcgggcatcatggtgcgagagcttcaa
aagtacatcaaacacgaacaggaggagctgaaccgcaagtttctgctcttcaccgacacc
atcctgcgcaaagtgcacgcgctttgtgaggagcacttctcccccgcctccctcgacctc
aagttcgtcacccccaaagtcttgcggctgctggagatcttgcatgagtacaaacccttc
gagcggcagcagtttgagagcgtggagtggtacaacaaccgcaaccaggacaactacgtg
tcctggagcgactcggaggatgaggacgaggatgaggaggtggaagctaaagagaggcct
gaagctaacttcccctcaccctttactaatatcctgtgtgggatcatctttgtggagagg
agatacaccgctgtcgtcctgaaccggctcatcaaagaggcagggaaacaggacccggag
ctggcctacatcagcagcaacttcatcactggccacagcatcggcaaaaaccagccgaga
aacaaacagatggaggttgaattcaggaaacaagaggaggtgctccgcaaatttcgtgct
catgaaaccaacctgctgatcgccaccagcattgtggaggagggtgtggacatcccaaag
tgtaacctggtggtgcgcttcgatctgcccacagaatacagatcttatgtccagtccaaa
ggccgagctcgagcccctgtctccaactacatcatgctggctgacagcgagaggaccaaa
gccttcgaggacgatctcactacctacaaggccatagagaagatcttaaggaacaagtgc
tccaagtcagtggaggtcagtgactttgaggtggagcaggttctggacgatgacaacatc
ctccctccctatgtgcttcgcccggaggatggaggtccgcgggtcactatcaacacagcc
attggacacatcaacaggtattgtgctcggctgcccagtgacccgttcacacacttggca
cctaaatgtagaactgtggagatgcaggacggacgcttccagtccacactctacctgccc
atcaactccccgctcagagtcccagttaagggtcctatcatgaactgtgccagactggca
gagaaagctgttgcactactatgctgtgagaaactccacaaaataggtgagctggatgat
cacctgatgccggtggggaaggagacggtaaagtacgaggaggagctggaccttcatgac
gaggaagagaccagcgtaccaggccgacctggctctaccaagaggaggcagtgctaccct
aaagccataccagagtgtctgcgggacagttacgccgtcccagagcagacgtactaccta
tatgtgatcgggatggtcctcaccacacctctccctgacgagctcaacttccgcaggagg
aagctctacccacctgaggacaccaccaggtgcttcggcatcctgactgccaaacccata
cctcgaatcccacatttccccgtgtacactcgctcgggtgaggtgaccatctccatcgag
ctgctaaaatccggcttctctctcaccacctcccaactcgacctcattacccgcctgcac
cagtatatcttctcccacatcctccgcttggagaaacctgcactggagttcaagcccaca
atggctgattcagcgtactgcgttctacctctgaatgttgttggggacaccaacacactt
gatatggactttaagttcatggaggacattgagaagtctgaggcacgcactggcattcct
aacactcagtacaccaagcagaaccccttcaccttcaaactggaggactaccaggatgct
gtcatcattccaaggtatcgtaacttcgaccagcctcaccgcttttacgttgctgacgtg
tacacagacttgacgccgctcagcaagttcccgtcaccggagtacgagacgtttgctgag
tactacaaaaccaagtacaacctggacctgtcgaacctgaaccagcctcttctggatgtg
gaccacacctcctctagattgaaccttttgaccccacgccacctgaaccagaagggtaaa
gctctgccgctcagcagtgcagagaagaggaaagccaagtgggagagtctgcagaacaaa
cagattctggttccagagctgtgtgccatccatccaatcccagcctctctgtggaggaaa
gcagtgtgtctacccagcatcctctaccgccttcactgcctcctgacagctgaggagctc
agagctcagactgctactgaagctggagtcggagcccagaccctcccccctgacttcagg
tatccaaacttggactttggctggaagagatccatcgacagtaaaaccttcatcacatgc
tccgagtcctgtggggaggatgacgagggtccctgcacacaccaagagactctaaccgct
gaccccgaccccctcacacaacccaacagccaccactcttctccctccaaacctggggag
accccctgcaccaggaacctaaccaacggcactgcccaggtcgccaactgtgacgacagc
ggccaccaacccaagcaccttcaccaacgtgacgatcgccaatgctcgcagcccggtggc
cccgagctgcagagccccgaatcaatacaaagctctacctcagtctgtgtgcagccctgt
cccagctctagtcctcagcagcccagtcatgaatgtacagaccacagaaataaagctacc
tcagtctgcagcggggcagcccacctccctgctgccccccagcacagagccgaggcgggg
gactcccccaaaagcctggggccgaacccgggccttatcctgcaggccctgaccctatcc
aacgccagcgacggcttcaacctggagaggctggaaatgctgggagactctttccttaaa
catgccatcaccacgtatctgttctgcacctaccctgacgctcatgagggacgactcagc
tacatgaggagcaagaaggtgagtaactgtaacctgtaccgtctggggaagaagaaaggt
ctccccagcaggatggtggtgtccatctttgaccccccagtcaactggctgcctcccgga
tacgtggtcaaccaggacaagagcagcacggacaaactggactcagaggaggccaaagag
gagcttctagccaacgggcgctctggaaacgaatacgatgaagaggatgaggaggaggtc
gaggaggtggccgatgaggctgagttgatgctgaaggacgagcccaaggatgaagtgaac
atggaggatgacctggagtactacaaggagcacatcaagtttattgacaacatgctcctg
ggatctggagcctttgggaagaagatctctctgagcggcttccctccccctctcagccct
gcctctgcaccttcatacgagtggaagacgcccaagaagcccctccatcccaccacggcc
cacttcccctctgagccggcgcccagtggaccccctgctgacgagtttgactatagctcc
tgggacgccatgtgctacctggaccccagtaaggctggagaagaggacgactttgtggtt
ggcttctggaatccgtcggaggagaactgtggagccgagctggggaagcagtctatctcg
tacgaccttcacacggagcagtgcatcgctgacaagagcatcgccgactgtgtggaggcg
ctgctgggctgctacctgaccagctgtggagagagagcggctcagatgttcctctgctcc
ctgggtctcaaggtgttgccgttggagagagggaccttgacgagtgcagaggggcagagc
cggcacacagctgtcgaccagtgctatggctggctgaagatccctccacgctgcatgctg
gaccatccggatgcagagcggaccctcaaccacctcatctctggctttgagaactttgaa
aagaagatcaactatacctttcagaacaaggcttacctgctgcaggccttcacccatgcc
tcataccattacaacaccatcacagattgttaccagcggctggagttcctcggagatgca
attctagactacctcataacaaagcacctttatgaagacccacggcagcactcccctggc
gtgctgacggacctgcgctctgctctcgtcaacaacaccatctttgcctctctggccgtc
aagtacgactaccacaagtacttcaaggcaatctcgcctgagctgttccatgtcatcgac
gactttgtgcagtttcagctagagaagaacgagatgcagggcatggactctgagctgcgc
cgctctgaagaagacgaggagaaagaggaagacattgaggtcccgaaggccatgggggac
atctttgagtctttagctggagcgatctacatggacagcaggatgtccctggagactgtg
tggcaggtttattatccaatgatgaggcctctcatagagaaattttctgccaatgtgcca
cgctctcctgtgagggagctgctggagatggaaccagaaactgccaagttcagccctgca
gagaggacgtacgacgggaaagtccgggtaacagtggaggtcgtcggtaagggcaagttc
aaaggagttggccgcagctaccggattgccaagtcggcagcggcacgtcgagctctgcgc
agcctcaaagccaatcaacctcaggtccaaaacaactga
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integrated database retrieval system
