Cheilinus undulatus (humphead wrasse): 121527332
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Entry
121527332 CDS
T07473
Symbol
trim55b
Name
(RefSeq) tripartite motif-containing protein 55b
KO
K10654
tripartite motif-containing protein 55
Organism
cud
Cheilinus undulatus (humphead wrasse)
Pathway
cud04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cud00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
121527332 (trim55b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cud04121
]
121527332 (trim55b)
Ubiquitin system [BR:
cud04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
121527332 (trim55b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4
RING_XB3-XBAT31
zf-RING_5
zf-B_box
zf-RING_2
zf-C3HC4_4
zf-C3HC4_3
zf-RING_6
Sina_RING
NSRP1_N
MTCP1
PPP1R21_helical
Prok-RING_4
Zn_ribbon_FGT1_2
zf-RING_10
zf-RING_11
DUF1451
Motif
Other DBs
NCBI-GeneID:
121527332
NCBI-ProteinID:
XP_041670197
LinkDB
All DBs
Position
19:complement(5789140..5801452)
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AA seq
369 aa
AA seq
DB search
MNTMDNLEKQLICPICLEMFTKPVVILPCQHNLCRKCANDVFQASNPYLPTRAGSVTSGG
RFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDMFKQESSSSKPAPERKEETPMCDVHEDE
KINIYCVTHGVPTCSMCKVFGNHKDCEVAPITSIYQTKKTELSDGITMMVATNDRMQGII
SQLEEACRAIEENGRRQKTLVCEKFDQLYSILEEKKRQMSQKVTAEQEEKLNYIRGLTRK
YGDHLEESCKIVEKGIQTMEEPEMALFLENTKPLLKKIAEASSIAHLDKVERGYENMDHY
SANFKKEGKALRSIDFIQDDDDDDEEDEDGEAGAEDGEGAQTVTSASVQPSAPQQTNSSP
SAAKSAAST
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgaataccatggataacttggagaagcagctgatttgtcccatatgtctggaaatgttt
acaaagcctgtggtcattctaccctgccagcacaacctctgcagaaaatgtgccaatgat
gttttccaggcgtctaatccataccttccaacaagagcgggctcagtgacgtctggtggc
cgcttccgatgcccatcctgcagacatgaggtggttctggacagacatggtgtctacggg
ctgcagaggaacctgttggtggagaatattatcgatatgttcaagcaagagtccagcagc
agcaaaccagctccagagaggaaggaagagacgcccatgtgtgatgttcatgaggatgag
aagatcaatatctactgtgtgacccacggtgtgcccacatgctccatgtgtaaggtattt
ggaaatcacaaagactgcgaggtggcacccatcaccagcatctaccagacaaagaagacg
gagctgagtgacgggatcaccatgatggttgctacgaacgacaggatgcagggcatcatc
agtcagctggaggaagcctgtcgtgctatagaggagaacggtcgcaggcagaagactctg
gtgtgcgagaagttcgaccagctgtactccatcctggaggagaagaagaggcagatgagt
cagaaggtgacagccgaacaggaagaaaagttaaactacatccggggcctgaccaggaag
tacggggatcacctggaagagagctgtaagattgtggagaaggggatccagacgatggag
gagccagaaatggccttattcctagagaacaccaagcctctcctcaaaaagattgcagaa
gcatcaagcatagcgcatttagacaaagttgagcgtggttacgagaacatggatcactac
agcgccaacttcaagaaagaggggaaggccctgcgcagcatcgacttcatccaagatgat
gacgatgacgacgaagaggatgaggatggagaagccggcgcagaagatggagagggggca
cagactgttacatccgcctccgtccaaccttctgccccccagcagacaaactcctccccg
agcgcagccaagagcgcagcctcgacctag
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