KEGG   Cheilinus undulatus (humphead wrasse): 121528363
Entry
121528363         CDS       T07473                                 
Symbol
snrpe
Name
(RefSeq) small nuclear ribonucleoprotein E
  KO
K11097  small nuclear ribonucleoprotein E
Organism
cud  Cheilinus undulatus (humphead wrasse)
Pathway
cud03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cud00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    121528363 (snrpe)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cud03019]
    121528363 (snrpe)
   03041 Spliceosome [BR:cud03041]
    121528363 (snrpe)
   03032 DNA replication proteins [BR:cud03032]
    121528363 (snrpe)
Messenger RNA biogenesis [BR:cud03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    U7-dependent histone pre-mRNA processing factors
     121528363 (snrpe)
Spliceosome [BR:cud03041]
 Complex A
  U1 snRNP components
   Sm proteins
    121528363 (snrpe)
  U2 snRNP components
    121528363 (snrpe)
 Complex B
  U1 snRNP components
    121528363 (snrpe)
  U4/U6.U5 tri-snRNP components
    121528363 (snrpe)
 Complex C
  U2 snRNP components
    121528363 (snrpe)
DNA replication proteins [BR:cud03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     121528363 (snrpe)
SSDB
Motif
Pfam: LSM Hfq DUF777
Other DBs
NCBI-GeneID: 121528363
NCBI-ProteinID: XP_041671733
LinkDB
Position
3:complement(5159588..5165194)
AA seq 92 aa
MAYRGQGQKVQKVMVQPINLIFRYLQNRSRIQVWLYEQVNMRIEGCIIGFDEYMNLVLDD
AEEVHMKTKNRKPLGRIMLKGDNITLLQSVSN
NT seq 279 nt   +upstreamnt  +downstreamnt
atggcgtacagaggacaaggacagaaggtccagaaggttatggttcagcccattaaccta
attttcaggtatctacaaaatcgctctcgtatccaggtctggctgtatgaacaggtgaac
atgaggatagagggctgcattattggttttgatgagtacatgaacctggttcttgatgat
gctgaggaagtccacatgaagactaagaacagaaagcctctggggaggatcatgttgaaa
ggagacaacattaccttgctgcagagtgtgtctaactag

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