KEGG   Cheilinus undulatus (humphead wrasse): 121528796
Entry
121528796         CDS       T07473                                 
Symbol
msh2
Name
(RefSeq) DNA mismatch repair protein Msh2
  KO
K08735  DNA mismatch repair protein MSH2
Organism
cud  Cheilinus undulatus (humphead wrasse)
Pathway
cud03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:cud00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    121528796 (msh2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cud03400]
    121528796 (msh2)
DNA repair and recombination proteins [BR:cud03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     121528796 (msh2)
SSDB
Motif
Pfam: MutS_V MutS_III MutS_IV MutS_I MutS_II AAA_27
Other DBs
NCBI-GeneID: 121528796
NCBI-ProteinID: XP_041672333
LinkDB
Position
20:24089096..24109857
AA seq 935 aa
MAVQPKQNLSMDSAAEHGFLNFIFSMPEKPDTTFRIFDRNDYYTVHGKDAIFAAKEVFKT
NGVIKYLGSGSRKLESVVLSKLNFEAFVRDLLLVRQYRVEVYKNHSKSSKEHDWKVEYKA
SPGNLTQFEEILFGGGAGAEGCAGVVAVRFATGADGQRVVGVGYVDAAQRMMGVCEFPDN
EIFSNLESLLVQISPKECLLAQGEGNTDGSKLREVVQRGGMLVSDRKRADFSSKDMVQDL
NRLLRAKRGETVASNTLPELDKQVAMSCLACVVRFLELLSDESNFNSFSLTSLDLGQYMR
LDNAAVRALNLFQGSPDDTSGAHSLAGLLNKCRTPQGQRLVNQWIKQPLMDKTKIEERLD
LVESFVCDSELRQTCQEDLLRRFPDLHRLAKKFHRHSATLQDCYRVYQAVSHIPALNAAL
ERYNGSYQVLLMAEFLSPLRDLQTDFVKYQEMIETTLDMNQIDHHEFLVKASFDPVLSEL
REKMDDLEKSMQAVLNSAARELGLEAGKTVKLESNAMLGFYLRVTCKEEKSLRNNKKFTT
LDVQKNGVRFTNSKLSSFNEEYTKNREEYEEAQNAIVKEIINISSGYVDPLQTLGDVIAQ
LDAVVSFAVASVSAPVPYVRPCLLADGSRRMELKQARHPCMETDADTAFIPNDISFVQGE
KSFYIITGPNMGGKSTFIRQVGVIALMAQIGCFVPCEMAELSVIDSILARVGAGDSQVKG
VSTFMSEMLETAAILRSASENSLIIIDELGRGTSTYDGFGLAWAISEHIASKIGCFCLFA
THFHELTALAAQQPSVHNLHVTALTTHNTLTMLYRVKPGVCDQSFGIHVAELACFPPSVV
AMAKEKADELEEFQETATEKSEQDEEPQAKRRREEKQVGESLIHDFLEEVKSLPAATMSD
EEVKAALRRMKAELVAKNNVYITEILARCAQTKTA
NT seq 2808 nt   +upstreamnt  +downstreamnt
atggcggtgcagccgaagcagaatctgtctatggacagcgcagcggagcatggctttcta
aactttatattctccatgccggagaaaccggacacaactttcaggatatttgaccgcaac
gactactacaccgttcacgggaaagacgctatattcgcggcgaaggaagtttttaagacg
aatggggttatcaaatatttgggctcagggagtcgtaaactggaaagtgtggtcctgagc
aagctgaactttgaggcctttgtcagagacctgctgctggtgagacaatacagagtggaa
gtgtacaagaaccacagcaaaagcagcaaggagcatgactggaaggtcgagtacaaggcc
tctccaggaaacttgactcagtttgaggagattctgttcggtggaggagctggagcagag
ggatgtgcaggagtcgtagctgtgcgtttcgctaccggagctgatggacagcgcgtagtc
ggggtcggctatgtggacgcagctcagcggatgatgggagtgtgcgagttccccgacaat
gagatcttctcgaacctggagtctctacttgtccaaatcagccctaaagagtgtctgtta
gcgcagggcgaaggaaatacagatggcagtaaactacgagaggtggtgcagcgtggtggc
atgctggtctctgacaggaagagagcagacttcagcagtaaagacatggtgcaggatctt
aaccggctgctgagggccaagagaggagagacggttgccagcaacacgctgcctgagctt
gacaaacaggtggcgatgtcatgcttggcctgcgttgtgcgtttcctcgagcttctctct
gacgagtcaaactttaactcgttcagtctgacctctctggacctcggtcagtacatgaga
cttgacaacgccgcagtgagggctctgaacctcttccagggatcaccagacgacaccagt
ggagctcactcattggccggtctgttgaataagtgtcgtacgccgcagggtcagcgtctg
gtcaaccagtggatcaaacagccactcatggacaaaactaaaatagaggaaaggttggac
ctggtggagagcttcgtgtgtgactcggagctgaggcagacctgtcaggaggacctgctg
cgaaggtttcctgaccttcaccgtctggccaagaagttccaccgccactctgcgactctg
caggactgttaccgtgtttaccaggcggttagccacatccccgccctcaatgcagcgctg
gagagatacaacgggagctaccaggttttgttgatggcagagttcctctctcctctcaga
gacctgcagacggactttgttaaatatcaagagatgattgaaaccactctggacatgaac
cagattgaccaccatgagttcctggtgaaggcgtcatttgatcctgtgctgagtgagctg
agagaaaagatggatgatctagagaagagcatgcaggctgtcctgaacagtgcagccaga
gaactgggcctagaggccggaaaaacggtgaagctggagtccaacgccatgctgggtttt
tacctgagagtcacctgcaaggaggagaagagtctgaggaacaataagaagttcaccaca
ttggacgttcagaagaacggagtccgcttcactaacagtaagctgagctcctttaatgaa
gagtacacaaagaacagggaggagtacgaggaggcacagaacgccatcgtcaaagagatc
atcaacatctcctcaggttacgtggatcctctgcagacactgggcgacgtgatcgctcag
cttgatgctgtggttagtttcgcagtggcgtccgtctctgcccccgtgccgtacgtccga
ccctgtctgctggctgacggctccagacggatggagctaaagcaggcgagacatccctgc
atggagacagacgcagacaccgccttcatacccaacgacatctccttcgtccagggagag
aagagcttctacattataacaggaccaaacatgggtggaaagtccacatttatccggcag
gtgggtgtgatcgctctaatggctcagatcggctgttttgtgccgtgtgagatggcggag
ctgagtgtgattgacagcatcctggcccgggtgggagcaggtgacagccaggtgaaggga
gtgtccacctttatgtccgagatgctggagacagcggccattctccgctctgcctcagag
aactcactcatcattatcgacgagctcggcagaggaacgtccacgtacgatggattcggt
ctggcgtgggccatcagtgaacacatcgcctctaagatcggctgcttctgcctgtttgcc
actcacttccacgagctgacggctctcgctgctcagcagccgtcagtccacaacctgcac
gtcacagcactgacgacacacaacactctgaccatgctgtacagagtcaaaccaggtgtg
tgtgatcagagttttggtatccatgttgcggagctggcctgcttcccgccgtctgttgtt
gccatggcgaaagagaaggcggacgagctggaggagttccaggagacggccacagagaag
tcggagcaggatgaagaaccccaagccaagagacgacgagaagagaaacaagtgggagaa
agcctgatccatgacttcctggaggaggtgaagtcacttcctgctgcgaccatgagtgat
gaggaagtgaaggcggcgctcaggaggatgaaggcagaactcgtcgccaaaaacaacgtt
tatatcacagagattctcgcacgctgtgcccaaacaaaaacagcttga

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