Cheilinus undulatus (humphead wrasse): 121528796
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Entry
121528796 CDS
T07473
Symbol
msh2
Name
(RefSeq) DNA mismatch repair protein Msh2
KO
K08735
DNA mismatch repair protein MSH2
Organism
cud
Cheilinus undulatus (humphead wrasse)
Pathway
cud03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cud00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
121528796 (msh2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cud03400
]
121528796 (msh2)
DNA repair and recombination proteins [BR:
cud03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
121528796 (msh2)
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Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_I
MutS_II
AAA_27
Motif
Other DBs
NCBI-GeneID:
121528796
NCBI-ProteinID:
XP_041672333
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Position
20:24089096..24109857
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AA seq
935 aa
AA seq
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MAVQPKQNLSMDSAAEHGFLNFIFSMPEKPDTTFRIFDRNDYYTVHGKDAIFAAKEVFKT
NGVIKYLGSGSRKLESVVLSKLNFEAFVRDLLLVRQYRVEVYKNHSKSSKEHDWKVEYKA
SPGNLTQFEEILFGGGAGAEGCAGVVAVRFATGADGQRVVGVGYVDAAQRMMGVCEFPDN
EIFSNLESLLVQISPKECLLAQGEGNTDGSKLREVVQRGGMLVSDRKRADFSSKDMVQDL
NRLLRAKRGETVASNTLPELDKQVAMSCLACVVRFLELLSDESNFNSFSLTSLDLGQYMR
LDNAAVRALNLFQGSPDDTSGAHSLAGLLNKCRTPQGQRLVNQWIKQPLMDKTKIEERLD
LVESFVCDSELRQTCQEDLLRRFPDLHRLAKKFHRHSATLQDCYRVYQAVSHIPALNAAL
ERYNGSYQVLLMAEFLSPLRDLQTDFVKYQEMIETTLDMNQIDHHEFLVKASFDPVLSEL
REKMDDLEKSMQAVLNSAARELGLEAGKTVKLESNAMLGFYLRVTCKEEKSLRNNKKFTT
LDVQKNGVRFTNSKLSSFNEEYTKNREEYEEAQNAIVKEIINISSGYVDPLQTLGDVIAQ
LDAVVSFAVASVSAPVPYVRPCLLADGSRRMELKQARHPCMETDADTAFIPNDISFVQGE
KSFYIITGPNMGGKSTFIRQVGVIALMAQIGCFVPCEMAELSVIDSILARVGAGDSQVKG
VSTFMSEMLETAAILRSASENSLIIIDELGRGTSTYDGFGLAWAISEHIASKIGCFCLFA
THFHELTALAAQQPSVHNLHVTALTTHNTLTMLYRVKPGVCDQSFGIHVAELACFPPSVV
AMAKEKADELEEFQETATEKSEQDEEPQAKRRREEKQVGESLIHDFLEEVKSLPAATMSD
EEVKAALRRMKAELVAKNNVYITEILARCAQTKTA
NT seq
2808 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcagccgaagcagaatctgtctatggacagcgcagcggagcatggctttcta
aactttatattctccatgccggagaaaccggacacaactttcaggatatttgaccgcaac
gactactacaccgttcacgggaaagacgctatattcgcggcgaaggaagtttttaagacg
aatggggttatcaaatatttgggctcagggagtcgtaaactggaaagtgtggtcctgagc
aagctgaactttgaggcctttgtcagagacctgctgctggtgagacaatacagagtggaa
gtgtacaagaaccacagcaaaagcagcaaggagcatgactggaaggtcgagtacaaggcc
tctccaggaaacttgactcagtttgaggagattctgttcggtggaggagctggagcagag
ggatgtgcaggagtcgtagctgtgcgtttcgctaccggagctgatggacagcgcgtagtc
ggggtcggctatgtggacgcagctcagcggatgatgggagtgtgcgagttccccgacaat
gagatcttctcgaacctggagtctctacttgtccaaatcagccctaaagagtgtctgtta
gcgcagggcgaaggaaatacagatggcagtaaactacgagaggtggtgcagcgtggtggc
atgctggtctctgacaggaagagagcagacttcagcagtaaagacatggtgcaggatctt
aaccggctgctgagggccaagagaggagagacggttgccagcaacacgctgcctgagctt
gacaaacaggtggcgatgtcatgcttggcctgcgttgtgcgtttcctcgagcttctctct
gacgagtcaaactttaactcgttcagtctgacctctctggacctcggtcagtacatgaga
cttgacaacgccgcagtgagggctctgaacctcttccagggatcaccagacgacaccagt
ggagctcactcattggccggtctgttgaataagtgtcgtacgccgcagggtcagcgtctg
gtcaaccagtggatcaaacagccactcatggacaaaactaaaatagaggaaaggttggac
ctggtggagagcttcgtgtgtgactcggagctgaggcagacctgtcaggaggacctgctg
cgaaggtttcctgaccttcaccgtctggccaagaagttccaccgccactctgcgactctg
caggactgttaccgtgtttaccaggcggttagccacatccccgccctcaatgcagcgctg
gagagatacaacgggagctaccaggttttgttgatggcagagttcctctctcctctcaga
gacctgcagacggactttgttaaatatcaagagatgattgaaaccactctggacatgaac
cagattgaccaccatgagttcctggtgaaggcgtcatttgatcctgtgctgagtgagctg
agagaaaagatggatgatctagagaagagcatgcaggctgtcctgaacagtgcagccaga
gaactgggcctagaggccggaaaaacggtgaagctggagtccaacgccatgctgggtttt
tacctgagagtcacctgcaaggaggagaagagtctgaggaacaataagaagttcaccaca
ttggacgttcagaagaacggagtccgcttcactaacagtaagctgagctcctttaatgaa
gagtacacaaagaacagggaggagtacgaggaggcacagaacgccatcgtcaaagagatc
atcaacatctcctcaggttacgtggatcctctgcagacactgggcgacgtgatcgctcag
cttgatgctgtggttagtttcgcagtggcgtccgtctctgcccccgtgccgtacgtccga
ccctgtctgctggctgacggctccagacggatggagctaaagcaggcgagacatccctgc
atggagacagacgcagacaccgccttcatacccaacgacatctccttcgtccagggagag
aagagcttctacattataacaggaccaaacatgggtggaaagtccacatttatccggcag
gtgggtgtgatcgctctaatggctcagatcggctgttttgtgccgtgtgagatggcggag
ctgagtgtgattgacagcatcctggcccgggtgggagcaggtgacagccaggtgaaggga
gtgtccacctttatgtccgagatgctggagacagcggccattctccgctctgcctcagag
aactcactcatcattatcgacgagctcggcagaggaacgtccacgtacgatggattcggt
ctggcgtgggccatcagtgaacacatcgcctctaagatcggctgcttctgcctgtttgcc
actcacttccacgagctgacggctctcgctgctcagcagccgtcagtccacaacctgcac
gtcacagcactgacgacacacaacactctgaccatgctgtacagagtcaaaccaggtgtg
tgtgatcagagttttggtatccatgttgcggagctggcctgcttcccgccgtctgttgtt
gccatggcgaaagagaaggcggacgagctggaggagttccaggagacggccacagagaag
tcggagcaggatgaagaaccccaagccaagagacgacgagaagagaaacaagtgggagaa
agcctgatccatgacttcctggaggaggtgaagtcacttcctgctgcgaccatgagtgat
gaggaagtgaaggcggcgctcaggaggatgaaggcagaactcgtcgccaaaaacaacgtt
tatatcacagagattctcgcacgctgtgcccaaacaaaaacagcttga
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