Cheilinus undulatus (humphead wrasse): 121529056
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Entry
121529056 CDS
T07473
Symbol
pold1
Name
(RefSeq) DNA polymerase delta catalytic subunit
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
cud
Cheilinus undulatus (humphead wrasse)
Pathway
cud03030
DNA replication
cud03410
Base excision repair
cud03420
Nucleotide excision repair
cud03430
Mismatch repair
cud03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cud00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
121529056 (pold1)
03410 Base excision repair
121529056 (pold1)
03420 Nucleotide excision repair
121529056 (pold1)
03430 Mismatch repair
121529056 (pold1)
03440 Homologous recombination
121529056 (pold1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cud03032
]
121529056 (pold1)
03400 DNA repair and recombination proteins [BR:
cud03400
]
121529056 (pold1)
Enzymes [BR:
cud01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
121529056 (pold1)
DNA replication proteins [BR:
cud03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
121529056 (pold1)
DNA repair and recombination proteins [BR:
cud03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
121529056 (pold1)
MMR (mismatch excision repair)
DNA polymerase delta complex
121529056 (pold1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
POL3_N
REV3_N
DNA_pol_B_2
divDNApol
DNA_pol_B_exo2
Motif
Other DBs
NCBI-GeneID:
121529056
NCBI-ProteinID:
XP_041672657
LinkDB
All DBs
Position
21:complement(38661299..38677536)
Genome browser
AA seq
1105 aa
AA seq
DB search
MDYKRRNGGPFLGGASQAKRGKPGAEWEDSPSQFEEELLMFDEADMEAEDMEGQAGHDVI
PVGDLFSADLNPRWRRPQAPTLHPLSDTLVFQQIDLDYYLGATVAGMPGQSQGKVPIIRM
FGVTDTGNSVCCHVHGFAPYFYVPAPSGFKPSDLGEFKKELNNVVLKDMRSNKDNISITV
LAVDITRKENMYGYHGKRILDFLRITMAMPRLIAPAKRLLEQGFKFSHFPIQSYQSYEAN
IDFEIRFMVDSDVVGCCWIELPKGKYQVREEKSMGDTDSQYPGKVSLCQYEVDVGWTDLI
SHPAEGDWQRIAPLRVLSFDIECAGRKGIFPEADKDPVIQIASMVQRQGETEPFIRTVFT
LQSCASIVGSQILCFTQEKQMLQSWAEFLRTVDPDIITGYNIQNFDFPYLLNRAAALKVN
LFPYLGRVRGIKSVLKDANFQSKQMGRRENKTINMEGRVQFDLLQVLLRDYKLRSYTLNA
VSFHFLQEQKEDVQHSIITDLQNGNEQTRRRLAVYCLKDAYLPLRLLQKLMCVINYMEMA
RVTGVPLTYLLSRGQQIKVVSQLLRQAMKQDLVMPVVKTEGGEDYTGATVIEPEKGYYSL
PIATLDFSSLYPSIMMAHNLCYTTLLQKGSADKLGLSSEEFIKTPTGDMFVKSSVRKGLL
PEILENLLSARKRAKAELKKETDPFKRQVLDGRQLALKISANSVYGFTGAQVGKLPCLEI
SQSVTGFGRQMIEQTKQLVESKYTMSNGYQSDAKVIYGDTDSVMVKLGVGTVREAMDIGK
EAAEWVSSHFTPPIKLEFEKVYYPYLLINKKRYAGLYFSSSADTHDKMDCKGIETVRRDN
CPLVANLINTCLQKILIDRDPQGAVDHAKEVISDLLCNRIDISQLVITKELTRTAQEYAG
KQAHVELAERMRKRDAGSAPNLGDRVPYVIIKAAKGVAAYMKSEDPIYVLENNIPIDTQY
YLEQQLSKPLLRIFEPILGETKAESILLKGDHTRCKTVLTSKIGGLMAFAQKRSTCIGCK
AVLKTDVAVCDFCKKKESELYQKEIFHLNALEERFSRLWTQCQRCQGSLHEDVLCTSRDC
PIFYMRKKVQKDLDDQSKLVSRFGW
NT seq
3318 nt
NT seq
+upstream
nt +downstream
nt
atggattataaaagacgcaacggtggccctttcctgggtggagcctctcaggccaagagg
ggtaagccaggcgctgaatgggaagacagtccatcgcagtttgaggaggagttgttgatg
tttgatgaagcagacatggaggcagaggacatggaggggcaggcaggtcatgatgttatc
cctgtaggtgacctcttctcagcagacctcaatccccgatggcggcgacctcaggcccct
actctgcaccctttgtccgacacgctggtttttcagcagattgatctggactattattta
ggagcgacggttgctggcatgcccggacaatctcagggaaaagtcccgatcattcgaatg
tttggggtgaccgacactggcaacagtgtgtgctgtcatgtccacggtttcgccccttac
ttctatgttcctgctccaagtggcttcaaacccagtgacctgggtgaatttaaaaaagag
ctgaataatgttgtcctgaaggatatgaggtccaataaggacaacatctccatcactgtg
ttggctgtggacatcacccgcaaagagaacatgtacggataccacgggaaacgtattctg
gattttttgcggataaccatggcaatgcctcgtctcattgctccagcaaaacggctgctg
gagcagggcttcaagttctcacatttccccatacagagttaccaatcctacgaggccaac
attgactttgagataaggttcatggtggacagtgatgtggtggggtgctgctggattgaa
cttcccaaaggaaagtaccaagtgcgtgaagagaagagcatgggggacacggactctcag
tacccaggaaaggtgtccttgtgtcagtacgaggtggatgtgggatggacagatctgatc
agccaccctgcagaaggagactggcagaggatcgctccactcagagttctcagctttgac
atcgagtgtgcaggaaggaaagggatcttcccagaagcagataaagaccctgtcattcag
attgcatctatggtgcagcgtcagggtgagacggagcccttcatccgcaccgtgttcacc
ctgcagtcctgtgccagcatcgtgggctctcagattctgtgttttactcaggaaaaacag
atgctgcagagctgggcagagtttttgagaacggtggaccccgatatcatcacaggttac
aacatccagaactttgactttccctatttgctcaacagggcggctgctttaaaggtgaat
ttattcccctacctcggacgtgtgcgaggcatcaagtcagtcctgaaggatgcaaacttt
cagagcaagcagatgggccgcagagagaataagaccatcaacatggagggacgagttcag
tttgatctgctgcaggttcttctcagggactataaactacgctcatacacactgaatgct
gtcagtttccacttcctgcaagaacagaaggaggacgtgcagcactccataattacagat
ctacagaacggtaacgaacagacccgccgccgtttggctgtctactgcctgaaagacgcc
tacctccccctgcgattgctgcagaagctgatgtgtgtgattaactacatggagatggcc
agagtgacaggtgtgccgctcacctacctgctgtcaagaggacagcagatcaaggtcgtc
tctcagctgctgcgacaggccatgaagcaggacctggtcatgcctgtggtaaagacagaa
ggaggagaagattacaccggagcgaccgtcattgagccagaaaaagggtactacagcctt
cccatcgcgaccctggatttctcctccttgtatccgtccatcatgatggctcacaatctg
tgctacaccactctgctgcagaaaggctcagcggacaaactgggcctctcatcggaggaa
ttcatcaagactccgacaggcgatatgtttgtgaagagctctgtgaggaaaggactcctc
cctgagatcctggagaacctgctgtctgccagaaagagggccaaagcggagctgaagaag
gaaacggatccgttcaaaaggcaagtgcttgacggtcgacagctggcgctaaagatcagc
gctaactctgtctacggcttcaccggtgcccaggtgggcaagctgccctgcttagagatc
tcccagagcgtcactggatttggaaggcagatgatcgagcaaactaaacagctggtggag
tccaaatatacaatgtccaacggttatcagagtgatgccaaggtcatctatggagacaca
gactccgtcatggtgaagctcggagtcggcaccgtgagggaggccatggacatcgggaag
gaggcagcagagtgggtgtcttctcacttcacaccacctatcaaactggagtttgagaag
gtgtactacccttacctgctcatcaacaagaagcgctatgctggcctctacttctcctcc
agtgcagacactcatgacaagatggactgtaaaggcatagagactgtccgcagagacaac
tgccccctggtggccaacctgattaacacctgtctgcagaaaatcctcatagaccgggat
cctcagggtgctgtggatcatgccaaagaagtgatctcagacttgctgtgtaaccgcatt
gacatcagtcagctggtcatcaccaaggagctgacacgcacggcgcaagagtacgctggc
aaacaggcgcacgtggagctggccgagagaatgaggaagagagatgctggcagcgccccc
aatctgggagaccgagttccctacgtcatcatcaaggctgcaaaaggagtggcagcgtac
atgaagtcagaggacccaatctacgtgctggagaacaatattcccatcgacactcagtac
tacctggagcagcagctgtcaaagcctctgctgaggatatttgagcccatcctcggagag
accaaagcagagagcatcctgctcaagggcgaccacacgcgctgtaagactgtgctgacc
tcaaagatcggcggtctcatggcgtttgctcagaagaggagcacctgtatcggctgtaaa
gctgtactaaagacagacgtggctgtgtgcgatttctgtaagaagaaggagtcggagctt
taccagaaggagatctttcacctgaatgcgctggaggagcgtttctcccgcctgtggact
cagtgtcagcgatgtcagggttccctccatgaggatgtgctctgtacgagccgtgactgt
ccgatcttctacatgaggaagaaggttcagaaggatctggatgaccagagtaagctagtg
tctcgttttggatggtga
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integrated database retrieval system
