Cheilinus undulatus (humphead wrasse): 121529419
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Entry
121529419 CDS
T07473
Symbol
rfx1a
Name
(RefSeq) MHC class II regulatory factor RFX1a isoform X1
KO
K09173
regulatory factor X 1/2/3
Organism
cud
Cheilinus undulatus (humphead wrasse)
Brite
KEGG Orthology (KO) [BR:
cud00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cud03000
]
121529419 (rfx1a)
Transcription factors [BR:
cud03000
]
Eukaryotic type
Other basic domains
RF-X
121529419 (rfx1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BCD_RFX
RFX1_trans_act
RFX_DNA_binding
Motif
Other DBs
NCBI-GeneID:
121529419
NCBI-ProteinID:
XP_041673183
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All DBs
Position
21:complement(36328105..36354597)
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AA seq
1001 aa
AA seq
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MATSGYVGEIQPAAQTQGAVVTVTPGQPDGSSTPPTAPPFLAEIQTTVSTPTIVTPTGQT
THADPDASITTQKPAAGSQAQSTAQPQPAQTQYVTAEIQGSPTESGNAQSTPQYIVVTVT
EGSLHSSDSVSDSSPPPAVVQTGVPTQVVQQVQTAQQRSVVQATSQIAKTEPGTQLSVTS
LQPVHISPEFLPITMVVRDSCIEEKQQQHQIGQPESQAGASGDHFKECSERAVCFPFNVA
MGLLQFYQSTYLPFVHAEKEIRDHLAVTDPNSLPLQAPSAAMQVQQQLTSVPVQHVYTNQ
VQYVEGGDSNYTTSTIRSGTFPYTDTPLYTQTTASQYYEGQTTPGSQASTPGTPLTVSVT
TGTTGGVSMFVAQPSSAAGGAATVVTTGGTTNGAGEGAGTNGGAAGSYVIQGGYMLGSSS
GGAAGNSQNYSHTARASPATVSITEGEESSVPSADKKVQWLLDNYETAEGVSLPRSTLYC
HYLLHCQEQKLEPVNAASFGKLIRSVFMGLRTRRLGTRGNSKYHYYGLRIKAGSSLLRLM
EDQQHLAMRQQPFSQKQRLKPVHKVEGMTNGTASGASQQQQQQQQGSGQVDISTQVQQYQ
QFLDASRALPEFPDIDLQGKSLPEGIELEHIKSFQLLYREHCEAILDVMVNLQFTLVETL
WKTFWRFSQSQAGDATLSVHDESEKRLPKTCLVLLCKYEPVLRWSRDCDNSLYQGLVEIL
IPDVLRPIPSALTQAIRNFAKSLESWLTNAMMNIPEEMVRIKVTSANAFAQTLRRYTSLN
HLAQAARAVLQNTAQINQMLSDLNRVDFANVQEQASWVCRCEDRVVQRLEQDFKLTLQQQ
NSLEQWAAWLDGVVTQVLKPYQHSPAFPKAAKLFLLKWSFYSSMVIRDLTLRSAASFGSF
HLIRLLYDEYMYYLIEHRVAQAKGETPIAVMGEFASLGRGLSQLDPDKEEEEEEEEESDD
EGQELSLPPDGAVLGDESLEPPAKLARTDQRVLFTTGSADN
NT seq
3006 nt
NT seq
+upstream
nt +downstream
nt
atggccacctcaggctatgtaggtgagattcaaccagcagcccaaacccagggggctgtt
gttaccgtcacaccggggcaacctgacggcagctccacccctccaactgcccctccattt
ctggctgagattcagactactgtgtccacacctaccatcgtcacacccacaggccaaacc
actcatgcagatccagatgcctccatcaccactcagaagccggcagctggaagtcaagcc
cagtccacagctcagccccagccggcccagacacagtacgtgactgcagagatccagggc
tcccccacagagtcaggaaatgctcaaagcactcctcaatacattgttgtcacagtcaca
gagggctcccttcactcaagtgacagtgtgtcagactctagcccccctccagctgtggtg
caaaccggtgttcccacacaggtcgtccagcaggtgcagacagctcaacagaggtctgtg
gtgcaggccacctctcagatagccaagactgagccaggtacgcagctcagtgtcaccagt
ctacagcctgtccacatcagcccagagttcctccctatcaccatggtagtcagggatagc
tgtatagaagaaaaacaacaacagcaccagataggacagccagagagccaggccggggca
tcaggagaccattttaaagaatgcagtgaaagggcagtctgcttccccttcaacgtcgcc
atgggacttctccagttttaccaatcaacgtatttaccttttgtccatgcagaaaaagag
ataagagaccaccttgctgtcacagaccctaacagcctgcccctgcaggctccatctgca
gctatgcaagtccagcagcagctcacatcagtgccagtgcaacatgtgtacaccaaccag
gtgcagtatgtggaaggaggagacagcaactacaccaccagcactattcgttccggcacc
ttcccttacactgacacccccctgtacacccagaccacagcatcacagtattatgagggt
cagaccacccccggctctcaggcctccactcctggcacacctctgaccgtctctgtgact
actggcacaactgggggtgtttctatgtttgtggcccagccctcaagtgcagcgggggga
gccgccacagtggtgaccacaggtggtaccaccaatggggcaggggaaggggcaggcaca
aacgggggcgcagctggcagctacgtgatccaggggggttacatgctgggcagcagcagt
ggaggggcagctggcaacagtcagaactactcccacaccgcccgcgcctctccagccact
gtgagtattacagagggcgaggagagtagcgtgccgtcggcagacaagaaggtacagtgg
ttgctggacaactatgagacagctgaaggagtaagtctgccacgttccactctctattgc
cactacctgctgcactgccaggagcagaaactagagcctgttaatgctgcctctttcgga
aaactcatcagatctgtgtttatggggcttcgtacacgtcgtctgggcacacgtggtaat
tctaaatatcactactatgggctgaggatcaaggccggctcctctctcctccgtctgatg
gaagaccagcaacatctggccatgaggcagcagcccttctcacagaaacagagattgaag
ccagttcataaagtagaggggatgaccaatggaacagcatcaggagctagccagcagcag
caacagcagcagcaggggtctgggcaggtggacatcagcacccaggttcagcagtaccag
cagttcctggatgcatccagagcactcccagagttcccagacatcgaccttcaggggaag
tctctaccagagggcattgagctggagcacataaagagctttcagctgctttacagagaa
cactgtgaggcaattctggatgtgatggtgaatctgcagtttaccctggtggaaactctg
tggaaaaccttctggaggttcagccagagtcaggctggagatgccacgttgtctgttcac
gatgagtcagagaagcgcctcccaaagacctgcctggtgttgctgtgcaaatacgagcca
gtgctgcgctggagtcgtgactgtgacaacagcctgtaccagggcctggtggagatcctc
atccctgatgtcctcaggccaatccccagtgccttaactcaagccatccgtaactttgcc
aagagtctggagagctggctgacgaatgctatgatgaacatccctgaggagatggttcgc
atcaaggtaacgtctgccaatgcatttgcacagacgctgcgtcgctacaccagtctgaac
cacctcgcccaagcagcccgcgctgttctccagaacacggcacaaatcaaccagatgctc
tctgacctcaaccgcgtcgactttgctaacgtccaggagcaggcttcatgggtgtgccgg
tgtgaagaccgtgtcgttcagcgactagagcaagactttaagctgaccctgcaacagcag
aactctctggagcagtgggctgcatggctcgatggtgtggtcacacaagtcctgaaacca
taccagcacagccccgctttccccaaggccgccaaactgttcctgcttaagtggtccttt
tacagctctatggtgatcagggacctgaccctgaggagtgccgccagtttcggttccttc
cacctgatccgcctgctgtatgacgagtacatgtactacctgatcgagcacagggtggcc
caggccaaaggagagactcccattgctgtcatgggagagtttgccagtctaggccggggt
ctaagccagctggatcctgacaaagaagaggaagaggaggaggaggaagaaagtgatgat
gaaggtcaggagctgtccctccccccagatggggccgtgcttggagacgagtctctggag
ccgccggccaaactggcccgaactgaccagagagtcctgttcacgaccggatcagccgac
aactaa
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