Cheilinus undulatus (humphead wrasse): 121529491
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Entry
121529491 CDS
T07473
Symbol
top3a
Name
(RefSeq) DNA topoisomerase 3-alpha
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
cud
Cheilinus undulatus (humphead wrasse)
Pathway
cud03440
Homologous recombination
cud03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cud00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
121529491 (top3a)
03460 Fanconi anemia pathway
121529491 (top3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cud03032
]
121529491 (top3a)
03400 DNA repair and recombination proteins [BR:
cud03400
]
121529491 (top3a)
Enzymes [BR:
cud01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
121529491 (top3a)
DNA replication proteins [BR:
cud03032
]
Eukaryotic type
DNA Topoisomerases
121529491 (top3a)
DNA repair and recombination proteins [BR:
cud03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
121529491 (top3a)
FA (Fanconi anemia) pathway
121529491 (top3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_GRF
Toprim
Zn_ribbon_Top1
Zn_ribbon_GRF_2
zf-C2H2_10
Motif
Other DBs
NCBI-GeneID:
121529491
NCBI-ProteinID:
XP_041673326
LinkDB
All DBs
Position
21:complement(7705863..7729657)
Genome browser
AA seq
1011 aa
AA seq
DB search
MLVHFFKTYLFRSGLQRPDLLRKILSGRSYCAQQAEMHRNRGQSGMSRVSRVLCVAEKND
AAKGISEILSNGRARRREGMSKFNKIYEYEYHLFGQDVAITMTSVSGHLLALEFKAPFQK
WHSCNPVLLFDAEVEKYCPDNMIQIKRTLEKEVRQCQALVIWTDCDREGENIGYEIINVC
RAVKPNLHVFRAKFSEITQNSIRRACETLSEPDVNISDAVDVRQELDLRIGASFTRFQTL
RLQKIFPNSLSNQLISYGSCQFPTLGFVVERFKAIQAFIPETFYKIKVLHEWAEDTVEFS
WKRNRLFHHTACLVLYQICMEDPIATVTAVTSKPKSKWRPLPLDTVELEKLASRKLKISA
KETMKIAEKLYTQGFISYPRTETNMFPSNLPLRPLVEQQTHSQDWGTFAQRVLDQPGGPN
PRQGKKSDQAHPPIHPTKFTSSLQGNEGRLYEFIVRHFLACVSQDALGQETVVDINIAQE
KFSASGLMILERNYLDVYPYDRWSTKLIPVYEQGSQFQPSAIKMLDGQTSPPQLLTEADL
ISLMEKHGIGTDATHAEHIETIKSRMYVGLTADQRFLPGELGMGLVEGYNSMGYEMSKPN
LRAELEADLKLVSEGRKDKQTVLQHYIQKYKTVFIESARKAKKLDEALVPYLGEAQAITE
AEQQDMEIPLPVRKCPNCGRDMVLKKKREGNSKFLTCVGYPACKTAVWFPDSVLEVGRDE
SICPTCEPRPVHMLKFKFRRGSLPPIMPLEFVGCIGGCDETLREVLDLKYLRAGGSGGEG
GGGGGGGGYDPPPPPNPRPSLPPVPTWMPQPRPPPRGGGMDASNDAIVCNCGQSAVLLTV
RKDGPNQGRQFYKCNASTCNFFLWADEQSQQEPPMSRVAPLQTPQNSRPPRPSVGFRTNS
GGGDGGEDGGQTMCNCNQTAVMRTVQKDGPNKGRMFHTCGKPRGQQCGFFLWADENIPPS
GGFGGFNEDRVKKGRKTIGDNFTNKAPAAKKARTCGICSMPGHTRVTCPQR
NT seq
3036 nt
NT seq
+upstream
nt +downstream
nt
atgttagtacactttttcaagacatatctgtttcgatcgggactacagcggccagatctt
ctccggaagattctcagcgggagatcgtactgtgctcagcaggcagagatgcaccgcaac
cggggtcagagcggcatgagccgggtgagcagggtgctgtgtgtggccgagaagaacgac
gctgctaaggggatctctgagatcctgtccaacgggagagccaggaggagggaggggatg
tccaagttcaacaaaatctatgagtatgagtatcatctctttggtcaggatgtggcgata
acaatgacatcagtctctggacatttgctggctctggagtttaaagcaccatttcagaaa
tggcacagctgtaatcctgtgctgctgtttgacgccgaggtcgagaagtactgtccagat
aacatgattcagatcaagcgtactctggagaaagaagtgaggcagtgtcaggctttagtc
atctggactgactgtgacagagagggagaaaacattggttatgaaataatcaatgtctgc
agagcagtgaagccaaatctccatgtatttcgggcaaagttttctgaaatcactcagaac
tcgatccgtagagcatgtgagactctgtcagagcccgatgtgaacatcagtgatgctgtg
gatgttcgccaggagctcgacctgcggataggtgcatctttcacccgattccagacgctt
cgcctgcagaagatctttccaaactctctgtccaatcagctgatctcatatggcagctgt
cagtttcccacactggggtttgtggtggagcggttcaaagccatccaggctttcatacct
gagactttctacaaaatcaaagttcttcatgaatgggcggaggacactgttgagttcagc
tggaagagaaaccgtctgttccatcacacggcctgcctagtgctctatcagatctgtatg
gaggatcccatagcaaccgtcaccgcggtaaccagcaaaccaaagagcaagtggagaccg
ctgccgttagacaccgtggagctggagaaactggcgtctcggaagttaaaaataagtgct
aaagagacgatgaaaatcgcagagaaactctacacacaggggtttatcagctaccctcgc
acagagaccaacatgttcccctccaatctgccactgcgccctctggtggagcagcagact
cacagtcaagactggggtacgttcgcccagcgagtcctcgaccagcctggaggtccgaac
cctcgccagggcaagaagtctgaccaggcccatcccccgatccatcccaccaagttcacc
agctctctgcagggaaatgaaggacgtctgtacgagtttatcgtcagacacttcctggcc
tgtgtttcccaggatgctttggggcaggagacggtggtggacatcaacattgctcaggag
aagttctctgcttcaggactcatgatccttgagaggaactacctggacgtttacccgtac
gacaggtggagcaccaagctgattcccgtatacgagcagggatctcagtttcagccgtct
gcgatcaagatgttggatggtcagacgagtcctcctcagctgctgactgaagccgacctc
atctcactgatggagaaacacggcatcggcacagatgccactcacgcagagcacatcgag
accataaagagtcggatgtacgtgggtctgacggctgatcagaggtttctacccggagag
ctcggcatgggactggtggaggggtataactccatgggttatgagatgtctaaaccaaac
ctgcgtgctgagctggaggcggatctaaagctggtatcagagggcaggaaggacaagcag
accgtgctccaacattacattcagaagtataaaaccgtcttcatcgagtcagcccgcaaa
gccaagaagttagacgaagctctggtgccctacctgggagaagctcaggcgatcaccgag
gcggagcagcaggacatggagatccctctgccagtcaggaagtgtcctaactgtggacgg
gacatggtgttgaagaagaagagggaagggaacagtaagtttctgacctgtgtgggctat
ccagcgtgtaaaacagccgtgtggtttcctgattcagtgctggaggtcggcagagacgag
agcatttgtccaacctgtgagccccgccctgttcacatgttgaagtttaagttccgcaga
ggcagcctccctcccatcatgcctctggagtttgttggctgcatcggcggctgtgacgag
actctcagagaggtgctggacctgaaatacctgagagcaggtggaagtggaggagaggga
ggaggaggaggtggaggaggtggatatgacccacctcctcctccaaatcctcgaccttct
ctcccccctgtccccacctggatgccccagccgagacctccaccacgtggcggcggcatg
gatgccagtaacgacgccatcgtgtgtaactgtgggcagagtgccgtcctcctcactgtg
cgcaaagacggccctaaccaggggcgccagttctacaagtgcaacgccagcacctgcaac
ttcttcctgtgggccgacgagcagagccagcaggagccgccaatgagcagagtggccccc
ttgcagacaccacagaactcgcggccccccaggccctctgttgggttcaggaccaactca
ggagggggagacggaggggaggatggcggtcagacgatgtgtaactgtaaccagacagcg
gtgatgaggacagtgcagaaagatggaccaaacaaagggagaatgtttcacacctgcgga
aaaccacgagggcaacagtgtgggttcttcctgtgggctgacgagaacatcccaccttca
ggaggttttggtgggtttaatgaagatcgagtaaagaaggggagaaagaccatcggagac
aactttactaacaaagctcctgctgctaagaaagctcgtacctgtggaatctgcagcatg
ccaggacacacaagagtcacctgtcctcagaggtga
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