KEGG   Cheilinus undulatus (humphead wrasse): 121529625
Entry
121529625         CDS       T07473                                 
Symbol
casc3
Name
(RefSeq) protein CASC3
  KO
K14323  protein CASC3
Organism
cud  Cheilinus undulatus (humphead wrasse)
Pathway
cud03013  Nucleocytoplasmic transport
cud03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:cud00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    121529625 (casc3)
   03015 mRNA surveillance pathway
    121529625 (casc3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cud03019]
    121529625 (casc3)
Messenger RNA biogenesis [BR:cud03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     121529625 (casc3)
SSDB
Motif
Pfam: Btz
Other DBs
NCBI-GeneID: 121529625
NCBI-ProteinID: XP_041673507
LinkDB
Position
21:complement(9124266..9143804)
AA seq 777 aa
MADRRRRRRRASQDSEDDDESGSGSDSGRSGSPASKSRGRDPEPPEPTATRVEAKSDVES
ECESEDGVGEAVLSDYDSADPEENGSHSEGVEEEEEAEHFSDEEAPAAASEPKPPAADVP
VKEEEEGPQGEEEGEAEEEQGGQSKEESKAEEKGNLAGERQSGDGQESTDDPETKAGGKP
GQKLDDDEDRKNPAYIPRKGLFFEHDVRGHAQEEERPKGRNRKLWKDEGRWEHDKFREEE
QAPKSREELIAIYGYDIRNGGGPGDRTYRQRRPRQSTSPSRDKRWRDGGGERPVRSWQGG
GGGGGPNRGGAPPPSSIHPSSTAPSSVPLSSAQRNSNPSRPPPSRSRPPHQGQMHLPPQS
QYRNNESNAPQTHPRDRQGPKAPSDPTGERVSRGGRAAGGGRGGPSVVIEDVTVSQGSVR
EQDLSAVTTVAASQPGGYQSASPRRQQQEQRGSAERSTTGLAATSSASDPALQSSATTAT
NREASPPTERPVERKSYSLARRTRSRPADLGSKQPSMEESAAGGNTSSPGSVGGKNWAGD
GPGQTGGGGALAELDQDVARLSLAGQSWTQSPTSYIRSEMRGLPNPMHLPGGPPQFSSME
EMGVSSNRAKRYSSQRQRAVPEPAPPMHLGVMEGHYYEPMSYQGPIYAHGDGPAPIPPQG
MLVQPEMHLPHPGLHPHQSGGPIANPALYGGPPVSLSPGQPPQQLLPPPFYPPPGVMTFP
YPAMYPSPQGQSQVTYGGVTYYDTVQQQAQPKPSPPRRTSQPVTVKPPPPEVPFASE
NT seq 2334 nt   +upstreamnt  +downstreamnt
atggcggaccggcggcgacggaggaggcgcgcgtcccaggacagcgaggacgacgacgag
tccggttcgggttcggacagcgggaggtcggggtcgccggctagcaagagccgggggagg
gaccccgaaccaccggagccgacagcgactcgggtggaggcgaagagcgacgtggagtcc
gagtgtgagagtgaagatggagtcggagaagctgtactatctgactatgacagtgcagat
ccagaggaaaacggttcccattcagagggagtggaggaggaagaggaggccgagcatttc
agtgatgaggaagctcctgctgcagccagtgagcccaaacctcctgctgcagatgttcca
gtgaaggaggaggaggaggggccccagggagaggaggagggggaggcagaggaagagcag
ggaggacagagtaaagaggagagtaaagcagaggagaaggggaacctagccggagagagg
cagagcggtgacggacaggagtctacagatgaccctgaaacaaaggcgggaggaaaaccg
ggtcagaagctcgatgatgacgaggacagaaagaacccggcctacatcccaaggaagggt
ctgttcttcgagcacgatgtgagaggacatgctcaagaggaggagagaccaaaaggtcgg
aacaggaagttatggaaggacgagggtcgctgggaacatgacaagttcagggaggaggag
caggcaccgaagagtcgtgaggagctcattgcgatttacggttacgacatccgaaacgga
ggcggacccggagaccgaacgtatcggcagcgcagacccagacagagcacatcccctagc
agagacaagcgatggagagatggaggaggagagcgaccagtgcgatcctggcagggagga
ggaggtggaggaggtccaaaccgaggaggagctcctccgccttcatctatccatccctct
tctacagcgccctcttctgtccctctttcctccgctcagcgtaacagcaatccttccaga
cctcctccctcccgcagtagacccccccaccagggtcagatgcacctcccacctcagtcc
caatacaggaacaatgaatcaaacgcaccccagacacatcccagagaccgccaaggacct
aaagctccatctgaccccacaggagagcgagtcagcaggggagggcgagctgctggtggg
ggtagggggggtccctctgtggtcattgaggatgttactgtcagccaaggaagtgttaga
gaacaggacctcagtgctgtaaccacagtggcggcatcacagcccggtggttatcagtct
gcatcaccacggcgacagcagcaggaacaaagagggagtgccgaaagatccacgacagga
ttggctgctacttcctccgcctctgaccccgcgctgcagtcgtcagcaacaacagcgacc
aatcgggaggcctctcctcccacagagcggccagtggagcgtaagtcttactctctggct
cgcaggactcgctctcggcccgcagacctgggcagcaaacagccgtctatggaggagtct
gctgccggaggaaacacctcctcccctggaagcgtgggagggaagaattgggcaggcgat
ggccctggtcagaccggaggaggtggagcgctagcagagctggaccaggatgtggctcga
ctcagtctagcaggacagagctggactcagagccctacgtcctacatccgctctgagatg
agaggtcttcccaaccccatgcaccttcctggtggaccgcctcagttctccagcatggaa
gaaatgggtgtatcctccaatcgggccaaacgctactcctcccagcgacagcgggctgtt
ccagagccagcaccacccatgcatctgggagtgatggaggggcactactatgaacccatg
tcataccagggaccaatctacgcacatggggatggccctgcccccatcccaccgcaaggc
atgctggtccagccagagatgcaccttccccatcccggtctccatccccaccaatcaggg
ggcccgattgctaaccccgccctgtacggaggtcctcctgtttctctgtcaccagggcaa
ccacctcagcagctgctgccaccaccgttctaccctccaccaggcgttatgactttccca
tacccagccatgtacccaagtccacaaggtcagtcccaggtgacctatggtggtgtgacg
tactacgacacagtgcagcagcaggctcagcccaaaccttcgcctcccagacgtacgtct
cagcccgtcacagtcaagcccccccctccagaggtgccctttgcctcagagtga

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