Cheilinus undulatus (humphead wrasse): 121529625
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Entry
121529625 CDS
T07473
Symbol
casc3
Name
(RefSeq) protein CASC3
KO
K14323
protein CASC3
Organism
cud
Cheilinus undulatus (humphead wrasse)
Pathway
cud03013
Nucleocytoplasmic transport
cud03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cud00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
121529625 (casc3)
03015 mRNA surveillance pathway
121529625 (casc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cud03019
]
121529625 (casc3)
Messenger RNA biogenesis [BR:
cud03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
121529625 (casc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
121529625
NCBI-ProteinID:
XP_041673507
LinkDB
All DBs
Position
21:complement(9124266..9143804)
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AA seq
777 aa
AA seq
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MADRRRRRRRASQDSEDDDESGSGSDSGRSGSPASKSRGRDPEPPEPTATRVEAKSDVES
ECESEDGVGEAVLSDYDSADPEENGSHSEGVEEEEEAEHFSDEEAPAAASEPKPPAADVP
VKEEEEGPQGEEEGEAEEEQGGQSKEESKAEEKGNLAGERQSGDGQESTDDPETKAGGKP
GQKLDDDEDRKNPAYIPRKGLFFEHDVRGHAQEEERPKGRNRKLWKDEGRWEHDKFREEE
QAPKSREELIAIYGYDIRNGGGPGDRTYRQRRPRQSTSPSRDKRWRDGGGERPVRSWQGG
GGGGGPNRGGAPPPSSIHPSSTAPSSVPLSSAQRNSNPSRPPPSRSRPPHQGQMHLPPQS
QYRNNESNAPQTHPRDRQGPKAPSDPTGERVSRGGRAAGGGRGGPSVVIEDVTVSQGSVR
EQDLSAVTTVAASQPGGYQSASPRRQQQEQRGSAERSTTGLAATSSASDPALQSSATTAT
NREASPPTERPVERKSYSLARRTRSRPADLGSKQPSMEESAAGGNTSSPGSVGGKNWAGD
GPGQTGGGGALAELDQDVARLSLAGQSWTQSPTSYIRSEMRGLPNPMHLPGGPPQFSSME
EMGVSSNRAKRYSSQRQRAVPEPAPPMHLGVMEGHYYEPMSYQGPIYAHGDGPAPIPPQG
MLVQPEMHLPHPGLHPHQSGGPIANPALYGGPPVSLSPGQPPQQLLPPPFYPPPGVMTFP
YPAMYPSPQGQSQVTYGGVTYYDTVQQQAQPKPSPPRRTSQPVTVKPPPPEVPFASE
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atggcggaccggcggcgacggaggaggcgcgcgtcccaggacagcgaggacgacgacgag
tccggttcgggttcggacagcgggaggtcggggtcgccggctagcaagagccgggggagg
gaccccgaaccaccggagccgacagcgactcgggtggaggcgaagagcgacgtggagtcc
gagtgtgagagtgaagatggagtcggagaagctgtactatctgactatgacagtgcagat
ccagaggaaaacggttcccattcagagggagtggaggaggaagaggaggccgagcatttc
agtgatgaggaagctcctgctgcagccagtgagcccaaacctcctgctgcagatgttcca
gtgaaggaggaggaggaggggccccagggagaggaggagggggaggcagaggaagagcag
ggaggacagagtaaagaggagagtaaagcagaggagaaggggaacctagccggagagagg
cagagcggtgacggacaggagtctacagatgaccctgaaacaaaggcgggaggaaaaccg
ggtcagaagctcgatgatgacgaggacagaaagaacccggcctacatcccaaggaagggt
ctgttcttcgagcacgatgtgagaggacatgctcaagaggaggagagaccaaaaggtcgg
aacaggaagttatggaaggacgagggtcgctgggaacatgacaagttcagggaggaggag
caggcaccgaagagtcgtgaggagctcattgcgatttacggttacgacatccgaaacgga
ggcggacccggagaccgaacgtatcggcagcgcagacccagacagagcacatcccctagc
agagacaagcgatggagagatggaggaggagagcgaccagtgcgatcctggcagggagga
ggaggtggaggaggtccaaaccgaggaggagctcctccgccttcatctatccatccctct
tctacagcgccctcttctgtccctctttcctccgctcagcgtaacagcaatccttccaga
cctcctccctcccgcagtagacccccccaccagggtcagatgcacctcccacctcagtcc
caatacaggaacaatgaatcaaacgcaccccagacacatcccagagaccgccaaggacct
aaagctccatctgaccccacaggagagcgagtcagcaggggagggcgagctgctggtggg
ggtagggggggtccctctgtggtcattgaggatgttactgtcagccaaggaagtgttaga
gaacaggacctcagtgctgtaaccacagtggcggcatcacagcccggtggttatcagtct
gcatcaccacggcgacagcagcaggaacaaagagggagtgccgaaagatccacgacagga
ttggctgctacttcctccgcctctgaccccgcgctgcagtcgtcagcaacaacagcgacc
aatcgggaggcctctcctcccacagagcggccagtggagcgtaagtcttactctctggct
cgcaggactcgctctcggcccgcagacctgggcagcaaacagccgtctatggaggagtct
gctgccggaggaaacacctcctcccctggaagcgtgggagggaagaattgggcaggcgat
ggccctggtcagaccggaggaggtggagcgctagcagagctggaccaggatgtggctcga
ctcagtctagcaggacagagctggactcagagccctacgtcctacatccgctctgagatg
agaggtcttcccaaccccatgcaccttcctggtggaccgcctcagttctccagcatggaa
gaaatgggtgtatcctccaatcgggccaaacgctactcctcccagcgacagcgggctgtt
ccagagccagcaccacccatgcatctgggagtgatggaggggcactactatgaacccatg
tcataccagggaccaatctacgcacatggggatggccctgcccccatcccaccgcaaggc
atgctggtccagccagagatgcaccttccccatcccggtctccatccccaccaatcaggg
ggcccgattgctaaccccgccctgtacggaggtcctcctgtttctctgtcaccagggcaa
ccacctcagcagctgctgccaccaccgttctaccctccaccaggcgttatgactttccca
tacccagccatgtacccaagtccacaaggtcagtcccaggtgacctatggtggtgtgacg
tactacgacacagtgcagcagcaggctcagcccaaaccttcgcctcccagacgtacgtct
cagcccgtcacagtcaagcccccccctccagaggtgccctttgcctcagagtga
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