Corynebacterium ulcerans 0102: CULC0102_0969
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Entry
CULC0102_0969 CDS
T02171
Name
(GenBank) hypothetical protein
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
cue
Corynebacterium ulcerans 0102
Pathway
cue03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cue00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CULC0102_0969
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cue03019
]
CULC0102_0969
03009 Ribosome biogenesis [BR:
cue03009
]
CULC0102_0969
Enzymes [BR:
cue01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CULC0102_0969
Messenger RNA biogenesis [BR:
cue03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CULC0102_0969
Ribosome biogenesis [BR:
cue03009
]
Prokaryotic type
rRNA helicases
CULC0102_0969
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
UvrA_inter
adh_short
Surface-like_ins_dom
Motif
Other DBs
NCBI-ProteinID:
BAM27168
LinkDB
All DBs
Position
1012453..1014477
Genome browser
AA seq
674 aa
AA seq
DB search
MSITDDATGGANEPDEKILSESQDNSQVDEGGITLDDVIADVDDSRVANTSEDTGSAQEA
DSDSNDGFEALGLPDAILKAVAKVGFETPSPIQAQTIPVLMEGHDVMGLAQTGTGKTAAF
ALPILSRINVKKRHPQALVLAPTRELALQVADSFQSFADHLGDIHVLPIYGGQAYGIQLS
GLRRGAQIIVGTPGRVIDHLEKGSLDISNLNYLVLDEADEMLSMGFQEDIERILEDTPAD
KQVALFSATMPNGIRRLSKQYMKDPREIQVKSETRTNTNITQRFLNVAHRNKLDALTRIL
EVTEFEAMIMFVRTKHETEEVAEKLRARGFSAAAINGDIAQAQRERTVDQLKDGRLDILV
ATDVAARGLDVERITHVFNYDIPNDTESYVHRIGRTGRAGRSGEAILFVTPRERRMLRSI
ERATNAELIEMDLPTVDEVNESRKAKFADSITESLEDSQVAIFRNLIKSYAEEHDTPLED
IAAALATQARAGSEFLMKEPPPEKRRERRDRFDRDDRRGDRRDRGERRDRGDRGSRFERS
GDMAVYRLAVGKRQHVRPGAIVGALANEGGLSNKDFGRITIAVDHTLVELPKGLPQSVFD
NLRDTRISGQLINIEKDNGRPGRRDDYRGGDDRRGGDRRDDRRGGYRRDRRDDRRDDRRG
DRRDRGDRRDRYRG
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atgagcattaccgatgacgccaccggcggcgctaacgagccggatgagaagattttgtcg
gaatctcaggacaattcgcaggtagacgaaggcggcatcacacttgatgatgttattgcc
gatgtagacgactccagggttgcgaacacttctgaggacaccggctccgcacaagaagcg
gacagtgacagtaacgatggctttgaggctttgggcctcccagacgcaatccttaaggca
gtcgccaaggttggctttgaaacgccgtcgcctattcaagcgcagaccatcccagtcctc
atggagggacacgatgtgatgggtctggcacagacgggtacgggtaagaccgctgcgttt
gccctcccgatcctttcccgtatcaatgtgaagaagcgccacccgcaggcgctggtcctt
gctcctactcgtgagcttgcacttcaggttgctgactctttccaatcatttgcagaccac
ctcggtgacattcatgtcctaccgatttacggtgggcaagcatatggtattcagctgtca
ggcctccgtcgtggtgcgcagattatcgtgggtactccaggtcgtgttattgaccacctg
gaaaagggatcactcgatatttccaacctgaactatctcgttcttgacgaggcagatgag
atgctcagcatgggcttccaggaagatattgagcgcattcttgaggacactcctgctgac
aagcaggttgctctgttctccgcaacgatgcctaatggcatccgtcgtttgagcaagcag
tacatgaaggatcctcgcgagattcaggtgaagtccgagacccggaccaacaccaacatc
acgcagcgattcctgaacgttgctcaccgcaacaagctagatgctttgactcgtatcctt
gaggttacagagtttgaagccatgatcatgttcgtgcgtacaaagcacgaaactgaagag
gtcgcagagaagctgcgagctcgtggtttctctgccgctgccatcaatggtgacatcgcg
caggcacagcgtgaacgtactgtggaccagcttaaagatggtcgactagacattcttgtg
gctacagacgtagcagcgcgtggtctagatgttgagcgtattactcacgtgttcaactac
gacattcctaatgacactgagtcttatgttcaccgtatcggacgtactggccgtgccgga
cgtagcggtgaggcgattctctttgttaccccacgcgagcgtcgtatgctgcgttccatc
gagcgcgctactaacgcagagctcatcgaaatggatcttcctacggtcgatgaggtcaac
gagtcccgtaaagcaaagtttgcagactcgattacggaatcgctagaagattcccaggtt
gcgattttccggaatctgatcaagtcctacgcagaagagcatgacactccgctcgaagac
attgctgctgctttggctacccaggcccgtgctggtagtgagttcttgatgaaggaaccg
ccaccagagaagcgtcgtgagcgtcgtgatcgctttgaccgtgatgatcgtcgtggtgac
cgccgcgatcgcggtgagcgtcgtgaccgcggtgaccgtggctctcgctttgagcgttcc
ggcgatatggctgtgtaccgccttgcggtgggcaagcgtcagcacgttcgaccaggtgct
atcgttggtgcactggcaaacgagggtggactcagcaacaaggactttggccgtatcacc
attgctgtggatcacactttggtggagcttcctaaggggcttccacaatccgtctttgat
aatctgcgcgacacccgtatctcgggtcagctgattaacatcgagaaggacaacggacgt
ccgggccgtcgcgatgactaccgtggtggcgacgaccgtcgcggtggagatcgcagagac
gaccgtcgtggtggctaccgtcgtgatcgcagggacgaccgccgtgatgatcgtcgtggc
gaccgtcgtgatcgcggtgatcgtcgtgaccgctaccgcggctag
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